RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
GINS3-206ENST00000567143 TROQ12816 1431 aaPredicted RBP9.28□□□□□ -0.92
GINS3-206ENST00000567143 ZMYM4Q5VZL5 1548 aa9.28□□□□□ -0.92
GINS3-206ENST00000567143 REREQ9P2R6 1566 aa9.28□□□□□ -0.92
GINS3-206ENST00000567143 PREX2Q70Z35 1606 aa9.27□□□□□ -0.92
GINS3-206ENST00000567143 KIF14Q15058 1648 aa9.27□□□□□ -0.93
GINS3-206ENST00000567143 FKBP8Q14318 412 aa9.27□□□□□ -0.93
GINS3-206ENST00000567143 EHBP1L1Q8N3D4 1523 aa9.27□□□□□ -0.93
GINS3-206ENST00000567143 CNGB1Q14028 1251 aaPredicted RBP9.26□□□□□ -0.93
GINS3-206ENST00000567143 BCORL1Q5H9F3 1711 aa9.26□□□□□ -0.93
GINS3-206ENST00000567143 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
GINS3-206ENST00000567143 MYO5CQ9NQX4 1742 aa9.26□□□□□ -0.93
GINS3-206ENST00000567143 TTC37Q6PGP7 1564 aa9.25□□□□□ -0.93
GINS3-206ENST00000567143 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
GINS3-206ENST00000567143 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
GINS3-206ENST00000567143 PLCH2O75038 1416 aa9.24□□□□□ -0.93
GINS3-206ENST00000567143 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
GINS3-206ENST00000567143 RICTORQ6R327 1708 aa9.23□□□□□ -0.93
GINS3-206ENST00000567143 FAM135AQ9P2D6 1515 aa9.23□□□□□ -0.93
GINS3-206ENST00000567143 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
GINS3-206ENST00000567143 CDC42BPAQ5VT25 1732 aa9.23□□□□□ -0.93
GINS3-206ENST00000567143 CDC42BPBQ9Y5S2 1711 aa9.23□□□□□ -0.93
GINS3-206ENST00000567143 KDM5CP41229 1560 aa9.23□□□□□ -0.93
GINS3-206ENST00000567143 ITSN2Q9NZM3 1697 aa9.22□□□□□ -0.93
GINS3-206ENST00000567143 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
GINS3-206ENST00000567143 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
GINS3-206ENST00000567143 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
GINS3-206ENST00000567143 RAB3GAP2Q9H2M9 1393 aa9.22□□□□□ -0.93
GINS3-206ENST00000567143 MAGI2Q86UL8 1455 aa9.21□□□□□ -0.94
GINS3-206ENST00000567143 CD109Q6YHK3 1445 aa9.21□□□□□ -0.94
GINS3-206ENST00000567143 KDM6BO15054 1643 aa9.2□□□□□ -0.94
GINS3-206ENST00000567143 KIAA1107Q9UPP5 1409 aa9.2□□□□□ -0.94
GINS3-206ENST00000567143 SUPT6HQ7KZ85 1726 aaKnown RBP9.2□□□□□ -0.94
GINS3-206ENST00000567143 ABCC1P33527 1531 aa9.19□□□□□ -0.94
GINS3-206ENST00000567143 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
GINS3-206ENST00000567143 LRRC9Q6ZRR7 1453 aa9.18□□□□□ -0.94
GINS3-206ENST00000567143 MYT1Q01538 1121 aa9.18□□□□□ -0.94
GINS3-206ENST00000567143 ARHGEF5Q12774 1597 aa9.18□□□□□ -0.94
GINS3-206ENST00000567143 MAST1Q9Y2H9 1570 aa9.18□□□□□ -0.94
GINS3-206ENST00000567143 PLEKHH2Q8IVE3 1493 aa9.17□□□□□ -0.94
GINS3-206ENST00000567143 GPATCH8Q9UKJ3 1502 aaKnown RBP9.17□□□□□ -0.94
GINS3-206ENST00000567143 NEFLP07196 543 aa9.16□□□□□ -0.94
GINS3-206ENST00000567143 CDK11AQ9UQ88 783 aaPredicted RBP9.16□□□□□ -0.94
GINS3-206ENST00000567143 ARHGEF40Q8TER5 1519 aa9.16□□□□□ -0.94
GINS3-206ENST00000567143 COL17A1Q9UMD9 1497 aaPredicted RBP9.16□□□□□ -0.94
GINS3-206ENST00000567143 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
GINS3-206ENST00000567143 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
GINS3-206ENST00000567143 PLEKHD1A6NEE1 506 aa9.15□□□□□ -0.94
GINS3-206ENST00000567143 MIA2Q96PC5 1412 aa9.15□□□□□ -0.94
GINS3-206ENST00000567143 SAMD9LQ8IVG5 1584 aa9.15□□□□□ -0.95
GINS3-206ENST00000567143 MLH3Q9UHC1 1453 aa9.15□□□□□ -0.95
GINS3-206ENST00000567143 INO80Q9ULG1 1556 aaPredicted RBP9.14□□□□□ -0.95
GINS3-206ENST00000567143 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
GINS3-206ENST00000567143 FANCAO15360 1455 aa9.14□□□□□ -0.95
GINS3-206ENST00000567143 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
GINS3-206ENST00000567143 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
GINS3-206ENST00000567143 AKNAQ7Z591 1439 aa9.14□□□□□ -0.95
GINS3-206ENST00000567143 AGLP35573 1532 aa9.13□□□□□ -0.95
GINS3-206ENST00000567143 ANP32CO43423 234 aa9.13□□□□□ -0.95
GINS3-206ENST00000567143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.12□□□□□ -0.95
GINS3-206ENST00000567143 TSPOAP1O95153 1857 aa9.12□□□□□ -0.95
GINS3-206ENST00000567143 RTEL1-TNFRSF6BF6WH68 1400 aa9.12□□□□□ -0.95
GINS3-206ENST00000567143 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
GINS3-206ENST00000567143 MBD5Q9P267 1494 aa9.11□□□□□ -0.95
GINS3-206ENST00000567143 CROCC2H7BZ55 1655 aa9.11□□□□□ -0.95
GINS3-206ENST00000567143 NCOA2Q15596 1464 aa9.11□□□□□ -0.95
GINS3-206ENST00000567143 ZNF518AQ6AHZ1 1483 aa9.11□□□□□ -0.95
GINS3-206ENST00000567143 SHANK2Q9UPX8 1470 aa9.11□□□□□ -0.95
GINS3-206ENST00000567143 HECW2Q9P2P5 1572 aa9.11□□□□□ -0.95
GINS3-206ENST00000567143 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
GINS3-206ENST00000567143 HNRNPUQ00839 825 aaKnown RBP eCLIP9.1□□□□□ -0.95
GINS3-206ENST00000567143 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
GINS3-206ENST00000567143 MROH2AA6NES4 1674 aa9.1□□□□□ -0.95
GINS3-206ENST00000567143 POLR3GLQ9BT43 218 aa9.1□□□□□ -0.95
GINS3-206ENST00000567143 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
GINS3-206ENST00000567143 ADAMTSL3P82987 1691 aa9.09□□□□□ -0.95
GINS3-206ENST00000567143 RRP7BPQ9NSQ0 103 aa9.09□□□□□ -0.95
GINS3-206ENST00000567143 SETD5Q9C0A6 1442 aa9.09□□□□□ -0.95
GINS3-206ENST00000567143 ADGBQ8N7X0 1667 aa9.09□□□□□ -0.96
GINS3-206ENST00000567143 EIF2AK4Q9P2K8 1649 aaKnown RBP9.08□□□□□ -0.96
GINS3-206ENST00000567143 KIDINS220Q9ULH0 1771 aa9.08□□□□□ -0.96
GINS3-206ENST00000567143 FOXD1Q16676 465 aa9.08□□□□□ -0.96
GINS3-206ENST00000567143 ANP32EQ9BTT0 268 aa9.08□□□□□ -0.96
GINS3-206ENST00000567143 ADGRL1O94910 1474 aa9.08□□□□□ -0.96
GINS3-206ENST00000567143 DIP2CQ9Y2E4 1556 aa9.07□□□□□ -0.96
GINS3-206ENST00000567143 ARHGAP5Q13017 1502 aa9.07□□□□□ -0.96
GINS3-206ENST00000567143 ZFYVE16Q7Z3T8 1539 aa9.07□□□□□ -0.96
GINS3-206ENST00000567143 TONSLQ96HA7 1378 aa9.07□□□□□ -0.96
GINS3-206ENST00000567143 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
GINS3-206ENST00000567143 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
GINS3-206ENST00000567143 DNMT1P26358 1616 aaKnown RBP9.06□□□□□ -0.96
GINS3-206ENST00000567143 PPP1R15AO75807 674 aaPredicted RBP9.06□□□□□ -0.96
GINS3-206ENST00000567143 RSPH4AQ5TD94 716 aa9.06□□□□□ -0.96
GINS3-206ENST00000567143 ABCA6Q8N139 1617 aa9.05□□□□□ -0.96
GINS3-206ENST00000567143 SIGLEC1Q9BZZ2 1709 aa9.05□□□□□ -0.96
GINS3-206ENST00000567143 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
GINS3-206ENST00000567143 ADGRL2O95490 1459 aa9.05□□□□□ -0.96
GINS3-206ENST00000567143 FAM9BQ8IZU0 186 aa9.05□□□□□ -0.96
GINS3-206ENST00000567143 RNF17Q9BXT8 1623 aaKnown RBP9.04□□□□□ -0.96
GINS3-206ENST00000567143 CAMSAP2Q08AD1 1489 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms