RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 LMOD2Q6P5Q4 547 aa8.19□□□□□ -1.1
CDH13-209ENST00000567109 SPAG9O60271 1321 aaKnown RBP8.19□□□□□ -1.1
CDH13-209ENST00000567109 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
CDH13-209ENST00000567109 NCLP19338 710 aaKnown RBP8.19□□□□□ -1.1
CDH13-209ENST00000567109 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
CDH13-209ENST00000567109 FAM69CQ0P6D2 419 aa8.18□□□□□ -1.1
CDH13-209ENST00000567109 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
CDH13-209ENST00000567109 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
CDH13-209ENST00000567109 TROQ12816 1431 aaPredicted RBP8.18□□□□□ -1.1
CDH13-209ENST00000567109 PLEKHH2Q8IVE3 1493 aa8.17□□□□□ -1.1
CDH13-209ENST00000567109 TONSLQ96HA7 1378 aa8.16□□□□□ -1.1
CDH13-209ENST00000567109 KIF21BO75037 1637 aa8.16□□□□□ -1.1
CDH13-209ENST00000567109 KRI1Q8N9T8 703 aaKnown RBP8.16□□□□□ -1.1
CDH13-209ENST00000567109 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
CDH13-209ENST00000567109 MYOM3Q5VTT5 1437 aa8.15□□□□□ -1.1
CDH13-209ENST00000567109 PHLDB1Q86UU1 1377 aa8.15□□□□□ -1.11
CDH13-209ENST00000567109 ISY1Q9ULR0 285 aaKnown RBP8.15□□□□□ -1.11
CDH13-209ENST00000567109 FYCO1Q9BQS8 1478 aa8.15□□□□□ -1.11
CDH13-209ENST00000567109 MIA2Q96PC5 1412 aa8.14□□□□□ -1.11
CDH13-209ENST00000567109 CASC1Q6TDU7 716 aa8.14□□□□□ -1.11
CDH13-209ENST00000567109 KDM2AQ9Y2K7 1162 aa8.14□□□□□ -1.11
CDH13-209ENST00000567109 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
CDH13-209ENST00000567109 PLB1Q6P1J6 1458 aa8.14□□□□□ -1.11
CDH13-209ENST00000567109 TRIM44Q96DX7 344 aaPredicted RBP8.14□□□□□ -1.11
CDH13-209ENST00000567109 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
CDH13-209ENST00000567109 TMX4Q9H1E5 349 aaPredicted RBP8.12□□□□□ -1.11
CDH13-209ENST00000567109 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
CDH13-209ENST00000567109 FAM9BQ8IZU0 186 aa8.12□□□□□ -1.11
CDH13-209ENST00000567109 ARAP1Q96P48 1450 aa8.11□□□□□ -1.11
CDH13-209ENST00000567109 SETD5Q9C0A6 1442 aa8.11□□□□□ -1.11
CDH13-209ENST00000567109 NAP1L2Q9ULW6 460 aaPredicted RBP8.1□□□□□ -1.11
CDH13-209ENST00000567109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDH13-209ENST00000567109 FGD6Q6ZV73 1430 aa8.09□□□□□ -1.11
CDH13-209ENST00000567109 KIF3BO15066 747 aa8.09□□□□□ -1.11
CDH13-209ENST00000567109 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDH13-209ENST00000567109 DDRGK1Q96HY6 314 aa8.09□□□□□ -1.11
CDH13-209ENST00000567109 HNRNPMP52272 730 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDH13-209ENST00000567109 FGD1P98174 961 aa8.08□□□□□ -1.12
CDH13-209ENST00000567109 STAC3Q96MF2 364 aa8.08□□□□□ -1.12
CDH13-209ENST00000567109 BIVM-ERCC5R4GMW8 1640 aa8.08□□□□□ -1.12
CDH13-209ENST00000567109 GGT6Q6P531 493 aa8.08□□□□□ -1.12
CDH13-209ENST00000567109 NCOA2Q15596 1464 aa8.08□□□□□ -1.12
CDH13-209ENST00000567109 OS9Q13438 667 aaPredicted RBP8.07□□□□□ -1.12
CDH13-209ENST00000567109 LAS1LQ9Y4W2 734 aaKnown RBP8.07□□□□□ -1.12
CDH13-209ENST00000567109 IQGAP2Q13576 1575 aa8.07□□□□□ -1.12
CDH13-209ENST00000567109 HNRNPUQ00839 825 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH13-209ENST00000567109 GOLGA6L22H0YM25 854 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 NUP155O75694 1391 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 PPP6R1Q9UPN7 881 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 LRRC9Q6ZRR7 1453 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 ADAMTS12P58397 1594 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 PTMAP06454 111 aaKnown RBP8.06□□□□□ -1.12
CDH13-209ENST00000567109 DNTTIP2Q5QJE6 756 aaKnown RBP8.06□□□□□ -1.12
CDH13-209ENST00000567109 MAP3K1Q13233 1512 aa8.06□□□□□ -1.12
CDH13-209ENST00000567109 GOLGA6L6A8MZA4 724 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 POGZQ7Z3K3 1410 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 CUL7Q14999 1698 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 BECN1Q14457 450 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 NBR1Q14596 966 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 FTSJ3Q8IY81 847 aaKnown RBP8.05□□□□□ -1.12
CDH13-209ENST00000567109 PKD2Q13563 968 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 UGGT2Q9NYU1 1516 aa8.05□□□□□ -1.12
CDH13-209ENST00000567109 CDCA8Q53HL2 280 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 KCNJ4P48050 445 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 EHBP1L1Q8N3D4 1523 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 G3V3G9 751 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 DCAF8Q5TAQ9 597 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 SCAPERQ9BY12 1400 aa8.04□□□□□ -1.12
CDH13-209ENST00000567109 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
CDH13-209ENST00000567109 EPRSP07814 1512 aaKnown RBP8.03□□□□□ -1.12
CDH13-209ENST00000567109 CFAP53Q96M91 514 aa8.03□□□□□ -1.12
CDH13-209ENST00000567109 CD109Q6YHK3 1445 aa8.03□□□□□ -1.12
CDH13-209ENST00000567109 AEBP2Q6ZN18 517 aaPredicted RBP8.03□□□□□ -1.12
CDH13-209ENST00000567109 MLECQ14165 292 aa8.03□□□□□ -1.12
CDH13-209ENST00000567109 KIAA2012Q0VF49 1180 aa8.02□□□□□ -1.13
CDH13-209ENST00000567109 CCDC9Q9Y3X0 531 aaKnown RBP8.02□□□□□ -1.13
CDH13-209ENST00000567109 TEX14Q8IWB6 1497 aa8.01□□□□□ -1.13
CDH13-209ENST00000567109 POGKQ9P215 609 aa8.01□□□□□ -1.13
CDH13-209ENST00000567109 FKBP8Q14318 412 aa8.01□□□□□ -1.13
CDH13-209ENST00000567109 RRBP1Q9P2E9 1410 aaKnown RBP8.01□□□□□ -1.13
CDH13-209ENST00000567109 KIF15Q9NS87 1388 aa8.01□□□□□ -1.13
CDH13-209ENST00000567109 ABCC2Q92887 1545 aa8□□□□□ -1.13
CDH13-209ENST00000567109 MPHOSPH9Q99550 1183 aa8□□□□□ -1.13
CDH13-209ENST00000567109 USP35Q9P2H5 1018 aa8□□□□□ -1.13
CDH13-209ENST00000567109 KIAA1107Q9UPP5 1409 aa8□□□□□ -1.13
CDH13-209ENST00000567109 UHRF1BP1LA0JNW5 1464 aa8□□□□□ -1.13
CDH13-209ENST00000567109 DCAF8L1A6NGE4 600 aa8□□□□□ -1.13
CDH13-209ENST00000567109 CCER2I3L3R5 266 aa8□□□□□ -1.13
CDH13-209ENST00000567109 DNAJC5Q9H3Z4 198 aa8□□□□□ -1.13
CDH13-209ENST00000567109 ANKRD50Q9ULJ7 1429 aa8□□□□□ -1.13
CDH13-209ENST00000567109 PLCH2O75038 1416 aa7.99□□□□□ -1.13
CDH13-209ENST00000567109 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
CDH13-209ENST00000567109 DENND4BO75064 1496 aaPredicted RBP7.99□□□□□ -1.13
CDH13-209ENST00000567109 GNL2Q13823 731 aaKnown RBP7.99□□□□□ -1.13
CDH13-209ENST00000567109 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH13-209ENST00000567109 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
CDH13-209ENST00000567109 NOC3LQ8WTT2 800 aaKnown RBP7.99□□□□□ -1.13
CDH13-209ENST00000567109 HECW1Q76N89 1606 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms