RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 PLCH2O75038 1416 aa31.8■■■□□ 2.68
RNF40-210ENST00000566811 CDC42BPBQ9Y5S2 1711 aa31.77■■■□□ 2.68
RNF40-210ENST00000566811 ADGRL1O94910 1474 aa31.76■■■□□ 2.67
RNF40-210ENST00000566811 FANCAO15360 1455 aa31.75■■■□□ 2.67
RNF40-210ENST00000566811 NCOA2Q15596 1464 aa31.74■■■□□ 2.67
RNF40-210ENST00000566811 ARHGAP5Q13017 1502 aa31.72■■■□□ 2.67
RNF40-210ENST00000566811 CCNB3Q8WWL7 1395 aa31.69■■■□□ 2.66
RNF40-210ENST00000566811 GPATCH8Q9UKJ3 1502 aaKnown RBP31.69■■■□□ 2.66
RNF40-210ENST00000566811 KANK4Q5T7N3 995 aaPredicted RBP31.64■■■□□ 2.66
RNF40-210ENST00000566811 EFCAB2Q5VUJ9 269 aa31.64■■■□□ 2.66
RNF40-210ENST00000566811 AKNAQ7Z591 1439 aa31.63■■■□□ 2.65
RNF40-210ENST00000566811 ILDR1Q86SU0 546 aaPredicted RBP31.59■■■□□ 2.65
RNF40-210ENST00000566811 PLEKHH2Q8IVE3 1493 aa31.59■■■□□ 2.65
RNF40-210ENST00000566811 ABCC1P33527 1531 aa31.58■■■□□ 2.65
RNF40-210ENST00000566811 RICTORQ6R327 1708 aa31.56■■■□□ 2.64
RNF40-210ENST00000566811 MYOM3Q5VTT5 1437 aa31.55■■■□□ 2.64
RNF40-210ENST00000566811 SAMD9LQ8IVG5 1584 aa31.55■■■□□ 2.64
RNF40-210ENST00000566811 MIA2Q96PC5 1412 aa31.53■■■□□ 2.64
RNF40-210ENST00000566811 CFDP1Q9UEE9 299 aaPredicted RBP31.53■■■□□ 2.64
RNF40-210ENST00000566811 DENND4BO75064 1496 aaPredicted RBP31.52■■■□□ 2.64
RNF40-210ENST00000566811 FRMPD1Q5SYB0 1578 aa31.49■■■□□ 2.63
RNF40-210ENST00000566811 POGZQ7Z3K3 1410 aa31.49■■■□□ 2.63
RNF40-210ENST00000566811 KIAA1107Q9UPP5 1409 aa31.49■■■□□ 2.63
RNF40-210ENST00000566811 ZNF518AQ6AHZ1 1483 aa31.47■■■□□ 2.63
RNF40-210ENST00000566811 ZMYM4Q5VZL5 1548 aa31.47■■■□□ 2.63
RNF40-210ENST00000566811 SCAPERQ9BY12 1400 aa31.47■■■□□ 2.63
RNF40-210ENST00000566811 HECW2Q9P2P5 1572 aa31.44■■■□□ 2.62
RNF40-210ENST00000566811 CAMSAP2Q08AD1 1489 aa31.44■■■□□ 2.62
RNF40-210ENST00000566811 SYCP2Q9BX26 1530 aa31.44■■■□□ 2.62
RNF40-210ENST00000566811 KDM5CP41229 1560 aa31.43■■■□□ 2.62
RNF40-210ENST00000566811 FGD6Q6ZV73 1430 aa31.4■■■□□ 2.62
RNF40-210ENST00000566811 MAGI2Q86UL8 1455 aa31.4■■■□□ 2.62
RNF40-210ENST00000566811 PTPN23Q9H3S7 1636 aa31.39■■■□□ 2.62
RNF40-210ENST00000566811 ARHGEF5Q12774 1597 aa31.38■■■□□ 2.61
RNF40-210ENST00000566811 ZNF777Q9ULD5 760 aaPredicted RBP31.37■■■□□ 2.61
RNF40-210ENST00000566811 ARHGEF12Q9NZN5 1544 aa31.35■■■□□ 2.61
RNF40-210ENST00000566811 TCOF1Q13428 1488 aaKnown RBP31.35■■■□□ 2.61
RNF40-210ENST00000566811 ARHGEF40Q8TER5 1519 aa31.34■■■□□ 2.61
RNF40-210ENST00000566811 RAPGEF3O95398 923 aa31.31■■■□□ 2.6
RNF40-210ENST00000566811 RSPH4AQ5TD94 716 aa31.31■■■□□ 2.6
RNF40-210ENST00000566811 CCDC141Q6ZP82 1450 aa31.31■■■□□ 2.6
RNF40-210ENST00000566811 MBD5Q9P267 1494 aa31.31■■■□□ 2.6
RNF40-210ENST00000566811 MLH3Q9UHC1 1453 aa31.29■■■□□ 2.6
RNF40-210ENST00000566811 TRAPPC8Q9Y2L5 1435 aa31.29■■■□□ 2.6
RNF40-210ENST00000566811 ZFYVE16Q7Z3T8 1539 aa31.29■■■□□ 2.6
RNF40-210ENST00000566811 INO80Q9ULG1 1556 aaPredicted RBP31.26■■■□□ 2.6
RNF40-210ENST00000566811 CROCC2H7BZ55 1655 aa31.25■■■□□ 2.59
RNF40-210ENST00000566811 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
RNF40-210ENST00000566811 DNMT1P26358 1616 aaKnown RBP31.24■■■□□ 2.59
RNF40-210ENST00000566811 KIDINS220Q9ULH0 1771 aa31.22■■■□□ 2.59
RNF40-210ENST00000566811 MAST1Q9Y2H9 1570 aa31.22■■■□□ 2.59
RNF40-210ENST00000566811 ATP7AQ04656 1500 aa31.21■■■□□ 2.59
RNF40-210ENST00000566811 HNRNPMP52272 730 aaKnown RBP eCLIP31.21■■■□□ 2.59
RNF40-210ENST00000566811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.2■■■□□ 2.59
RNF40-210ENST00000566811 SHANK2Q9UPX8 1470 aa31.2■■■□□ 2.58
RNF40-210ENST00000566811 RTEL1-TNFRSF6BF6WH68 1400 aa31.19■■■□□ 2.58
RNF40-210ENST00000566811 AFAP1Q8N556 730 aa31.19■■■□□ 2.58
RNF40-210ENST00000566811 REREQ9P2R6 1566 aa31.18■■■□□ 2.58
RNF40-210ENST00000566811 ABCA6Q8N139 1617 aa31.16■■■□□ 2.58
RNF40-210ENST00000566811 RRBP1Q9P2E9 1410 aaKnown RBP31.16■■■□□ 2.58
RNF40-210ENST00000566811 DIP2CQ9Y2E4 1556 aa31.16■■■□□ 2.58
RNF40-210ENST00000566811 SPAG9O60271 1321 aaKnown RBP31.16■■■□□ 2.58
RNF40-210ENST00000566811 ADGBQ8N7X0 1667 aa31.16■■■□□ 2.58
RNF40-210ENST00000566811 PPARGC1BQ86YN6 1023 aaKnown RBP31.15■■■□□ 2.58
RNF40-210ENST00000566811 PLXNC1O60486 1568 aa31.12■■■□□ 2.57
RNF40-210ENST00000566811 DAPK1P53355 1430 aa31.11■■■□□ 2.57
RNF40-210ENST00000566811 YEATS2Q9ULM3 1422 aa31.11■■■□□ 2.57
RNF40-210ENST00000566811 ATP10AO60312 1499 aa31.1■■■□□ 2.57
RNF40-210ENST00000566811 C9orf84Q5VXU9 1444 aa31.1■■■□□ 2.57
RNF40-210ENST00000566811 TSPY4P0CV99 314 aa31.1■■■□□ 2.57
RNF40-210ENST00000566811 TSPY10P0CW01 314 aa31.1■■■□□ 2.57
RNF40-210ENST00000566811 ABCC5O15440 1437 aa31.07■■■□□ 2.57
RNF40-210ENST00000566811 MYT1LQ9UL68 1186 aa31.06■■■□□ 2.56
RNF40-210ENST00000566811 ADAMTSL3P82987 1691 aa31.04■■■□□ 2.56
RNF40-210ENST00000566811 FAM50AQ14320 339 aaKnown RBP31.04■■■□□ 2.56
RNF40-210ENST00000566811 PTPRMP28827 1452 aa31.02■■■□□ 2.56
RNF40-210ENST00000566811 AGLP35573 1532 aa31.01■■■□□ 2.55
RNF40-210ENST00000566811 ADGRL2O95490 1459 aa30.99■■■□□ 2.55
RNF40-210ENST00000566811 A2MP01023 1474 aa30.97■■■□□ 2.55
RNF40-210ENST00000566811 BCORL1Q5H9F3 1711 aa30.96■■■□□ 2.55
RNF40-210ENST00000566811 SIGLEC1Q9BZZ2 1709 aa30.95■■■□□ 2.54
RNF40-210ENST00000566811 EIF2AK4Q9P2K8 1649 aaKnown RBP30.95■■■□□ 2.54
RNF40-210ENST00000566811 DUOX2Q9NRD8 1548 aa30.93■■■□□ 2.54
RNF40-210ENST00000566811 ANKRD30AQ9BXX3 1397 aa30.92■■■□□ 2.54
RNF40-210ENST00000566811 ARID4BQ4LE39 1312 aaPredicted RBP30.92■■■□□ 2.54
RNF40-210ENST00000566811 ROCK1Q13464 1354 aa30.9■■■□□ 2.54
RNF40-210ENST00000566811 DHX29Q7Z478 1369 aaKnown RBP30.89■■■□□ 2.54
RNF40-210ENST00000566811 FBXO41Q8TF61 875 aa30.88■■■□□ 2.53
RNF40-210ENST00000566811 MADDQ8WXG6 1647 aa30.87■■■□□ 2.53
RNF40-210ENST00000566811 KIF15Q9NS87 1388 aa30.87■■■□□ 2.53
RNF40-210ENST00000566811 NCOA1Q15788 1441 aa30.87■■■□□ 2.53
RNF40-210ENST00000566811 ERBINQ96RT1 1412 aa30.86■■■□□ 2.53
RNF40-210ENST00000566811 FAM135AQ9P2D6 1515 aa30.82■■■□□ 2.52
RNF40-210ENST00000566811 PTPRKQ15262 1439 aa30.81■■■□□ 2.52
RNF40-210ENST00000566811 RNF17Q9BXT8 1623 aaKnown RBP30.8■■■□□ 2.52
RNF40-210ENST00000566811 FER1L4A9Z1Z3 1794 aa30.8■■■□□ 2.52
RNF40-210ENST00000566811 GCC2Q8IWJ2 1684 aa30.78■■■□□ 2.52
RNF40-210ENST00000566811 LMTK3Q96Q04 1460 aa30.77■■■□□ 2.52
RNF40-210ENST00000566811 CHIC2Q9UKJ5 165 aa30.75■■■□□ 2.51
RNF40-210ENST00000566811 RIMS1Q86UR5 1692 aaKnown RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms