RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ZNF777Q9ULD5 760 aaPredicted RBP26.69■■□□□ 1.86
MSLN-207ENST00000566549 FOXD1Q16676 465 aa26.69■■□□□ 1.86
MSLN-207ENST00000566549 CFDP1Q9UEE9 299 aaPredicted RBP26.69■■□□□ 1.86
MSLN-207ENST00000566549 DENND4BO75064 1496 aaPredicted RBP26.68■■□□□ 1.86
MSLN-207ENST00000566549 MPHOSPH9Q99550 1183 aa26.67■■□□□ 1.86
MSLN-207ENST00000566549 KIF14Q15058 1648 aa26.63■■□□□ 1.85
MSLN-207ENST00000566549 KCNH8Q96L42 1107 aa26.63■■□□□ 1.85
MSLN-207ENST00000566549 DNMT1P26358 1616 aaKnown RBP26.62■■□□□ 1.85
MSLN-207ENST00000566549 ROCK1Q13464 1354 aa26.6■■□□□ 1.85
MSLN-207ENST00000566549 CAMSAP2Q08AD1 1489 aa26.6■■□□□ 1.85
MSLN-207ENST00000566549 GPATCH8Q9UKJ3 1502 aaKnown RBP26.6■■□□□ 1.85
MSLN-207ENST00000566549 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.85
MSLN-207ENST00000566549 KDM5BQ9UGL1 1544 aa26.56■■□□□ 1.84
MSLN-207ENST00000566549 ABCA8O94911 1581 aa26.54■■□□□ 1.84
MSLN-207ENST00000566549 ATP10BO94823 1461 aa26.53■■□□□ 1.84
MSLN-207ENST00000566549 SLC4A1APQ9BWU0 796 aaKnown RBP26.51■■□□□ 1.84
MSLN-207ENST00000566549 ITSN2Q9NZM3 1697 aa26.5■■□□□ 1.83
MSLN-207ENST00000566549 PTPRGP23470 1445 aa26.49■■□□□ 1.83
MSLN-207ENST00000566549 ADCY10Q96PN6 1610 aa26.49■■□□□ 1.83
MSLN-207ENST00000566549 L3MBTL2Q969R5 705 aa26.47■■□□□ 1.83
MSLN-207ENST00000566549 NCOA1Q15788 1441 aa26.46■■□□□ 1.83
MSLN-207ENST00000566549 ANKRD30BQ9BXX2 1392 aa26.43■■□□□ 1.82
MSLN-207ENST00000566549 ABCC10Q5T3U5 1492 aa26.41■■□□□ 1.82
MSLN-207ENST00000566549 CHD1O14646 1710 aa26.41■■□□□ 1.82
MSLN-207ENST00000566549 HSPA5P11021 654 aaKnown RBP26.39■■□□□ 1.82
MSLN-207ENST00000566549 ANP32CO43423 234 aa26.39■■□□□ 1.81
MSLN-207ENST00000566549 ANKRD30AQ9BXX3 1397 aa26.38■■□□□ 1.81
MSLN-207ENST00000566549 CDC42BPAQ5VT25 1732 aa26.36■■□□□ 1.81
MSLN-207ENST00000566549 PZPP20742 1482 aa26.36■■□□□ 1.81
MSLN-207ENST00000566549 RPRD2Q5VT52 1461 aaKnown RBP26.35■■□□□ 1.81
MSLN-207ENST00000566549 HNRNPMP52272 730 aaKnown RBP eCLIP26.35■■□□□ 1.81
MSLN-207ENST00000566549 ADGRL2O95490 1459 aa26.34■■□□□ 1.81
MSLN-207ENST00000566549 ADGBQ8N7X0 1667 aa26.34■■□□□ 1.81
MSLN-207ENST00000566549 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.8
MSLN-207ENST00000566549 C9orf84Q5VXU9 1444 aa26.32■■□□□ 1.8
MSLN-207ENST00000566549 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
MSLN-207ENST00000566549 EIF4G2P78344 907 aaKnown RBP eCLIP26.31■■□□□ 1.8
MSLN-207ENST00000566549 NBPF8Q3BBV2 869 aa26.31■■□□□ 1.8
MSLN-207ENST00000566549 TSPY4P0CV99 314 aa26.3■■□□□ 1.8
MSLN-207ENST00000566549 TSPY10P0CW01 314 aa26.3■■□□□ 1.8
MSLN-207ENST00000566549 PKD2Q13563 968 aa26.29■■□□□ 1.8
MSLN-207ENST00000566549 WASHC2AQ641Q2 1341 aa26.29■■□□□ 1.8
MSLN-207ENST00000566549 TEX14Q8IWB6 1497 aa26.28■■□□□ 1.8
MSLN-207ENST00000566549 ERCC6L2Q5T890 1561 aa26.28■■□□□ 1.8
MSLN-207ENST00000566549 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
MSLN-207ENST00000566549 CCER2I3L3R5 266 aa26.23■■□□□ 1.79
MSLN-207ENST00000566549 NUP155O75694 1391 aa26.23■■□□□ 1.79
MSLN-207ENST00000566549 SHANK2Q9UPX8 1470 aa26.22■■□□□ 1.79
MSLN-207ENST00000566549 KIF15Q9NS87 1388 aa26.21■■□□□ 1.79
MSLN-207ENST00000566549 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
MSLN-207ENST00000566549 ZNF326Q5BKZ1 582 aaKnown RBP26.2■■□□□ 1.79
MSLN-207ENST00000566549 C11orf95C9JLR9 678 aaPredicted RBP26.19■■□□□ 1.78
MSLN-207ENST00000566549 MBD5Q9P267 1494 aa26.19■■□□□ 1.78
MSLN-207ENST00000566549 SAMD9LQ8IVG5 1584 aa26.16■■□□□ 1.78
MSLN-207ENST00000566549 CCDC141Q6ZP82 1450 aa26.13■■□□□ 1.77
MSLN-207ENST00000566549 CDC42BPBQ9Y5S2 1711 aa26.13■■□□□ 1.77
MSLN-207ENST00000566549 TTC37Q6PGP7 1564 aa26.13■■□□□ 1.77
MSLN-207ENST00000566549 SUPT16HQ9Y5B9 1047 aaKnown RBP26.13■■□□□ 1.77
MSLN-207ENST00000566549 PREX2Q70Z35 1606 aa26.13■■□□□ 1.77
MSLN-207ENST00000566549 ABCC2Q92887 1545 aa26.12■■□□□ 1.77
MSLN-207ENST00000566549 ARHGAP5Q13017 1502 aa26.12■■□□□ 1.77
MSLN-207ENST00000566549 ARHGEF5Q12774 1597 aa26.12■■□□□ 1.77
MSLN-207ENST00000566549 PELP1Q8IZL8 1130 aaKnown RBP26.1■■□□□ 1.77
MSLN-207ENST00000566549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.1■■□□□ 1.77
MSLN-207ENST00000566549 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
MSLN-207ENST00000566549 CCDC7Q96M83 1385 aa26.08■■□□□ 1.77
MSLN-207ENST00000566549 CNTLNQ9NXG0 1405 aa26.05■■□□□ 1.76
MSLN-207ENST00000566549 SPATA31E1Q6ZUB1 1445 aa26.04■■□□□ 1.76
MSLN-207ENST00000566549 RSPH4AQ5TD94 716 aa26.04■■□□□ 1.76
MSLN-207ENST00000566549 KIF7Q2M1P5 1343 aa26.03■■□□□ 1.76
MSLN-207ENST00000566549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.02■■□□□ 1.76
MSLN-207ENST00000566549 CLASP1Q7Z460 1538 aa26.01■■□□□ 1.76
MSLN-207ENST00000566549 KDM2AQ9Y2K7 1162 aa26■■□□□ 1.75
MSLN-207ENST00000566549 KDM5DQ9BY66 1539 aa26■■□□□ 1.75
MSLN-207ENST00000566549 POLR3GLQ9BT43 218 aa25.99■■□□□ 1.75
MSLN-207ENST00000566549 USP47Q96K76 1375 aa25.97■■□□□ 1.75
MSLN-207ENST00000566549 FAM135AQ9P2D6 1515 aa25.95■■□□□ 1.75
MSLN-207ENST00000566549 ZCCHC11Q5TAX3 1644 aaKnown RBP25.95■■□□□ 1.74
MSLN-207ENST00000566549 CCDC184Q52MB2 194 aa25.94■■□□□ 1.74
MSLN-207ENST00000566549 DCAF11Q8TEB1 546 aa25.94■■□□□ 1.74
MSLN-207ENST00000566549 MYO5CQ9NQX4 1742 aa25.94■■□□□ 1.74
MSLN-207ENST00000566549 ARHGEF12Q9NZN5 1544 aa25.93■■□□□ 1.74
MSLN-207ENST00000566549 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
MSLN-207ENST00000566549 CNGB1Q14028 1251 aaPredicted RBP25.92■■□□□ 1.74
MSLN-207ENST00000566549 PRKRIP1Q9H875 184 aaPredicted RBP25.92■■□□□ 1.74
MSLN-207ENST00000566549 CARD11Q9BXL7 1154 aa25.9■■□□□ 1.74
MSLN-207ENST00000566549 PLCH2O75038 1416 aa25.9■■□□□ 1.74
MSLN-207ENST00000566549 PLEKHH2Q8IVE3 1493 aa25.9■■□□□ 1.74
MSLN-207ENST00000566549 EFCAB2Q5VUJ9 269 aa25.89■■□□□ 1.74
MSLN-207ENST00000566549 BCANQ96GW7 911 aa25.89■■□□□ 1.74
MSLN-207ENST00000566549 FKBP8Q14318 412 aa25.88■■□□□ 1.73
MSLN-207ENST00000566549 UHRF1BP1LA0JNW5 1464 aa25.88■■□□□ 1.73
MSLN-207ENST00000566549 MAST1Q9Y2H9 1570 aa25.87■■□□□ 1.73
MSLN-207ENST00000566549 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
MSLN-207ENST00000566549 RGL3Q3MIN7 710 aa25.86■■□□□ 1.73
MSLN-207ENST00000566549 RALGAPBQ86X10 1494 aa25.84■■□□□ 1.73
MSLN-207ENST00000566549 CCDC144AA2RUR9 1427 aa25.84■■□□□ 1.73
MSLN-207ENST00000566549 TRAPPC8Q9Y2L5 1435 aa25.83■■□□□ 1.72
MSLN-207ENST00000566549 KDM5CP41229 1560 aa25.82■■□□□ 1.72
MSLN-207ENST00000566549 MRS2Q9HD23 443 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms