RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
FANCA-220ENST00000566409 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
FANCA-220ENST00000566409 ADAMTSL3P82987 1691 aa23.67■■□□□ 1.38
FANCA-220ENST00000566409 ARHGAP5Q13017 1502 aa23.66■■□□□ 1.38
FANCA-220ENST00000566409 YEATS2Q9ULM3 1422 aa23.66■■□□□ 1.38
FANCA-220ENST00000566409 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
FANCA-220ENST00000566409 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.38
FANCA-220ENST00000566409 PREX2Q70Z35 1606 aa23.64■■□□□ 1.38
FANCA-220ENST00000566409 BCORL1Q5H9F3 1711 aa23.64■■□□□ 1.37
FANCA-220ENST00000566409 CDC42BPAQ5VT25 1732 aa23.63■■□□□ 1.37
FANCA-220ENST00000566409 ZFYVE16Q7Z3T8 1539 aa23.63■■□□□ 1.37
FANCA-220ENST00000566409 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
FANCA-220ENST00000566409 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
FANCA-220ENST00000566409 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
FANCA-220ENST00000566409 MADDQ8WXG6 1647 aa23.57■■□□□ 1.36
FANCA-220ENST00000566409 ARHGEF12Q9NZN5 1544 aa23.57■■□□□ 1.36
FANCA-220ENST00000566409 KDM5CP41229 1560 aa23.56■■□□□ 1.36
FANCA-220ENST00000566409 PTPRMP28827 1452 aa23.56■■□□□ 1.36
FANCA-220ENST00000566409 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
FANCA-220ENST00000566409 ABCC1P33527 1531 aa23.54■■□□□ 1.36
FANCA-220ENST00000566409 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
FANCA-220ENST00000566409 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
FANCA-220ENST00000566409 TRAPPC8Q9Y2L5 1435 aa23.52■■□□□ 1.36
FANCA-220ENST00000566409 ITSN2Q9NZM3 1697 aa23.52■■□□□ 1.36
FANCA-220ENST00000566409 ATP10AO60312 1499 aa23.52■■□□□ 1.36
FANCA-220ENST00000566409 MTUS2Q5JR59 1369 aa23.5■■□□□ 1.35
FANCA-220ENST00000566409 SAMD9LQ8IVG5 1584 aa23.49■■□□□ 1.35
FANCA-220ENST00000566409 RIMS1Q86UR5 1692 aaKnown RBP23.48■■□□□ 1.35
FANCA-220ENST00000566409 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
FANCA-220ENST00000566409 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
FANCA-220ENST00000566409 DIP2CQ9Y2E4 1556 aa23.46■■□□□ 1.35
FANCA-220ENST00000566409 ZNF777Q9ULD5 760 aaPredicted RBP23.45■■□□□ 1.34
FANCA-220ENST00000566409 EHBP1L1Q8N3D4 1523 aa23.44■■□□□ 1.34
FANCA-220ENST00000566409 CCNB3Q8WWL7 1395 aa23.44■■□□□ 1.34
FANCA-220ENST00000566409 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
FANCA-220ENST00000566409 MLECQ14165 292 aa23.43■■□□□ 1.34
FANCA-220ENST00000566409 KIDINS220Q9ULH0 1771 aa23.42■■□□□ 1.34
FANCA-220ENST00000566409 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
FANCA-220ENST00000566409 SYCP2Q9BX26 1530 aa23.42■■□□□ 1.34
FANCA-220ENST00000566409 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
FANCA-220ENST00000566409 VPS8Q8N3P4 1428 aa23.41■■□□□ 1.34
FANCA-220ENST00000566409 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
FANCA-220ENST00000566409 HNRNPMP52272 730 aaKnown RBP eCLIP23.4■■□□□ 1.345e-10■■□□□ 13.5
FANCA-220ENST00000566409 MYT1LQ9UL68 1186 aa23.4■■□□□ 1.34
FANCA-220ENST00000566409 REREQ9P2R6 1566 aa23.39■■□□□ 1.33
FANCA-220ENST00000566409 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
FANCA-220ENST00000566409 ZNF644Q9H582 1327 aaPredicted RBP23.36■■□□□ 1.33
FANCA-220ENST00000566409 PLEKHH2Q8IVE3 1493 aa23.34■■□□□ 1.33
FANCA-220ENST00000566409 NCOA2Q15596 1464 aa23.33■■□□□ 1.33
FANCA-220ENST00000566409 SUPT6HQ7KZ85 1726 aaKnown RBP23.33■■□□□ 1.32
FANCA-220ENST00000566409 PLPPR3Q6T4P5 718 aa23.32■■□□□ 1.32
FANCA-220ENST00000566409 AGLP35573 1532 aa23.31■■□□□ 1.32
FANCA-220ENST00000566409 SPAG9O60271 1321 aaKnown RBP23.31■■□□□ 1.32
FANCA-220ENST00000566409 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
FANCA-220ENST00000566409 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
FANCA-220ENST00000566409 INO80Q9ULG1 1556 aaPredicted RBP23.29■■□□□ 1.32
FANCA-220ENST00000566409 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
FANCA-220ENST00000566409 ATP7AQ04656 1500 aa23.28■■□□□ 1.32
FANCA-220ENST00000566409 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
FANCA-220ENST00000566409 CEBPAP49715 358 aaPredicted RBP23.26■■□□□ 1.31
FANCA-220ENST00000566409 MAP3K1Q13233 1512 aa23.26■■□□□ 1.31
FANCA-220ENST00000566409 CAMSAP2Q08AD1 1489 aa23.21■■□□□ 1.31
FANCA-220ENST00000566409 PLXNC1O60486 1568 aa23.21■■□□□ 1.31
FANCA-220ENST00000566409 HSPA2P54652 639 aa23.19■■□□□ 1.3
FANCA-220ENST00000566409 C3P01024 1663 aa23.19■■□□□ 1.3
FANCA-220ENST00000566409 A2MP01023 1474 aa23.18■■□□□ 1.3
FANCA-220ENST00000566409 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
FANCA-220ENST00000566409 SETD1BQ9UPS6 1966 aaKnown RBP23.16■■□□□ 1.3
FANCA-220ENST00000566409 RTEL1-TNFRSF6BF6WH68 1400 aa23.16■■□□□ 1.3
FANCA-220ENST00000566409 PREX1Q8TCU6 1659 aa23.14■■□□□ 1.29
FANCA-220ENST00000566409 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.29
FANCA-220ENST00000566409 ARHGEF5Q12774 1597 aa23.12■■□□□ 1.29
FANCA-220ENST00000566409 RSPH4AQ5TD94 716 aa23.1■■□□□ 1.29
FANCA-220ENST00000566409 ESF1Q9H501 851 aaKnown RBP23.1■■□□□ 1.29
FANCA-220ENST00000566409 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
FANCA-220ENST00000566409 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
FANCA-220ENST00000566409 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
FANCA-220ENST00000566409 DHX29Q7Z478 1369 aaKnown RBP23.08■■□□□ 1.29
FANCA-220ENST00000566409 CLTCQ00610 1675 aaKnown RBP23.07■■□□□ 1.28
FANCA-220ENST00000566409 GGT6Q6P531 493 aa23.06■■□□□ 1.28
FANCA-220ENST00000566409 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
FANCA-220ENST00000566409 ZMYM3Q14202 1370 aa23.05■■□□□ 1.28
FANCA-220ENST00000566409 APLP2Q06481 763 aa23.04■■□□□ 1.28
FANCA-220ENST00000566409 ILDR1Q86SU0 546 aaPredicted RBP23.03■■□□□ 1.28
FANCA-220ENST00000566409 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
FANCA-220ENST00000566409 TSPY4P0CV99 314 aa23.01■■□□□ 1.27
FANCA-220ENST00000566409 TSPY10P0CW01 314 aa23.01■■□□□ 1.27
FANCA-220ENST00000566409 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
FANCA-220ENST00000566409 STRCQ7RTU9 1775 aa23■■□□□ 1.27
FANCA-220ENST00000566409 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
FANCA-220ENST00000566409 KIF3BO15066 747 aa22.98■■□□□ 1.27
FANCA-220ENST00000566409 NPATQ14207 1427 aa22.98■■□□□ 1.27
FANCA-220ENST00000566409 PTPN23Q9H3S7 1636 aa22.96■■□□□ 1.27
FANCA-220ENST00000566409 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
FANCA-220ENST00000566409 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
FANCA-220ENST00000566409 ABCC5O15440 1437 aa22.91■■□□□ 1.26
FANCA-220ENST00000566409 CROCC2H7BZ55 1655 aa22.9■■□□□ 1.26
FANCA-220ENST00000566409 TCOF1Q13428 1488 aaKnown RBP22.9■■□□□ 1.26
FANCA-220ENST00000566409 MYO3AQ8NEV4 1616 aa22.89■■□□□ 1.25
FANCA-220ENST00000566409 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms