RNA–Protein interactions for RNA: ENST00000566101.1

LINC01477-201, Transcript of long intergenic non-protein coding RNA 1477, humanhuman

TSL 1 (best) BASIC

Gene LINC01477, Length 1,226 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01477-201ENST00000566101 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
LINC01477-201ENST00000566101 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
LINC01477-201ENST00000566101 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
LINC01477-201ENST00000566101 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
LINC01477-201ENST00000566101 C2orf72A6NCS6 295 aa16.19■□□□□ 0.18
LINC01477-201ENST00000566101 KIF3CO14782 793 aa16.17■□□□□ 0.18
LINC01477-201ENST00000566101 LHX8Q68G74 356 aa16.17■□□□□ 0.18
LINC01477-201ENST00000566101 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
LINC01477-201ENST00000566101 PDE4AP27815 886 aa16.15■□□□□ 0.18
LINC01477-201ENST00000566101 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.15■□□□□ 0.18
LINC01477-201ENST00000566101 OTUD5Q96G74 571 aa16.14■□□□□ 0.17
LINC01477-201ENST00000566101 DSG2Q14126 1118 aa16.13■□□□□ 0.17
LINC01477-201ENST00000566101 TMC2Q8TDI7 906 aa16.13■□□□□ 0.17
LINC01477-201ENST00000566101 MFSD10Q14728 455 aa16.11■□□□□ 0.17
LINC01477-201ENST00000566101 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.16
LINC01477-201ENST00000566101 SCUBE2Q9NQ36 999 aa16.08■□□□□ 0.16
LINC01477-201ENST00000566101 PPP1R15BQ5SWA1 713 aa16.06■□□□□ 0.16
LINC01477-201ENST00000566101 MAMSTRQ6ZN01 415 aa16.06■□□□□ 0.16
LINC01477-201ENST00000566101 SLAIN1Q8ND83 568 aa16.06■□□□□ 0.16
LINC01477-201ENST00000566101 FOXK1P85037 733 aa16.05■□□□□ 0.16
LINC01477-201ENST00000566101 WDR70Q9NW82 654 aa16.05■□□□□ 0.16
LINC01477-201ENST00000566101 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
LINC01477-201ENST00000566101 KCNV2Q8TDN2 545 aa15.97■□□□□ 0.15
LINC01477-201ENST00000566101 E2F4Q16254 413 aa15.95■□□□□ 0.14
LINC01477-201ENST00000566101 EMILIN3Q9NT22 766 aa15.95■□□□□ 0.14
LINC01477-201ENST00000566101 CAMK2BQ13554 666 aa15.94■□□□□ 0.14
LINC01477-201ENST00000566101 HOXB3P14651 431 aaPredicted RBP15.89■□□□□ 0.13
LINC01477-201ENST00000566101 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC01477-201ENST00000566101 DPYSL4O14531 572 aa15.81■□□□□ 0.12
LINC01477-201ENST00000566101 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
LINC01477-201ENST00000566101 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
LINC01477-201ENST00000566101 SLC34A2O95436 690 aa15.78■□□□□ 0.12
LINC01477-201ENST00000566101 PTCD2Q8WV60 388 aaKnown RBP15.77■□□□□ 0.12
LINC01477-201ENST00000566101 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
LINC01477-201ENST00000566101 KHSRPQ92945 711 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC01477-201ENST00000566101 ARIH1Q9Y4X5 557 aaPredicted RBP15.75■□□□□ 0.11
LINC01477-201ENST00000566101 PCDHGA4Q9Y5G9 962 aa15.74■□□□□ 0.11
LINC01477-201ENST00000566101 DOK7Q18PE1 504 aa15.73■□□□□ 0.11
LINC01477-201ENST00000566101 ARSIQ5FYB1 569 aa15.72■□□□□ 0.11
LINC01477-201ENST00000566101 MAP3K9P80192 1104 aa15.71■□□□□ 0.11
LINC01477-201ENST00000566101 GPR153Q6NV75 609 aa15.7■□□□□ 0.1
LINC01477-201ENST00000566101 SNPHO15079 494 aa15.67■□□□□ 0.1
LINC01477-201ENST00000566101 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
LINC01477-201ENST00000566101 SEMA3EO15041 775 aa15.66■□□□□ 0.1
LINC01477-201ENST00000566101 ZNF710Q8N1W2 664 aa15.66■□□□□ 0.1
LINC01477-201ENST00000566101 EVI5O60447 810 aa15.64■□□□□ 0.09
LINC01477-201ENST00000566101 PDIA6Q15084 440 aa15.64■□□□□ 0.09
LINC01477-201ENST00000566101 NUDT7P0C024 238 aa15.63■□□□□ 0.09
LINC01477-201ENST00000566101 ST18O60284 1047 aa15.62■□□□□ 0.09
LINC01477-201ENST00000566101 RIMBP2O15034 1052 aa15.61■□□□□ 0.09
LINC01477-201ENST00000566101 TBC1D12O60347 775 aa15.61■□□□□ 0.09
LINC01477-201ENST00000566101 LCE2DQ5TA82 110 aaPredicted RBP15.61■□□□□ 0.09
LINC01477-201ENST00000566101 FAM163AQ96GL9 167 aaPredicted RBP15.61■□□□□ 0.09
LINC01477-201ENST00000566101 NBR1Q14596 966 aa15.6■□□□□ 0.09
LINC01477-201ENST00000566101 ZSWIM6Q9HCJ5 1215 aa15.6■□□□□ 0.09
LINC01477-201ENST00000566101 MLLT3P42568 568 aaPredicted RBP15.59■□□□□ 0.09
LINC01477-201ENST00000566101 HOXB1P14653 301 aaPredicted RBP15.58■□□□□ 0.08
LINC01477-201ENST00000566101 BCANQ96GW7 911 aa15.58■□□□□ 0.08
LINC01477-201ENST00000566101 SPDYE16A6NNV3 312 aaPredicted RBP15.57■□□□□ 0.08
LINC01477-201ENST00000566101 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
LINC01477-201ENST00000566101 TESPA1A2RU30 521 aaPredicted RBP15.54■□□□□ 0.08
LINC01477-201ENST00000566101 DDX12PQ92771 950 aa15.53■□□□□ 0.08
LINC01477-201ENST00000566101 MARVELD3Q96A59 401 aa15.53■□□□□ 0.08
LINC01477-201ENST00000566101 LHX6Q9UPM6 363 aa15.51■□□□□ 0.07
LINC01477-201ENST00000566101 GRXCR2A6NFK2 248 aa15.49■□□□□ 0.07
LINC01477-201ENST00000566101 PTGER2P43116 358 aa15.48■□□□□ 0.07
LINC01477-201ENST00000566101 PRIM1P49642 420 aaKnown RBP15.47■□□□□ 0.07
LINC01477-201ENST00000566101 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
LINC01477-201ENST00000566101 PCDHGA10Q9Y5H3 936 aa15.43■□□□□ 0.06
LINC01477-201ENST00000566101 POTEB3A0JP26 581 aa15.41■□□□□ 0.06
LINC01477-201ENST00000566101 OSBPP22059 807 aa15.41■□□□□ 0.06
LINC01477-201ENST00000566101 FOSBP53539 338 aa15.41■□□□□ 0.06
LINC01477-201ENST00000566101 POTEBQ6S5H4 581 aa15.41■□□□□ 0.06
LINC01477-201ENST00000566101 EMP3P54852 163 aa15.4■□□□□ 0.06
LINC01477-201ENST00000566101 ZNF454Q8N9F8 522 aa15.4■□□□□ 0.06
LINC01477-201ENST00000566101 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
LINC01477-201ENST00000566101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.38■□□□□ 0.05
LINC01477-201ENST00000566101 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
LINC01477-201ENST00000566101 FAM205CA6NFA0 338 aa15.36■□□□□ 0.05
LINC01477-201ENST00000566101 PHF14O94880 888 aa15.36■□□□□ 0.05
LINC01477-201ENST00000566101 VARS2Q5ST30 1063 aaKnown RBP15.36■□□□□ 0.05
LINC01477-201ENST00000566101 ERBB3P21860 1342 aa15.36■□□□□ 0.05
LINC01477-201ENST00000566101 RBM33Q96EV2 1170 aaKnown RBP15.35■□□□□ 0.05
LINC01477-201ENST00000566101 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
LINC01477-201ENST00000566101 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
LINC01477-201ENST00000566101 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
LINC01477-201ENST00000566101 SMYD5Q6GMV2 418 aa15.3■□□□□ 0.04
LINC01477-201ENST00000566101 ZDHHC16Q969W1 377 aa15.3■□□□□ 0.04
LINC01477-201ENST00000566101 EPAS1Q99814 870 aa15.3■□□□□ 0.04
LINC01477-201ENST00000566101 TSR1Q2NL82 804 aaKnown RBP15.29■□□□□ 0.04
LINC01477-201ENST00000566101 HS3ST6Q96QI5 342 aa15.29■□□□□ 0.04
LINC01477-201ENST00000566101 EN1Q05925 392 aaPredicted RBP15.28■□□□□ 0.04
LINC01477-201ENST00000566101 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.04
LINC01477-201ENST00000566101 CDHR5Q9HBB8 845 aa15.27■□□□□ 0.04
LINC01477-201ENST00000566101 POTEEQ6S8J3 1075 aa15.26■□□□□ 0.03
LINC01477-201ENST00000566101 ABCC9O60706 1549 aa15.26■□□□□ 0.03
LINC01477-201ENST00000566101 MAP3K7O43318 606 aa15.25■□□□□ 0.03
LINC01477-201ENST00000566101 PSDA5PKW4 1024 aaPredicted RBP15.24■□□□□ 0.03
LINC01477-201ENST00000566101 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
LINC01477-201ENST00000566101 NUTM2FA1L443 756 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms