RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 TMEM92Q6UXU6 159 aa11.74□□□□□ -0.53
CCNDBP1-207ENST00000565958 SOX12O15370 315 aa11.72□□□□□ -0.53
CCNDBP1-207ENST00000565958 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
CCNDBP1-207ENST00000565958 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
CCNDBP1-207ENST00000565958 ANKRD13DQ6ZTN6 518 aa11.63□□□□□ -0.55
CCNDBP1-207ENST00000565958 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
CCNDBP1-207ENST00000565958 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
CCNDBP1-207ENST00000565958 PHF8Q9UPP1 1060 aa11.61□□□□□ -0.55
CCNDBP1-207ENST00000565958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
CCNDBP1-207ENST00000565958 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
CCNDBP1-207ENST00000565958 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
CCNDBP1-207ENST00000565958 LSM11P83369 360 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCNDBP1-207ENST00000565958 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
CCNDBP1-207ENST00000565958 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCNDBP1-207ENST00000565958 NLRP6P59044 892 aa11.53□□□□□ -0.56
CCNDBP1-207ENST00000565958 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
CCNDBP1-207ENST00000565958 PBX2P40425 430 aa11.52□□□□□ -0.57
CCNDBP1-207ENST00000565958 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
CCNDBP1-207ENST00000565958 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
CCNDBP1-207ENST00000565958 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
CCNDBP1-207ENST00000565958 KIF3CO14782 793 aa11.44□□□□□ -0.58
CCNDBP1-207ENST00000565958 NUDT7P0C024 238 aa11.44□□□□□ -0.58
CCNDBP1-207ENST00000565958 PLA2G2EQ9NZK7 142 aa11.43□□□□□ -0.58
CCNDBP1-207ENST00000565958 HCSTQ9UBK5 93 aa11.43□□□□□ -0.58
CCNDBP1-207ENST00000565958 C2orf72A6NCS6 295 aa11.42□□□□□ -0.58
CCNDBP1-207ENST00000565958 SLC34A2O95436 690 aa11.41□□□□□ -0.58
CCNDBP1-207ENST00000565958 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
CCNDBP1-207ENST00000565958 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
CCNDBP1-207ENST00000565958 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
CCNDBP1-207ENST00000565958 PKD2Q13563 968 aa11.4□□□□□ -0.58
CCNDBP1-207ENST00000565958 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
CCNDBP1-207ENST00000565958 POTEEQ6S8J3 1075 aa11.39□□□□□ -0.59
CCNDBP1-207ENST00000565958 PCDHGA4Q9Y5G9 962 aa11.39□□□□□ -0.59
CCNDBP1-207ENST00000565958 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
CCNDBP1-207ENST00000565958 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
CCNDBP1-207ENST00000565958 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
CCNDBP1-207ENST00000565958 ARHGAP33O14559 1287 aa11.34□□□□□ -0.59
CCNDBP1-207ENST00000565958 ADGRD1Q6QNK2 874 aa11.34□□□□□ -0.59
CCNDBP1-207ENST00000565958 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
CCNDBP1-207ENST00000565958 TK2O00142 265 aa11.29□□□□□ -0.6
CCNDBP1-207ENST00000565958 STK25O00506 426 aa11.29□□□□□ -0.6
CCNDBP1-207ENST00000565958 BCANQ96GW7 911 aa11.25□□□□□ -0.61
CCNDBP1-207ENST00000565958 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
CCNDBP1-207ENST00000565958 HRO43593 1189 aa11.23□□□□□ -0.61
CCNDBP1-207ENST00000565958 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
CCNDBP1-207ENST00000565958 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
CCNDBP1-207ENST00000565958 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
CCNDBP1-207ENST00000565958 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
CCNDBP1-207ENST00000565958 PTCD2Q8WV60 388 aaKnown RBP11.2□□□□□ -0.62
CCNDBP1-207ENST00000565958 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
CCNDBP1-207ENST00000565958 PSEN2P49810 448 aa11.19□□□□□ -0.62
CCNDBP1-207ENST00000565958 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CCNDBP1-207ENST00000565958 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
CCNDBP1-207ENST00000565958 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
CCNDBP1-207ENST00000565958 KCNH8Q96L42 1107 aa11.13□□□□□ -0.63
CCNDBP1-207ENST00000565958 TBC1D12O60347 775 aa11.12□□□□□ -0.63
CCNDBP1-207ENST00000565958 PPP1R37O75864 691 aa11.12□□□□□ -0.63
CCNDBP1-207ENST00000565958 FOXK1P85037 733 aa11.12□□□□□ -0.63
CCNDBP1-207ENST00000565958 RGS20O76081 388 aa11.11□□□□□ -0.63
CCNDBP1-207ENST00000565958 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
CCNDBP1-207ENST00000565958 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
CCNDBP1-207ENST00000565958 RGL2O15211 777 aa11.08□□□□□ -0.64
CCNDBP1-207ENST00000565958 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
CCNDBP1-207ENST00000565958 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
CCNDBP1-207ENST00000565958 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
CCNDBP1-207ENST00000565958 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
CCNDBP1-207ENST00000565958 PTPN5P54829 565 aa11.05□□□□□ -0.64
CCNDBP1-207ENST00000565958 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
CCNDBP1-207ENST00000565958 KDM2AQ9Y2K7 1162 aa11.05□□□□□ -0.64
CCNDBP1-207ENST00000565958 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
CCNDBP1-207ENST00000565958 DSG2Q14126 1118 aa11.02□□□□□ -0.65
CCNDBP1-207ENST00000565958 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
CCNDBP1-207ENST00000565958 IRX2Q9BZI1 471 aaPredicted RBP11.01□□□□□ -0.65
CCNDBP1-207ENST00000565958 SPRYD3Q8NCJ5 442 aa11□□□□□ -0.65
CCNDBP1-207ENST00000565958 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
CCNDBP1-207ENST00000565958 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
CCNDBP1-207ENST00000565958 A0A0G2JS52 829 aa10.96□□□□□ -0.65
CCNDBP1-207ENST00000565958 ZNF454Q8N9F8 522 aa10.96□□□□□ -0.65
CCNDBP1-207ENST00000565958 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
CCNDBP1-207ENST00000565958 BHMG1C9JSJ3 638 aaPredicted RBP10.95□□□□□ -0.66
CCNDBP1-207ENST00000565958 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
CCNDBP1-207ENST00000565958 OXER1Q8TDS5 423 aa10.95□□□□□ -0.66
CCNDBP1-207ENST00000565958 PTPREP23469 700 aa10.92□□□□□ -0.66
CCNDBP1-207ENST00000565958 WNT2BQ93097 391 aa10.92□□□□□ -0.66
CCNDBP1-207ENST00000565958 TSHZ2Q9NRE2 1034 aa10.92□□□□□ -0.66
CCNDBP1-207ENST00000565958 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
CCNDBP1-207ENST00000565958 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
CCNDBP1-207ENST00000565958 FOSBP53539 338 aa10.9□□□□□ -0.66
CCNDBP1-207ENST00000565958 UPF1Q92900 1129 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCNDBP1-207ENST00000565958 ZBED2Q9BTP6 218 aa10.9□□□□□ -0.66
CCNDBP1-207ENST00000565958 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
CCNDBP1-207ENST00000565958 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
CCNDBP1-207ENST00000565958 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
CCNDBP1-207ENST00000565958 ANO8Q9HCE9 1232 aaPredicted RBP10.83□□□□□ -0.68
CCNDBP1-207ENST00000565958 ZDHHC16Q969W1 377 aa10.82□□□□□ -0.68
CCNDBP1-207ENST00000565958 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
CCNDBP1-207ENST00000565958 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
CCNDBP1-207ENST00000565958 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
CCNDBP1-207ENST00000565958 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
CCNDBP1-207ENST00000565958 ITGBL1O95965 494 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms