RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 MYO5CQ9NQX4 1742 aa23.65■■□□□ 1.38
KNOP1-203ENST00000565844 CDC42BPAQ5VT25 1732 aa23.62■■□□□ 1.37
KNOP1-203ENST00000565844 RICTORQ6R327 1708 aa23.62■■□□□ 1.37
KNOP1-203ENST00000565844 ITSN2Q9NZM3 1697 aa23.62■■□□□ 1.37
KNOP1-203ENST00000565844 FANCAO15360 1455 aa23.62■■□□□ 1.37
KNOP1-203ENST00000565844 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
KNOP1-203ENST00000565844 CFAP74Q9C0B2 1584 aa23.62■■□□□ 1.37
KNOP1-203ENST00000565844 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
KNOP1-203ENST00000565844 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
KNOP1-203ENST00000565844 AKNAQ7Z591 1439 aa23.59■■□□□ 1.37
KNOP1-203ENST00000565844 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
KNOP1-203ENST00000565844 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
KNOP1-203ENST00000565844 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
KNOP1-203ENST00000565844 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
KNOP1-203ENST00000565844 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
KNOP1-203ENST00000565844 ARHGEF40Q8TER5 1519 aa23.51■■□□□ 1.35
KNOP1-203ENST00000565844 PLCH2O75038 1416 aa23.51■■□□□ 1.35
KNOP1-203ENST00000565844 HECW2Q9P2P5 1572 aa23.5■■□□□ 1.35
KNOP1-203ENST00000565844 ADAMTSL3P82987 1691 aa23.5■■□□□ 1.35
KNOP1-203ENST00000565844 BCORL1Q5H9F3 1711 aa23.49■■□□□ 1.35
KNOP1-203ENST00000565844 ARID4BQ4LE39 1312 aaPredicted RBP23.49■■□□□ 1.35
KNOP1-203ENST00000565844 SIGLEC1Q9BZZ2 1709 aa23.48■■□□□ 1.35
KNOP1-203ENST00000565844 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
KNOP1-203ENST00000565844 FGD6Q6ZV73 1430 aa23.46■■□□□ 1.35
KNOP1-203ENST00000565844 CFDP1Q9UEE9 299 aaPredicted RBP23.46■■□□□ 1.35
KNOP1-203ENST00000565844 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
KNOP1-203ENST00000565844 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.34
KNOP1-203ENST00000565844 YEATS2Q9ULM3 1422 aa23.45■■□□□ 1.34
KNOP1-203ENST00000565844 ZMYM4Q5VZL5 1548 aa23.44■■□□□ 1.34
KNOP1-203ENST00000565844 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
KNOP1-203ENST00000565844 ZFYVE16Q7Z3T8 1539 aa23.44■■□□□ 1.34
KNOP1-203ENST00000565844 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
KNOP1-203ENST00000565844 RIMS1Q86UR5 1692 aaKnown RBP23.42■■□□□ 1.34
KNOP1-203ENST00000565844 POGZQ7Z3K3 1410 aa23.41■■□□□ 1.34
KNOP1-203ENST00000565844 CAMSAP2Q08AD1 1489 aa23.41■■□□□ 1.34
KNOP1-203ENST00000565844 ZNF777Q9ULD5 760 aaPredicted RBP23.4■■□□□ 1.34
KNOP1-203ENST00000565844 EFCAB2Q5VUJ9 269 aa23.4■■□□□ 1.34
KNOP1-203ENST00000565844 PTPRMP28827 1452 aa23.39■■□□□ 1.33
KNOP1-203ENST00000565844 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
KNOP1-203ENST00000565844 ABCC1P33527 1531 aa23.37■■□□□ 1.33
KNOP1-203ENST00000565844 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
KNOP1-203ENST00000565844 ZNF644Q9H582 1327 aaPredicted RBP23.35■■□□□ 1.33
KNOP1-203ENST00000565844 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
KNOP1-203ENST00000565844 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
KNOP1-203ENST00000565844 PLEKHH2Q8IVE3 1493 aa23.34■■□□□ 1.33
KNOP1-203ENST00000565844 MLECQ14165 292 aa23.34■■□□□ 1.33
KNOP1-203ENST00000565844 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
KNOP1-203ENST00000565844 FER1L4A9Z1Z3 1794 aa23.31■■□□□ 1.32
KNOP1-203ENST00000565844 MAGI2Q86UL8 1455 aa23.31■■□□□ 1.32
KNOP1-203ENST00000565844 AFAP1Q8N556 730 aa23.29■■□□□ 1.32
KNOP1-203ENST00000565844 MYT1LQ9UL68 1186 aa23.29■■□□□ 1.32
KNOP1-203ENST00000565844 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
KNOP1-203ENST00000565844 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
KNOP1-203ENST00000565844 ZNF518AQ6AHZ1 1483 aa23.28■■□□□ 1.32
KNOP1-203ENST00000565844 DNMT1P26358 1616 aaKnown RBP23.27■■□□□ 1.32
KNOP1-203ENST00000565844 KDM5CP41229 1560 aa23.27■■□□□ 1.32
KNOP1-203ENST00000565844 ARHGEF5Q12774 1597 aa23.27■■□□□ 1.32
KNOP1-203ENST00000565844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.32
KNOP1-203ENST00000565844 CROCC2H7BZ55 1655 aa23.26■■□□□ 1.31
KNOP1-203ENST00000565844 ATP10AO60312 1499 aa23.25■■□□□ 1.31
KNOP1-203ENST00000565844 HNRNPMP52272 730 aaKnown RBP eCLIP23.25■■□□□ 1.31
KNOP1-203ENST00000565844 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
KNOP1-203ENST00000565844 C9orf84Q5VXU9 1444 aa23.24■■□□□ 1.31
KNOP1-203ENST00000565844 TRAPPC8Q9Y2L5 1435 aa23.24■■□□□ 1.31
KNOP1-203ENST00000565844 ABCA6Q8N139 1617 aa23.24■■□□□ 1.31
KNOP1-203ENST00000565844 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
KNOP1-203ENST00000565844 CCDC141Q6ZP82 1450 aa23.23■■□□□ 1.31
KNOP1-203ENST00000565844 DAPK1P53355 1430 aa23.21■■□□□ 1.31
KNOP1-203ENST00000565844 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
KNOP1-203ENST00000565844 ABCC5O15440 1437 aa23.18■■□□□ 1.3
KNOP1-203ENST00000565844 ITGAEP38570 1179 aa23.17■■□□□ 1.3
KNOP1-203ENST00000565844 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
KNOP1-203ENST00000565844 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
KNOP1-203ENST00000565844 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
KNOP1-203ENST00000565844 RSPH4AQ5TD94 716 aa23.15■■□□□ 1.3
KNOP1-203ENST00000565844 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
KNOP1-203ENST00000565844 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.3
KNOP1-203ENST00000565844 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
KNOP1-203ENST00000565844 MLH3Q9UHC1 1453 aa23.13■■□□□ 1.29
KNOP1-203ENST00000565844 ATP7AQ04656 1500 aa23.11■■□□□ 1.29
KNOP1-203ENST00000565844 TSPY4P0CV99 314 aa23.11■■□□□ 1.29
KNOP1-203ENST00000565844 TSPY10P0CW01 314 aa23.11■■□□□ 1.29
KNOP1-203ENST00000565844 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
KNOP1-203ENST00000565844 HSPA2P54652 639 aa23.1■■□□□ 1.29
KNOP1-203ENST00000565844 SPAG9O60271 1321 aaKnown RBP23.09■■□□□ 1.29
KNOP1-203ENST00000565844 REREQ9P2R6 1566 aa23.09■■□□□ 1.29
KNOP1-203ENST00000565844 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
KNOP1-203ENST00000565844 ILDR1Q86SU0 546 aaPredicted RBP23.08■■□□□ 1.29
KNOP1-203ENST00000565844 CHIC2Q9UKJ5 165 aa23.07■■□□□ 1.28
KNOP1-203ENST00000565844 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
KNOP1-203ENST00000565844 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
KNOP1-203ENST00000565844 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
KNOP1-203ENST00000565844 C3P01024 1663 aa23.04■■□□□ 1.28
KNOP1-203ENST00000565844 PREX1Q8TCU6 1659 aa23.03■■□□□ 1.28
KNOP1-203ENST00000565844 ANKRD30AQ9BXX3 1397 aa23.02■■□□□ 1.28
KNOP1-203ENST00000565844 AGLP35573 1532 aa23.01■■□□□ 1.27
KNOP1-203ENST00000565844 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
KNOP1-203ENST00000565844 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
KNOP1-203ENST00000565844 NCOA1Q15788 1441 aa23■■□□□ 1.27
KNOP1-203ENST00000565844 KIF15Q9NS87 1388 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms