RNA–Protein interactions for RNA: ENST00000565413.1

E4F1-207, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-207ENST00000565413 SCAPERQ9BY12 1400 aa32.35■■■□□ 2.77
E4F1-207ENST00000565413 EFCAB2Q5VUJ9 269 aa32.35■■■□□ 2.77
E4F1-207ENST00000565413 ILDR1Q86SU0 546 aaPredicted RBP32.33■■■□□ 2.77
E4F1-207ENST00000565413 TROQ12816 1431 aaPredicted RBP32.31■■■□□ 2.76
E4F1-207ENST00000565413 RIMS1Q86UR5 1692 aaKnown RBP32.27■■■□□ 2.76
E4F1-207ENST00000565413 YEATS2Q9ULM3 1422 aa32.27■■■□□ 2.76
E4F1-207ENST00000565413 ARHGAP5Q13017 1502 aa32.26■■■□□ 2.75
E4F1-207ENST00000565413 CCDC18Q5T9S5 1454 aa32.23■■■□□ 2.75
E4F1-207ENST00000565413 LRRIQ1Q96JM4 1722 aa32.2■■■□□ 2.75
E4F1-207ENST00000565413 CASKIN1Q8WXD9 1431 aa32.2■■■□□ 2.75
E4F1-207ENST00000565413 PCF11O94913 1555 aaKnown RBP32.19■■■□□ 2.74
E4F1-207ENST00000565413 ZNF518AQ6AHZ1 1483 aa32.19■■■□□ 2.74
E4F1-207ENST00000565413 MLECQ14165 292 aa32.18■■■□□ 2.74
E4F1-207ENST00000565413 MYT1LQ9UL68 1186 aa32.17■■■□□ 2.74
E4F1-207ENST00000565413 ATP10AO60312 1499 aa32.16■■■□□ 2.74
E4F1-207ENST00000565413 PLPPR3Q6T4P5 718 aa32.16■■■□□ 2.74
E4F1-207ENST00000565413 C9orf84Q5VXU9 1444 aa32.15■■■□□ 2.74
E4F1-207ENST00000565413 SIGLEC1Q9BZZ2 1709 aa32.14■■■□□ 2.74
E4F1-207ENST00000565413 FER1L4A9Z1Z3 1794 aa32.12■■■□□ 2.73
E4F1-207ENST00000565413 LMTK3Q96Q04 1460 aa32.11■■■□□ 2.73
E4F1-207ENST00000565413 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
E4F1-207ENST00000565413 CDC42BPBQ9Y5S2 1711 aa32.08■■■□□ 2.73
E4F1-207ENST00000565413 AFAP1Q8N556 730 aa32.07■■■□□ 2.72
E4F1-207ENST00000565413 PREX2Q70Z35 1606 aa32.07■■■□□ 2.72
E4F1-207ENST00000565413 KDM5CP41229 1560 aa32.07■■■□□ 2.72
E4F1-207ENST00000565413 ARHGEF12Q9NZN5 1544 aa32.01■■■□□ 2.72
E4F1-207ENST00000565413 ABCC1P33527 1531 aa31.98■■■□□ 2.71
E4F1-207ENST00000565413 MLH3Q9UHC1 1453 aa31.97■■■□□ 2.71
E4F1-207ENST00000565413 DIP2CQ9Y2E4 1556 aa31.95■■■□□ 2.71
E4F1-207ENST00000565413 HSPA2P54652 639 aa31.95■■■□□ 2.71
E4F1-207ENST00000565413 ITSN2Q9NZM3 1697 aa31.95■■■□□ 2.7
E4F1-207ENST00000565413 CDC42BPAQ5VT25 1732 aa31.95■■■□□ 2.7
E4F1-207ENST00000565413 REREQ9P2R6 1566 aa31.92■■■□□ 2.7
E4F1-207ENST00000565413 TRAPPC8Q9Y2L5 1435 aa31.92■■■□□ 2.7
E4F1-207ENST00000565413 FBXO41Q8TF61 875 aa31.91■■■□□ 2.7
E4F1-207ENST00000565413 ESF1Q9H501 851 aaKnown RBP31.91■■■□□ 2.7
E4F1-207ENST00000565413 ZNF777Q9ULD5 760 aaPredicted RBP31.91■■■□□ 2.7
E4F1-207ENST00000565413 ABCA6Q8N139 1617 aa31.9■■■□□ 2.7
E4F1-207ENST00000565413 PREX1Q8TCU6 1659 aa31.86■■■□□ 2.69
E4F1-207ENST00000565413 CEBPAP49715 358 aaPredicted RBP31.84■■■□□ 2.69
E4F1-207ENST00000565413 MTUS2Q5JR59 1369 aa31.83■■■□□ 2.69
E4F1-207ENST00000565413 AGLP35573 1532 aa31.82■■■□□ 2.68
E4F1-207ENST00000565413 CCNB3Q8WWL7 1395 aa31.81■■■□□ 2.68
E4F1-207ENST00000565413 GPATCH8Q9UKJ3 1502 aaKnown RBP31.81■■■□□ 2.68
E4F1-207ENST00000565413 SETD1BQ9UPS6 1966 aaKnown RBP31.8■■■□□ 2.68
E4F1-207ENST00000565413 CFDP1Q9UEE9 299 aaPredicted RBP31.8■■■□□ 2.68
E4F1-207ENST00000565413 KIDINS220Q9ULH0 1771 aa31.8■■■□□ 2.68
E4F1-207ENST00000565413 SAMD9LQ8IVG5 1584 aa31.79■■■□□ 2.68
E4F1-207ENST00000565413 SYCP2Q9BX26 1530 aa31.79■■■□□ 2.68
E4F1-207ENST00000565413 PLEKHH2Q8IVE3 1493 aa31.78■■■□□ 2.68
E4F1-207ENST00000565413 SPAG9O60271 1321 aaKnown RBP31.77■■■□□ 2.68
E4F1-207ENST00000565413 UHRF1BP1Q6BDS2 1440 aa31.77■■■□□ 2.68
E4F1-207ENST00000565413 HNRNPMP52272 730 aaKnown RBP eCLIP31.74■■■□□ 2.671e-6■■■□□ 16.8
E4F1-207ENST00000565413 KIAA1107Q9UPP5 1409 aa31.73■■■□□ 2.67
E4F1-207ENST00000565413 CNTLNQ9NXG0 1405 aa31.72■■■□□ 2.67
E4F1-207ENST00000565413 C3P01024 1663 aa31.7■■■□□ 2.67
E4F1-207ENST00000565413 CEP162Q5TB80 1403 aa31.69■■■□□ 2.66
E4F1-207ENST00000565413 DMRT2Q9Y5R5 561 aa31.69■■■□□ 2.66
E4F1-207ENST00000565413 EHBP1L1Q8N3D4 1523 aa31.68■■■□□ 2.66
E4F1-207ENST00000565413 ATP7AQ04656 1500 aa31.67■■■□□ 2.66
E4F1-207ENST00000565413 SUPT6HQ7KZ85 1726 aaKnown RBP31.63■■■□□ 2.65
E4F1-207ENST00000565413 INO80Q9ULG1 1556 aaPredicted RBP31.61■■■□□ 2.65
E4F1-207ENST00000565413 CERKQ8TCT0 537 aa31.6■■■□□ 2.65
E4F1-207ENST00000565413 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
E4F1-207ENST00000565413 A2MP01023 1474 aa31.58■■■□□ 2.65
E4F1-207ENST00000565413 MROH2AA6NES4 1674 aa31.57■■■□□ 2.65
E4F1-207ENST00000565413 STRCQ7RTU9 1775 aa31.55■■■□□ 2.64
E4F1-207ENST00000565413 PLXNC1O60486 1568 aa31.53■■■□□ 2.64
E4F1-207ENST00000565413 ADGBQ8N7X0 1667 aa31.53■■■□□ 2.64
E4F1-207ENST00000565413 NPATQ14207 1427 aa31.52■■■□□ 2.64
E4F1-207ENST00000565413 ZNF644Q9H582 1327 aaPredicted RBP31.51■■■□□ 2.64
E4F1-207ENST00000565413 ZMYM3Q14202 1370 aa31.51■■■□□ 2.63
E4F1-207ENST00000565413 GGT6Q6P531 493 aa31.5■■■□□ 2.63
E4F1-207ENST00000565413 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
E4F1-207ENST00000565413 PPP6R1Q9UPN7 881 aa31.46■■■□□ 2.63
E4F1-207ENST00000565413 MBD5Q9P267 1494 aa31.46■■■□□ 2.63
E4F1-207ENST00000565413 RTEL1-TNFRSF6BF6WH68 1400 aa31.45■■■□□ 2.63
E4F1-207ENST00000565413 PTPRTO14522 1441 aa31.45■■■□□ 2.63
E4F1-207ENST00000565413 NCOA2Q15596 1464 aa31.45■■■□□ 2.62
E4F1-207ENST00000565413 RSPH4AQ5TD94 716 aa31.42■■■□□ 2.62
E4F1-207ENST00000565413 CCDC141Q6ZP82 1450 aa31.41■■■□□ 2.62
E4F1-207ENST00000565413 NCOA1Q15788 1441 aa31.4■■■□□ 2.62
E4F1-207ENST00000565413 CAMSAP2Q08AD1 1489 aa31.39■■■□□ 2.62
E4F1-207ENST00000565413 DHX29Q7Z478 1369 aaKnown RBP31.37■■■□□ 2.61
E4F1-207ENST00000565413 VPS8Q8N3P4 1428 aa31.37■■■□□ 2.61
E4F1-207ENST00000565413 CAMSAP1Q5T5Y3 1602 aa31.36■■■□□ 2.61
E4F1-207ENST00000565413 MYO3AQ8NEV4 1616 aa31.33■■■□□ 2.61
E4F1-207ENST00000565413 PTPRKQ15262 1439 aa31.32■■■□□ 2.61
E4F1-207ENST00000565413 TSPY4P0CV99 314 aa31.32■■■□□ 2.6
E4F1-207ENST00000565413 TSPY10P0CW01 314 aa31.32■■■□□ 2.6
E4F1-207ENST00000565413 LOC105371045A0A1W2PR82 267 aa31.31■■■□□ 2.6
E4F1-207ENST00000565413 ZNF142P52746 1687 aaPredicted RBP31.31■■■□□ 2.6
E4F1-207ENST00000565413 KIF3BO15066 747 aa31.3■■■□□ 2.6
E4F1-207ENST00000565413 LRRC9Q6ZRR7 1453 aa31.29■■■□□ 2.6
E4F1-207ENST00000565413 CEP170BQ9Y4F5 1589 aaPredicted RBP31.29■■■□□ 2.6
E4F1-207ENST00000565413 ARHGEF5Q12774 1597 aa31.27■■■□□ 2.6
E4F1-207ENST00000565413 PKD2Q13563 968 aa31.25■■■□□ 2.59
E4F1-207ENST00000565413 FAM135AQ9P2D6 1515 aa31.24■■■□□ 2.59
E4F1-207ENST00000565413 PLA2R1Q13018 1463 aa31.24■■■□□ 2.59
E4F1-207ENST00000565413 KDM5DQ9BY66 1539 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms