RNA–Protein interactions for RNA: ENST00000565413.1

E4F1-207, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-207ENST00000565413 NISCHQ9Y2I1 1504 aa49.26■■■■■ 5.48
E4F1-207ENST00000565413 CCDC180Q9P1Z9 1646 aa44.24■■■■■ 4.67
E4F1-207ENST00000565413 ABCC9O60706 1549 aa44.16■■■■■ 4.66
E4F1-207ENST00000565413 RB1CC1Q8TDY2 1594 aa42.12■■■■■ 4.33
E4F1-207ENST00000565413 NACADO15069 1562 aa41.82■■■■■ 4.29
E4F1-207ENST00000565413 DCAF8L2P0C7V8 631 aa41.68■■■■■ 4.26
E4F1-207ENST00000565413 DNAJC5BQ9UF47 199 aa41.24■■■■■ 4.19
E4F1-207ENST00000565413 MYO15BQ96JP2 1530 aa41.23■■■■■ 4.19
E4F1-207ENST00000565413 PABPN1Q86U42 306 aaKnown RBP eCLIP41.11■■■■■ 4.17
E4F1-207ENST00000565413 UNC13AQ9UPW8 1703 aa41.07■■■■■ 4.16
E4F1-207ENST00000565413 ZCCHC6Q5VYS8 1495 aaKnown RBP40.83■■■■■ 4.13
E4F1-207ENST00000565413 BICRAQ9NZM4 1560 aa40.74■■■■■ 4.11
E4F1-207ENST00000565413 DCAF1Q9Y4B6 1507 aa40.72■■■■■ 4.11
E4F1-207ENST00000565413 SHROOM4Q9ULL8 1493 aa40.36■■■■■ 4.05
E4F1-207ENST00000565413 SCRIBQ14160 1630 aa40.3■■■■■ 4.04
E4F1-207ENST00000565413 CC2D2AQ9P2K1 1620 aa39.89■■■■□ 3.98
E4F1-207ENST00000565413 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.97
E4F1-207ENST00000565413 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
E4F1-207ENST00000565413 NCAPD3P42695 1498 aa38.56■■■■□ 3.76
E4F1-207ENST00000565413 ATAD2BQ9ULI0 1458 aa38.44■■■■□ 3.74
E4F1-207ENST00000565413 SMARCA4P51532 1647 aa38.44■■■■□ 3.74
E4F1-207ENST00000565413 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
E4F1-207ENST00000565413 HMGXB3Q12766 1538 aa38.32■■■■□ 3.72
E4F1-207ENST00000565413 BAZ1AQ9NRL2 1556 aaPredicted RBP38.3■■■■□ 3.72
E4F1-207ENST00000565413 ERCC6Q03468 1493 aa38.23■■■■□ 3.71
E4F1-207ENST00000565413 BAZ1BQ9UIG0 1483 aaKnown RBP38.15■■■■□ 3.7
E4F1-207ENST00000565413 CUX2O14529 1486 aa38.09■■■■□ 3.69
E4F1-207ENST00000565413 PEG3Q9GZU2 1588 aa38.05■■■■□ 3.68
E4F1-207ENST00000565413 DNAJC5Q9H3Z4 198 aa37.96■■■■□ 3.67
E4F1-207ENST00000565413 MROH2BQ7Z745 1585 aa37.92■■■■□ 3.66
E4F1-207ENST00000565413 NESP48681 1621 aa37.9■■■■□ 3.66
E4F1-207ENST00000565413 LAMC3Q9Y6N6 1575 aa37.74■■■■□ 3.63
E4F1-207ENST00000565413 PDS5BQ9NTI5 1447 aa37.56■■■■□ 3.6
E4F1-207ENST00000565413 THOC2Q8NI27 1593 aaKnown RBP37.53■■■■□ 3.6
E4F1-207ENST00000565413 WIZO95785 1651 aa37.49■■■■□ 3.59
E4F1-207ENST00000565413 KIF21AQ7Z4S6 1674 aa37.46■■■■□ 3.59
E4F1-207ENST00000565413 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
E4F1-207ENST00000565413 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
E4F1-207ENST00000565413 RSF1Q96T23 1441 aaPredicted RBP37.17■■■■□ 3.54
E4F1-207ENST00000565413 CEP164Q9UPV0 1460 aa37.07■■■■□ 3.53
E4F1-207ENST00000565413 WDR62O43379 1518 aa37.06■■■■□ 3.52
E4F1-207ENST00000565413 TOP2AP11388 1531 aaKnown RBP37.06■■■■□ 3.52
E4F1-207ENST00000565413 FANCD2Q9BXW9 1451 aa37.01■■■■□ 3.51
E4F1-207ENST00000565413 CFTRP13569 1480 aa36.98■■■■□ 3.51
E4F1-207ENST00000565413 PRDM2Q13029 1718 aa36.68■■■■□ 3.46
E4F1-207ENST00000565413 URB2Q14146 1524 aaKnown RBP36.64■■■■□ 3.46
E4F1-207ENST00000565413 CCDC88BA6NC98 1476 aa36.61■■■■□ 3.45
E4F1-207ENST00000565413 TRIM41Q8WV44 630 aa36.39■■■■□ 3.42
E4F1-207ENST00000565413 OSCARQ8IYS5 282 aa36.38■■■■□ 3.41
E4F1-207ENST00000565413 IFT140Q96RY7 1462 aa36.32■■■■□ 3.41
E4F1-207ENST00000565413 ABCC8Q09428 1581 aa36.31■■■■□ 3.4
E4F1-207ENST00000565413 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
E4F1-207ENST00000565413 DNMBPQ6XZF7 1577 aa36.19■■■■□ 3.38
E4F1-207ENST00000565413 ZNF608Q9ULD9 1512 aaPredicted RBP36.17■■■■□ 3.38
E4F1-207ENST00000565413 EIF4G3O43432 1585 aaKnown RBP36.03■■■■□ 3.36
E4F1-207ENST00000565413 TARBP1Q13395 1621 aaKnown RBP35.93■■■■□ 3.34
E4F1-207ENST00000565413 POLA1P09884 1462 aaPredicted RBP35.91■■■■□ 3.34
E4F1-207ENST00000565413 AQRO60306 1485 aaKnown RBP eCLIP35.88■■■■□ 3.332e-6■■■□□ 16.7
E4F1-207ENST00000565413 RIMBP3CA6NJZ7 1639 aa35.83■■■■□ 3.33
E4F1-207ENST00000565413 RIMBP3BA6NNM3 1639 aa35.83■■■■□ 3.33
E4F1-207ENST00000565413 RIMBP3Q9UFD9 1639 aa35.83■■■■□ 3.33
E4F1-207ENST00000565413 SOGA1O94964 1423 aa35.79■■■■□ 3.32
E4F1-207ENST00000565413 RAD54L2Q9Y4B4 1467 aa35.75■■■■□ 3.31
E4F1-207ENST00000565413 CHD1O14646 1710 aa35.75■■■■□ 3.31
E4F1-207ENST00000565413 FBLN2P98095 1184 aa35.75■■■■□ 3.31
E4F1-207ENST00000565413 ARHGEF11O15085 1522 aa35.74■■■■□ 3.31
E4F1-207ENST00000565413 FGD5Q6ZNL6 1462 aa35.71■■■■□ 3.31
E4F1-207ENST00000565413 TDRD9Q8NDG6 1382 aaKnown RBP35.68■■■■□ 3.3
E4F1-207ENST00000565413 WDR97A6NE52 1622 aa35.67■■■■□ 3.3
E4F1-207ENST00000565413 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
E4F1-207ENST00000565413 CUX1P39880 1505 aa35.64■■■■□ 3.3
E4F1-207ENST00000565413 SNAPC4Q5SXM2 1469 aa35.54■■■■□ 3.28
E4F1-207ENST00000565413 CYB5RLQ6IPT4 315 aa35.51■■■■□ 3.28
E4F1-207ENST00000565413 MAGI1Q96QZ7 1491 aaPredicted RBP35.49■■■■□ 3.27
E4F1-207ENST00000565413 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
E4F1-207ENST00000565413 GRIN2BQ13224 1484 aa35.48■■■■□ 3.27
E4F1-207ENST00000565413 SYNJ1O43426 1573 aa35.39■■■■□ 3.26
E4F1-207ENST00000565413 SYNJ2O15056 1496 aa35.36■■■■□ 3.25
E4F1-207ENST00000565413 GAPVD1Q14C86 1478 aa35.36■■■■□ 3.25
E4F1-207ENST00000565413 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
E4F1-207ENST00000565413 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
E4F1-207ENST00000565413 CLASP1Q7Z460 1538 aa35.31■■■■□ 3.24
E4F1-207ENST00000565413 ABCA10Q8WWZ4 1543 aa35.31■■■■□ 3.24
E4F1-207ENST00000565413 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
E4F1-207ENST00000565413 ABCA5Q8WWZ7 1642 aa35.23■■■■□ 3.23
E4F1-207ENST00000565413 TRHP20396 242 aaPredicted RBP35.18■■■■□ 3.22
E4F1-207ENST00000565413 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
E4F1-207ENST00000565413 BIVM-ERCC5R4GMW8 1640 aa35.13■■■■□ 3.21
E4F1-207ENST00000565413 GRIN2AQ12879 1464 aa35.01■■■■□ 3.19
E4F1-207ENST00000565413 ADAMTS12P58397 1594 aa34.98■■■■□ 3.19
E4F1-207ENST00000565413 FHAD1B1AJZ9 1412 aa34.92■■■■□ 3.18
E4F1-207ENST00000565413 ERICH3Q5RHP9 1530 aa34.9■■■■□ 3.18
E4F1-207ENST00000565413 NUP160Q12769 1436 aa34.85■■■■□ 3.17
E4F1-207ENST00000565413 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
E4F1-207ENST00000565413 ERCC6L2Q5T890 1561 aa34.7■■■■□ 3.15
E4F1-207ENST00000565413 SHROOM2Q13796 1616 aa34.69■■■■□ 3.14
E4F1-207ENST00000565413 PRG4Q92954 1404 aaPredicted RBP34.56■■■■□ 3.12
E4F1-207ENST00000565413 JPH4Q96JJ6 628 aa34.54■■■■□ 3.12
E4F1-207ENST00000565413 KIF27Q86VH2 1401 aa34.51■■■■□ 3.12
E4F1-207ENST00000565413 RUSC2Q8N2Y8 1516 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms