RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 HECW2Q9P2P5 1572 aa19.74■□□□□ 0.75
GTF3C1-204ENST00000564664 BCORL1Q5H9F3 1711 aa19.73■□□□□ 0.75
GTF3C1-204ENST00000564664 MYO5CQ9NQX4 1742 aa19.73■□□□□ 0.75
GTF3C1-204ENST00000564664 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
GTF3C1-204ENST00000564664 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
GTF3C1-204ENST00000564664 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
GTF3C1-204ENST00000564664 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
GTF3C1-204ENST00000564664 LRRIQ1Q96JM4 1722 aa19.68■□□□□ 0.74
GTF3C1-204ENST00000564664 ATP10AO60312 1499 aa19.67■□□□□ 0.74
GTF3C1-204ENST00000564664 ZNF518AQ6AHZ1 1483 aa19.67■□□□□ 0.74
GTF3C1-204ENST00000564664 PCF11O94913 1555 aaKnown RBP19.66■□□□□ 0.74
GTF3C1-204ENST00000564664 AFAP1Q8N556 730 aa19.65■□□□□ 0.74
GTF3C1-204ENST00000564664 MADDQ8WXG6 1647 aa19.64■□□□□ 0.73
GTF3C1-204ENST00000564664 C9orf84Q5VXU9 1444 aa19.63■□□□□ 0.73
GTF3C1-204ENST00000564664 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
GTF3C1-204ENST00000564664 KDM5CP41229 1560 aa19.6■□□□□ 0.73
GTF3C1-204ENST00000564664 CDC42BPBQ9Y5S2 1711 aa19.59■□□□□ 0.73
GTF3C1-204ENST00000564664 MLECQ14165 292 aa19.59■□□□□ 0.73
GTF3C1-204ENST00000564664 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
GTF3C1-204ENST00000564664 PREX2Q70Z35 1606 aa19.58■□□□□ 0.72
GTF3C1-204ENST00000564664 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
GTF3C1-204ENST00000564664 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
GTF3C1-204ENST00000564664 ARHGEF12Q9NZN5 1544 aa19.54■□□□□ 0.72
GTF3C1-204ENST00000564664 SIGLEC1Q9BZZ2 1709 aa19.54■□□□□ 0.72
GTF3C1-204ENST00000564664 TRAPPC8Q9Y2L5 1435 aa19.53■□□□□ 0.72
GTF3C1-204ENST00000564664 ABCC1P33527 1531 aa19.53■□□□□ 0.72
GTF3C1-204ENST00000564664 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
GTF3C1-204ENST00000564664 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
GTF3C1-204ENST00000564664 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
GTF3C1-204ENST00000564664 ZNF777Q9ULD5 760 aaPredicted RBP19.52■□□□□ 0.72
GTF3C1-204ENST00000564664 MTUS2Q5JR59 1369 aa19.52■□□□□ 0.72
GTF3C1-204ENST00000564664 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
GTF3C1-204ENST00000564664 KIAA1107Q9UPP5 1409 aa19.51■□□□□ 0.71
GTF3C1-204ENST00000564664 CDC42BPAQ5VT25 1732 aa19.51■□□□□ 0.71
GTF3C1-204ENST00000564664 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
GTF3C1-204ENST00000564664 PLEKHH2Q8IVE3 1493 aa19.5■□□□□ 0.71
GTF3C1-204ENST00000564664 FER1L4A9Z1Z3 1794 aa19.49■□□□□ 0.71
GTF3C1-204ENST00000564664 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
GTF3C1-204ENST00000564664 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
GTF3C1-204ENST00000564664 AGLP35573 1532 aa19.48■□□□□ 0.71
GTF3C1-204ENST00000564664 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
GTF3C1-204ENST00000564664 ITSN2Q9NZM3 1697 aa19.48■□□□□ 0.71
GTF3C1-204ENST00000564664 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
GTF3C1-204ENST00000564664 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
GTF3C1-204ENST00000564664 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
GTF3C1-204ENST00000564664 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
GTF3C1-204ENST00000564664 SAMD9LQ8IVG5 1584 aa19.43■□□□□ 0.7
GTF3C1-204ENST00000564664 ABCA6Q8N139 1617 aa19.43■□□□□ 0.7
GTF3C1-204ENST00000564664 KIDINS220Q9ULH0 1771 aa19.42■□□□□ 0.7
GTF3C1-204ENST00000564664 CEBPAP49715 358 aaPredicted RBP19.42■□□□□ 0.7
GTF3C1-204ENST00000564664 HSPA2P54652 639 aa19.41■□□□□ 0.7
GTF3C1-204ENST00000564664 EHBP1L1Q8N3D4 1523 aa19.41■□□□□ 0.7
GTF3C1-204ENST00000564664 CNTLNQ9NXG0 1405 aa19.4■□□□□ 0.7
GTF3C1-204ENST00000564664 SYCP2Q9BX26 1530 aa19.4■□□□□ 0.7
GTF3C1-204ENST00000564664 RSPH4AQ5TD94 716 aa19.39■□□□□ 0.69
GTF3C1-204ENST00000564664 FBXO41Q8TF61 875 aa19.38■□□□□ 0.69
GTF3C1-204ENST00000564664 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
GTF3C1-204ENST00000564664 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
GTF3C1-204ENST00000564664 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
GTF3C1-204ENST00000564664 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
GTF3C1-204ENST00000564664 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
GTF3C1-204ENST00000564664 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
GTF3C1-204ENST00000564664 ATP7AQ04656 1500 aa19.34■□□□□ 0.69
GTF3C1-204ENST00000564664 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
GTF3C1-204ENST00000564664 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.69
GTF3C1-204ENST00000564664 MBD5Q9P267 1494 aa19.33■□□□□ 0.68
GTF3C1-204ENST00000564664 A2MP01023 1474 aa19.32■□□□□ 0.68
GTF3C1-204ENST00000564664 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
GTF3C1-204ENST00000564664 NCOA2Q15596 1464 aa19.3■□□□□ 0.68
GTF3C1-204ENST00000564664 INO80Q9ULG1 1556 aaPredicted RBP19.3■□□□□ 0.68
GTF3C1-204ENST00000564664 ZMYM3Q14202 1370 aa19.3■□□□□ 0.68
GTF3C1-204ENST00000564664 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
GTF3C1-204ENST00000564664 C3P01024 1663 aa19.29■□□□□ 0.68
GTF3C1-204ENST00000564664 NPATQ14207 1427 aa19.28■□□□□ 0.68
GTF3C1-204ENST00000564664 GGT6Q6P531 493 aa19.27■□□□□ 0.68
GTF3C1-204ENST00000564664 PLXNC1O60486 1568 aa19.27■□□□□ 0.67
GTF3C1-204ENST00000564664 MAP3K1Q13233 1512 aa19.26■□□□□ 0.67
GTF3C1-204ENST00000564664 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
GTF3C1-204ENST00000564664 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
GTF3C1-204ENST00000564664 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
GTF3C1-204ENST00000564664 MROH2AA6NES4 1674 aa19.25■□□□□ 0.67
GTF3C1-204ENST00000564664 ADGBQ8N7X0 1667 aa19.25■□□□□ 0.67
GTF3C1-204ENST00000564664 LRRC9Q6ZRR7 1453 aa19.24■□□□□ 0.67
GTF3C1-204ENST00000564664 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
GTF3C1-204ENST00000564664 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
GTF3C1-204ENST00000564664 CAMSAP2Q08AD1 1489 aa19.21■□□□□ 0.67
GTF3C1-204ENST00000564664 PTPRTO14522 1441 aa19.2■□□□□ 0.66
GTF3C1-204ENST00000564664 KIF3BO15066 747 aa19.18■□□□□ 0.66
GTF3C1-204ENST00000564664 APLP2Q06481 763 aa19.18■□□□□ 0.66
GTF3C1-204ENST00000564664 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
GTF3C1-204ENST00000564664 STRCQ7RTU9 1775 aa19.18■□□□□ 0.66
GTF3C1-204ENST00000564664 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
GTF3C1-204ENST00000564664 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
GTF3C1-204ENST00000564664 PTPRKQ15262 1439 aa19.17■□□□□ 0.66
GTF3C1-204ENST00000564664 CLTCQ00610 1675 aaKnown RBP19.15■□□□□ 0.66
GTF3C1-204ENST00000564664 NCOA1Q15788 1441 aa19.14■□□□□ 0.65
GTF3C1-204ENST00000564664 FAM135AQ9P2D6 1515 aa19.14■□□□□ 0.65
GTF3C1-204ENST00000564664 PKD2Q13563 968 aa19.13■□□□□ 0.65
GTF3C1-204ENST00000564664 MYOM3Q5VTT5 1437 aa19.12■□□□□ 0.65
GTF3C1-204ENST00000564664 WASHC2CQ9Y4E1 1318 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms