RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
MAP1LC3B-205ENST00000564638 TEX14Q8IWB6 1497 aa11.28□□□□□ -0.6
MAP1LC3B-205ENST00000564638 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
MAP1LC3B-205ENST00000564638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.28□□□□□ -0.62e-6■■■■□ 19.9
MAP1LC3B-205ENST00000564638 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
MAP1LC3B-205ENST00000564638 PTPRMP28827 1452 aa11.27□□□□□ -0.6
MAP1LC3B-205ENST00000564638 TIAM1Q13009 1591 aa11.27□□□□□ -0.61
MAP1LC3B-205ENST00000564638 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.61
MAP1LC3B-205ENST00000564638 MYO5CQ9NQX4 1742 aa11.25□□□□□ -0.61
MAP1LC3B-205ENST00000564638 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
MAP1LC3B-205ENST00000564638 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
MAP1LC3B-205ENST00000564638 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.61
MAP1LC3B-205ENST00000564638 SUPT6HQ7KZ85 1726 aaKnown RBP11.21□□□□□ -0.62
MAP1LC3B-205ENST00000564638 ARHGAP5Q13017 1502 aa11.2□□□□□ -0.62
MAP1LC3B-205ENST00000564638 FANCAO15360 1455 aa11.2□□□□□ -0.62
MAP1LC3B-205ENST00000564638 CDC42BPAQ5VT25 1732 aa11.2□□□□□ -0.62
MAP1LC3B-205ENST00000564638 PREX2Q70Z35 1606 aa11.2□□□□□ -0.62
MAP1LC3B-205ENST00000564638 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
MAP1LC3B-205ENST00000564638 PLCH2O75038 1416 aa11.19□□□□□ -0.62
MAP1LC3B-205ENST00000564638 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
MAP1LC3B-205ENST00000564638 CDC42BPBQ9Y5S2 1711 aa11.19□□□□□ -0.62
MAP1LC3B-205ENST00000564638 HSPA2P54652 639 aa11.19□□□□□ -0.62
MAP1LC3B-205ENST00000564638 NEO1Q92859 1461 aa11.19□□□□□ -0.62
MAP1LC3B-205ENST00000564638 KANK4Q5T7N3 995 aaPredicted RBP11.18□□□□□ -0.62
MAP1LC3B-205ENST00000564638 SPATA31D1Q6ZQQ2 1576 aa11.18□□□□□ -0.62
MAP1LC3B-205ENST00000564638 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
MAP1LC3B-205ENST00000564638 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
MAP1LC3B-205ENST00000564638 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
MAP1LC3B-205ENST00000564638 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
MAP1LC3B-205ENST00000564638 ZNF777Q9ULD5 760 aaPredicted RBP11.17□□□□□ -0.62
MAP1LC3B-205ENST00000564638 NCOA2Q15596 1464 aa11.17□□□□□ -0.62
MAP1LC3B-205ENST00000564638 ARAP3Q8WWN8 1544 aa11.16□□□□□ -0.62
MAP1LC3B-205ENST00000564638 ITSN2Q9NZM3 1697 aa11.16□□□□□ -0.62
MAP1LC3B-205ENST00000564638 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
MAP1LC3B-205ENST00000564638 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
MAP1LC3B-205ENST00000564638 DENND4BO75064 1496 aaPredicted RBP11.14□□□□□ -0.63
MAP1LC3B-205ENST00000564638 MADDQ8WXG6 1647 aa11.14□□□□□ -0.63
MAP1LC3B-205ENST00000564638 RAPGEF3O95398 923 aa11.14□□□□□ -0.63
MAP1LC3B-205ENST00000564638 CFDP1Q9UEE9 299 aaPredicted RBP11.14□□□□□ -0.63
MAP1LC3B-205ENST00000564638 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
MAP1LC3B-205ENST00000564638 BCORL1Q5H9F3 1711 aa11.12□□□□□ -0.63
MAP1LC3B-205ENST00000564638 RICTORQ6R327 1708 aa11.12□□□□□ -0.63
MAP1LC3B-205ENST00000564638 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
MAP1LC3B-205ENST00000564638 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
MAP1LC3B-205ENST00000564638 ABCC1P33527 1531 aa11.11□□□□□ -0.63
MAP1LC3B-205ENST00000564638 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
MAP1LC3B-205ENST00000564638 POGZQ7Z3K3 1410 aa11.09□□□□□ -0.63
MAP1LC3B-205ENST00000564638 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
MAP1LC3B-205ENST00000564638 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
MAP1LC3B-205ENST00000564638 HNRNPMP52272 730 aaKnown RBP eCLIP11.08□□□□□ -0.64
MAP1LC3B-205ENST00000564638 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
MAP1LC3B-205ENST00000564638 MYOM3Q5VTT5 1437 aa11.08□□□□□ -0.64
MAP1LC3B-205ENST00000564638 CAMSAP2Q08AD1 1489 aa11.07□□□□□ -0.64
MAP1LC3B-205ENST00000564638 ZNF518AQ6AHZ1 1483 aa11.07□□□□□ -0.64
MAP1LC3B-205ENST00000564638 PLEKHH2Q8IVE3 1493 aa11.07□□□□□ -0.64
MAP1LC3B-205ENST00000564638 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
MAP1LC3B-205ENST00000564638 PPP6R1Q9UPN7 881 aa11.07□□□□□ -0.64
MAP1LC3B-205ENST00000564638 TRAPPC8Q9Y2L5 1435 aa11.07□□□□□ -0.64
MAP1LC3B-205ENST00000564638 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
MAP1LC3B-205ENST00000564638 ZFYVE16Q7Z3T8 1539 aa11.05□□□□□ -0.64
MAP1LC3B-205ENST00000564638 ARHGEF40Q8TER5 1519 aa11.05□□□□□ -0.64
MAP1LC3B-205ENST00000564638 RIMS1Q86UR5 1692 aaKnown RBP11.04□□□□□ -0.64
MAP1LC3B-205ENST00000564638 SIGLEC1Q9BZZ2 1709 aa11.04□□□□□ -0.64
MAP1LC3B-205ENST00000564638 KDM5CP41229 1560 aa11.04□□□□□ -0.64
MAP1LC3B-205ENST00000564638 YEATS2Q9ULM3 1422 aa11.04□□□□□ -0.64
MAP1LC3B-205ENST00000564638 ADRA2BP18089 450 aa11.04□□□□□ -0.64
MAP1LC3B-205ENST00000564638 PTPN23Q9H3S7 1636 aa11.04□□□□□ -0.64
MAP1LC3B-205ENST00000564638 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
MAP1LC3B-205ENST00000564638 KIAA1107Q9UPP5 1409 aa11.03□□□□□ -0.64
MAP1LC3B-205ENST00000564638 STRCQ7RTU9 1775 aa11.03□□□□□ -0.64
MAP1LC3B-205ENST00000564638 FGD6Q6ZV73 1430 aa11.02□□□□□ -0.64
MAP1LC3B-205ENST00000564638 MAGI2Q86UL8 1455 aa11.02□□□□□ -0.65
MAP1LC3B-205ENST00000564638 SPAG9O60271 1321 aaKnown RBP11.02□□□□□ -0.65
MAP1LC3B-205ENST00000564638 CCDC141Q6ZP82 1450 aa11.01□□□□□ -0.65
MAP1LC3B-205ENST00000564638 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
MAP1LC3B-205ENST00000564638 ARID4BQ4LE39 1312 aaPredicted RBP11.01□□□□□ -0.65
MAP1LC3B-205ENST00000564638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.01□□□□□ -0.652e-9■■■□□ 16.5
MAP1LC3B-205ENST00000564638 KIDINS220Q9ULH0 1771 aa11□□□□□ -0.65
MAP1LC3B-205ENST00000564638 MBD5Q9P267 1494 aa11□□□□□ -0.65
MAP1LC3B-205ENST00000564638 ABCA6Q8N139 1617 aa11□□□□□ -0.65
MAP1LC3B-205ENST00000564638 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
MAP1LC3B-205ENST00000564638 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
MAP1LC3B-205ENST00000564638 ARHGEF5Q12774 1597 aa10.99□□□□□ -0.65
MAP1LC3B-205ENST00000564638 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
MAP1LC3B-205ENST00000564638 INO80Q9ULG1 1556 aaPredicted RBP10.99□□□□□ -0.65
MAP1LC3B-205ENST00000564638 LTBP4Q8N2S1 1624 aa10.98□□□□□ -0.65
MAP1LC3B-205ENST00000564638 C9orf84Q5VXU9 1444 aa10.98□□□□□ -0.65
MAP1LC3B-205ENST00000564638 ATP10AO60312 1499 aa10.98□□□□□ -0.65
MAP1LC3B-205ENST00000564638 TCOF1Q13428 1488 aaKnown RBP10.98□□□□□ -0.65
MAP1LC3B-205ENST00000564638 TSPY4P0CV99 314 aa10.97□□□□□ -0.65
MAP1LC3B-205ENST00000564638 TSPY10P0CW01 314 aa10.97□□□□□ -0.65
MAP1LC3B-205ENST00000564638 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
MAP1LC3B-205ENST00000564638 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
MAP1LC3B-205ENST00000564638 CROCC2H7BZ55 1655 aa10.96□□□□□ -0.65
MAP1LC3B-205ENST00000564638 DHX57Q6P158 1386 aaKnown RBP10.96□□□□□ -0.65
MAP1LC3B-205ENST00000564638 MLECQ14165 292 aa10.96□□□□□ -0.65
MAP1LC3B-205ENST00000564638 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
MAP1LC3B-205ENST00000564638 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
MAP1LC3B-205ENST00000564638 DAPK1P53355 1430 aa10.94□□□□□ -0.66
MAP1LC3B-205ENST00000564638 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms