RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
CFDP1-203ENST00000564286 MADDQ8WXG6 1647 aa17.83■□□□□ 0.44
CFDP1-203ENST00000564286 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.44
CFDP1-203ENST00000564286 CFAP74Q9C0B2 1584 aa17.82■□□□□ 0.44
CFDP1-203ENST00000564286 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
CFDP1-203ENST00000564286 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
CFDP1-203ENST00000564286 LMTK3Q96Q04 1460 aa17.8■□□□□ 0.44
CFDP1-203ENST00000564286 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
CFDP1-203ENST00000564286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.79■□□□□ 0.44
CFDP1-203ENST00000564286 MLECQ14165 292 aa17.78■□□□□ 0.44
CFDP1-203ENST00000564286 MAGI2Q86UL8 1455 aa17.77■□□□□ 0.44
CFDP1-203ENST00000564286 HSPA2P54652 639 aa17.76■□□□□ 0.43
CFDP1-203ENST00000564286 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
CFDP1-203ENST00000564286 RIMS1Q86UR5 1692 aaKnown RBP17.76■□□□□ 0.43
CFDP1-203ENST00000564286 ZFYVE16Q7Z3T8 1539 aa17.76■□□□□ 0.43
CFDP1-203ENST00000564286 RICTORQ6R327 1708 aa17.75■□□□□ 0.43
CFDP1-203ENST00000564286 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
CFDP1-203ENST00000564286 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
CFDP1-203ENST00000564286 YEATS2Q9ULM3 1422 aa17.74■□□□□ 0.43
CFDP1-203ENST00000564286 ZMYM4Q5VZL5 1548 aa17.74■□□□□ 0.43
CFDP1-203ENST00000564286 EFCAB2Q5VUJ9 269 aa17.74■□□□□ 0.43
CFDP1-203ENST00000564286 PLCH2O75038 1416 aa17.73■□□□□ 0.43
CFDP1-203ENST00000564286 TTC37Q6PGP7 1564 aa17.73■□□□□ 0.43
CFDP1-203ENST00000564286 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
CFDP1-203ENST00000564286 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
CFDP1-203ENST00000564286 FMN1Q68DA7 1419 aa17.7■□□□□ 0.42
CFDP1-203ENST00000564286 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
CFDP1-203ENST00000564286 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
CFDP1-203ENST00000564286 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
CFDP1-203ENST00000564286 ATP10AO60312 1499 aa17.68■□□□□ 0.42
CFDP1-203ENST00000564286 CERKQ8TCT0 537 aa17.67■□□□□ 0.42
CFDP1-203ENST00000564286 C9orf84Q5VXU9 1444 aa17.65■□□□□ 0.42
CFDP1-203ENST00000564286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.423e-6■■■■□ 19.4
CFDP1-203ENST00000564286 CLIP1P30622 1438 aa17.63■□□□□ 0.41
CFDP1-203ENST00000564286 ZNF518AQ6AHZ1 1483 aa17.62■□□□□ 0.41
CFDP1-203ENST00000564286 CEBPAP49715 358 aaPredicted RBP17.61■□□□□ 0.41
CFDP1-203ENST00000564286 AFAP1Q8N556 730 aa17.61■□□□□ 0.41
CFDP1-203ENST00000564286 FER1L4A9Z1Z3 1794 aa17.61■□□□□ 0.41
CFDP1-203ENST00000564286 ESF1Q9H501 851 aaKnown RBP17.6■□□□□ 0.41
CFDP1-203ENST00000564286 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
CFDP1-203ENST00000564286 ARHGEF12Q9NZN5 1544 aa17.6■□□□□ 0.41
CFDP1-203ENST00000564286 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
CFDP1-203ENST00000564286 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
CFDP1-203ENST00000564286 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
CFDP1-203ENST00000564286 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.41
CFDP1-203ENST00000564286 KIF14Q15058 1648 aa17.58■□□□□ 0.41
CFDP1-203ENST00000564286 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.41
CFDP1-203ENST00000564286 UHRF1BP1Q6BDS2 1440 aa17.55■□□□□ 0.4
CFDP1-203ENST00000564286 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
CFDP1-203ENST00000564286 PREX1Q8TCU6 1659 aa17.52■□□□□ 0.4
CFDP1-203ENST00000564286 KDM5CP41229 1560 aa17.51■□□□□ 0.39
CFDP1-203ENST00000564286 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
CFDP1-203ENST00000564286 DIP2CQ9Y2E4 1556 aa17.47■□□□□ 0.39
CFDP1-203ENST00000564286 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
CFDP1-203ENST00000564286 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
CFDP1-203ENST00000564286 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
CFDP1-203ENST00000564286 CASKIN1Q8WXD9 1431 aa17.45■□□□□ 0.38
CFDP1-203ENST00000564286 TRAPPC8Q9Y2L5 1435 aa17.45■□□□□ 0.38
CFDP1-203ENST00000564286 ZNF777Q9ULD5 760 aaPredicted RBP17.44■□□□□ 0.38
CFDP1-203ENST00000564286 AGLP35573 1532 aa17.43■□□□□ 0.38
CFDP1-203ENST00000564286 PTPRTO14522 1441 aa17.43■□□□□ 0.38
CFDP1-203ENST00000564286 CNTLNQ9NXG0 1405 aa17.43■□□□□ 0.38
CFDP1-203ENST00000564286 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
CFDP1-203ENST00000564286 ABCC1P33527 1531 aa17.42■□□□□ 0.38
CFDP1-203ENST00000564286 ABCA6Q8N139 1617 aa17.41■□□□□ 0.38
CFDP1-203ENST00000564286 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
CFDP1-203ENST00000564286 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
CFDP1-203ENST00000564286 PREX2Q70Z35 1606 aa17.4■□□□□ 0.38
CFDP1-203ENST00000564286 SPAG9O60271 1321 aaKnown RBP17.4■□□□□ 0.38
CFDP1-203ENST00000564286 STRCQ7RTU9 1775 aa17.4■□□□□ 0.38
CFDP1-203ENST00000564286 C3P01024 1663 aa17.37■□□□□ 0.37
CFDP1-203ENST00000564286 LRRIQ1Q96JM4 1722 aa17.37■□□□□ 0.37
CFDP1-203ENST00000564286 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
CFDP1-203ENST00000564286 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
CFDP1-203ENST00000564286 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
CFDP1-203ENST00000564286 ZMYM3Q14202 1370 aa17.35■□□□□ 0.37
CFDP1-203ENST00000564286 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
CFDP1-203ENST00000564286 NPATQ14207 1427 aa17.34■□□□□ 0.37
CFDP1-203ENST00000564286 NCOA1Q15788 1441 aa17.34■□□□□ 0.37
CFDP1-203ENST00000564286 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.36
CFDP1-203ENST00000564286 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
CFDP1-203ENST00000564286 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CFDP1-203ENST00000564286 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
CFDP1-203ENST00000564286 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
CFDP1-203ENST00000564286 SOCS7O14512 581 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 GGT6Q6P531 493 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 ILDR2Q71H61 639 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 SYCP2Q9BX26 1530 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
CFDP1-203ENST00000564286 NCKAP5LQ9HCH0 1330 aa17.29■□□□□ 0.36
CFDP1-203ENST00000564286 PKD2Q13563 968 aa17.28■□□□□ 0.36
CFDP1-203ENST00000564286 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
CFDP1-203ENST00000564286 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
CFDP1-203ENST00000564286 A2MP01023 1474 aa17.27■□□□□ 0.36
CFDP1-203ENST00000564286 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
CFDP1-203ENST00000564286 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
CFDP1-203ENST00000564286 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
CFDP1-203ENST00000564286 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 537 ms