RNA–Protein interactions for RNA: ENST00000564177.1

SCAPER-211, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-211ENST00000564177 ADGRL1O94910 1474 aa28.86■■■□□ 2.21
SCAPER-211ENST00000564177 RAPGEF3O95398 923 aa28.86■■■□□ 2.21
SCAPER-211ENST00000564177 FRMPD1Q5SYB0 1578 aa28.86■■■□□ 2.21
SCAPER-211ENST00000564177 CDC42BPAQ5VT25 1732 aa28.85■■■□□ 2.21
SCAPER-211ENST00000564177 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
SCAPER-211ENST00000564177 LRRC9Q6ZRR7 1453 aa28.84■■■□□ 2.21
SCAPER-211ENST00000564177 SCAPERQ9BY12 1400 aa28.82■■■□□ 2.2
SCAPER-211ENST00000564177 RICTORQ6R327 1708 aa28.81■■■□□ 2.2
SCAPER-211ENST00000564177 CCNB3Q8WWL7 1395 aa28.8■■■□□ 2.2
SCAPER-211ENST00000564177 SUPT6HQ7KZ85 1726 aaKnown RBP28.78■■■□□ 2.2
SCAPER-211ENST00000564177 POGZQ7Z3K3 1410 aa28.77■■■□□ 2.2
SCAPER-211ENST00000564177 NCOA2Q15596 1464 aa28.77■■■□□ 2.2
SCAPER-211ENST00000564177 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
SCAPER-211ENST00000564177 ABCC1P33527 1531 aa28.74■■■□□ 2.19
SCAPER-211ENST00000564177 ZMYM4Q5VZL5 1548 aa28.74■■■□□ 2.19
SCAPER-211ENST00000564177 APLP2Q06481 763 aa28.73■■■□□ 2.19
SCAPER-211ENST00000564177 ITSN2Q9NZM3 1697 aa28.71■■■□□ 2.19
SCAPER-211ENST00000564177 CFDP1Q9UEE9 299 aaPredicted RBP28.71■■■□□ 2.19
SCAPER-211ENST00000564177 ZNF518AQ6AHZ1 1483 aa28.71■■■□□ 2.19
SCAPER-211ENST00000564177 SAMD9LQ8IVG5 1584 aa28.71■■■□□ 2.19
SCAPER-211ENST00000564177 ARHGEF12Q9NZN5 1544 aa28.69■■■□□ 2.18
SCAPER-211ENST00000564177 MAGI2Q86UL8 1455 aa28.67■■■□□ 2.18
SCAPER-211ENST00000564177 ZNF777Q9ULD5 760 aaPredicted RBP28.67■■■□□ 2.18
SCAPER-211ENST00000564177 ARHGEF40Q8TER5 1519 aa28.66■■■□□ 2.18
SCAPER-211ENST00000564177 KDM5CP41229 1560 aa28.66■■■□□ 2.18
SCAPER-211ENST00000564177 PLEKHH2Q8IVE3 1493 aa28.64■■■□□ 2.17
SCAPER-211ENST00000564177 KIAA1107Q9UPP5 1409 aa28.63■■■□□ 2.17
SCAPER-211ENST00000564177 TRAPPC8Q9Y2L5 1435 aa28.63■■■□□ 2.17
SCAPER-211ENST00000564177 AFAP1Q8N556 730 aa28.63■■■□□ 2.17
SCAPER-211ENST00000564177 ZFYVE16Q7Z3T8 1539 aa28.63■■■□□ 2.17
SCAPER-211ENST00000564177 SYCP2Q9BX26 1530 aa28.63■■■□□ 2.17
SCAPER-211ENST00000564177 YEATS2Q9ULM3 1422 aa28.6■■■□□ 2.17
SCAPER-211ENST00000564177 ZNF644Q9H582 1327 aaPredicted RBP28.57■■■□□ 2.16
SCAPER-211ENST00000564177 HECW2Q9P2P5 1572 aa28.56■■■□□ 2.16
SCAPER-211ENST00000564177 MLH3Q9UHC1 1453 aa28.56■■■□□ 2.16
SCAPER-211ENST00000564177 KDM4FA0A1W2PPD8 638 aa28.55■■■□□ 2.16
SCAPER-211ENST00000564177 HNRNPMP52272 730 aaKnown RBP eCLIP28.55■■■□□ 2.16
SCAPER-211ENST00000564177 MYOM3Q5VTT5 1437 aa28.54■■■□□ 2.16
SCAPER-211ENST00000564177 CAMSAP2Q08AD1 1489 aa28.53■■■□□ 2.16
SCAPER-211ENST00000564177 MBD5Q9P267 1494 aa28.53■■■□□ 2.16
SCAPER-211ENST00000564177 MIA2Q96PC5 1412 aa28.51■■■□□ 2.15
SCAPER-211ENST00000564177 ATP10AO60312 1499 aa28.49■■■□□ 2.15
SCAPER-211ENST00000564177 DIP2CQ9Y2E4 1556 aa28.47■■■□□ 2.15
SCAPER-211ENST00000564177 C9orf84Q5VXU9 1444 aa28.46■■■□□ 2.15
SCAPER-211ENST00000564177 ABCA6Q8N139 1617 aa28.46■■■□□ 2.15
SCAPER-211ENST00000564177 KIDINS220Q9ULH0 1771 aa28.45■■■□□ 2.15
SCAPER-211ENST00000564177 MYT1LQ9UL68 1186 aa28.45■■■□□ 2.14
SCAPER-211ENST00000564177 SPAG9O60271 1321 aaKnown RBP28.44■■■□□ 2.14
SCAPER-211ENST00000564177 SIGLEC1Q9BZZ2 1709 aa28.43■■■□□ 2.14
SCAPER-211ENST00000564177 INO80Q9ULG1 1556 aaPredicted RBP28.43■■■□□ 2.14
SCAPER-211ENST00000564177 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
SCAPER-211ENST00000564177 CCDC141Q6ZP82 1450 aa28.42■■■□□ 2.14
SCAPER-211ENST00000564177 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
SCAPER-211ENST00000564177 ATP7AQ04656 1500 aa28.41■■■□□ 2.14
SCAPER-211ENST00000564177 ARHGEF5Q12774 1597 aa28.41■■■□□ 2.14
SCAPER-211ENST00000564177 RSPH4AQ5TD94 716 aa28.4■■■□□ 2.14
SCAPER-211ENST00000564177 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
SCAPER-211ENST00000564177 BCORL1Q5H9F3 1711 aa28.39■■■□□ 2.14
SCAPER-211ENST00000564177 FGD6Q6ZV73 1430 aa28.38■■■□□ 2.13
SCAPER-211ENST00000564177 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
SCAPER-211ENST00000564177 ADAMTSL3P82987 1691 aa28.36■■■□□ 2.13
SCAPER-211ENST00000564177 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
SCAPER-211ENST00000564177 TCOF1Q13428 1488 aaKnown RBP28.34■■■□□ 2.13
SCAPER-211ENST00000564177 AGLP35573 1532 aa28.31■■■□□ 2.12
SCAPER-211ENST00000564177 TSPY4P0CV99 314 aa28.27■■■□□ 2.12
SCAPER-211ENST00000564177 TSPY10P0CW01 314 aa28.27■■■□□ 2.12
SCAPER-211ENST00000564177 MADDQ8WXG6 1647 aa28.27■■■□□ 2.12
SCAPER-211ENST00000564177 PLXNC1O60486 1568 aa28.27■■■□□ 2.12
SCAPER-211ENST00000564177 A2MP01023 1474 aa28.27■■■□□ 2.12
SCAPER-211ENST00000564177 MAST1Q9Y2H9 1570 aa28.26■■■□□ 2.11
SCAPER-211ENST00000564177 ADGBQ8N7X0 1667 aa28.25■■■□□ 2.11
SCAPER-211ENST00000564177 PPARGC1BQ86YN6 1023 aaKnown RBP28.24■■■□□ 2.11
SCAPER-211ENST00000564177 MLECQ14165 292 aa28.23■■■□□ 2.11
SCAPER-211ENST00000564177 ABCC5O15440 1437 aa28.22■■■□□ 2.11
SCAPER-211ENST00000564177 DNMT1P26358 1616 aaKnown RBP28.21■■■□□ 2.11
SCAPER-211ENST00000564177 PTPRMP28827 1452 aa28.21■■■□□ 2.11
SCAPER-211ENST00000564177 SHANK2Q9UPX8 1470 aa28.21■■■□□ 2.11
SCAPER-211ENST00000564177 DAPK1P53355 1430 aa28.19■■■□□ 2.1
SCAPER-211ENST00000564177 CROCC2H7BZ55 1655 aa28.19■■■□□ 2.1
SCAPER-211ENST00000564177 DHX29Q7Z478 1369 aaKnown RBP28.18■■■□□ 2.1
SCAPER-211ENST00000564177 RIMS1Q86UR5 1692 aaKnown RBP28.16■■■□□ 2.1
SCAPER-211ENST00000564177 FER1L4A9Z1Z3 1794 aa28.16■■■□□ 2.1
SCAPER-211ENST00000564177 FAM50AQ14320 339 aaKnown RBP28.14■■■□□ 2.1
SCAPER-211ENST00000564177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.06■■■□□ 2.08
SCAPER-211ENST00000564177 DUOX2Q9NRD8 1548 aa28.05■■■□□ 2.08
SCAPER-211ENST00000564177 KIF15Q9NS87 1388 aa28.04■■■□□ 2.08
SCAPER-211ENST00000564177 CNTLNQ9NXG0 1405 aa28.03■■■□□ 2.08
SCAPER-211ENST00000564177 GGT6Q6P531 493 aa28.03■■■□□ 2.08
SCAPER-211ENST00000564177 ADGRL2O95490 1459 aa28.02■■■□□ 2.08
SCAPER-211ENST00000564177 RRBP1Q9P2E9 1410 aaKnown RBP28.02■■■□□ 2.08
SCAPER-211ENST00000564177 ANKRD30AQ9BXX3 1397 aa28.02■■■□□ 2.08
SCAPER-211ENST00000564177 KIF3BO15066 747 aa28.02■■■□□ 2.08
SCAPER-211ENST00000564177 ESF1Q9H501 851 aaKnown RBP28.01■■■□□ 2.07
SCAPER-211ENST00000564177 CHIC2Q9UKJ5 165 aa28.01■■■□□ 2.07
SCAPER-211ENST00000564177 NCOA1Q15788 1441 aa28.01■■■□□ 2.07
SCAPER-211ENST00000564177 EIF2AK4Q9P2K8 1649 aaKnown RBP28■■■□□ 2.07
SCAPER-211ENST00000564177 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
SCAPER-211ENST00000564177 PPP6R1Q9UPN7 881 aa28■■■□□ 2.07
SCAPER-211ENST00000564177 PTPRKQ15262 1439 aa27.99■■■□□ 2.07
SCAPER-211ENST00000564177 ERBINQ96RT1 1412 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms