RNA–Protein interactions for RNA: ENST00000564170.1

BCAR1-216, Transcript of BCAR1, Cas family scaffold protein, human

TSL 4

Gene BCAR1, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAR1-216	ENST00000564170	NCOA2	Q15596	1464 aa		33.6	■■■□□ 2.97
BCAR1-216	ENST00000564170	PHLDB1	Q86UU1	1377 aa		33.6	■■■□□ 2.97
BCAR1-216	ENST00000564170	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.59	■■■□□ 2.97
BCAR1-216	ENST00000564170	CCNB3	Q8WWL7	1395 aa		33.58	■■■□□ 2.97
BCAR1-216	ENST00000564170	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.58	■■■□□ 2.97
BCAR1-216	ENST00000564170	AKNA	Q7Z591	1439 aa		33.57	■■■□□ 2.96
BCAR1-216	ENST00000564170	ITSN2	Q9NZM3	1697 aa		33.56	■■■□□ 2.96
BCAR1-216	ENST00000564170	EFCAB2	Q5VUJ9	269 aa		33.56	■■■□□ 2.96
BCAR1-216	ENST00000564170	ADGRL1	O94910	1474 aa		33.49	■■■□□ 2.95
BCAR1-216	ENST00000564170	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.45	■■■□□ 2.95
BCAR1-216	ENST00000564170	SAMD9L	Q8IVG5	1584 aa		33.44	■■■□□ 2.94
BCAR1-216	ENST00000564170	RICTOR	Q6R327	1708 aa		33.44	■■■□□ 2.94
BCAR1-216	ENST00000564170	SCAPER	Q9BY12	1400 aa		33.43	■■■□□ 2.94
BCAR1-216	ENST00000564170	DENND4B	O75064	1496 aa	Predicted RBP	33.43	■■■□□ 2.94
BCAR1-216	ENST00000564170	FRMPD1	Q5SYB0	1578 aa		33.43	■■■□□ 2.94
BCAR1-216	ENST00000564170	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.42	■■■□□ 2.94
BCAR1-216	ENST00000564170	ABCC1	P33527	1531 aa		33.41	■■■□□ 2.94
BCAR1-216	ENST00000564170	RAPGEF3	O95398	923 aa		33.4	■■■□□ 2.94
BCAR1-216	ENST00000564170	MYOM3	Q5VTT5	1437 aa		33.35	■■■□□ 2.93
BCAR1-216	ENST00000564170	POGZ	Q7Z3K3	1410 aa		33.35	■■■□□ 2.93
BCAR1-216	ENST00000564170	ARHGEF12	Q9NZN5	1544 aa		33.34	■■■□□ 2.93
BCAR1-216	ENST00000564170	SYCP2	Q9BX26	1530 aa		33.33	■■■□□ 2.93
BCAR1-216	ENST00000564170	PLEKHH2	Q8IVE3	1493 aa		33.31	■■■□□ 2.92
BCAR1-216	ENST00000564170	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.31	■■■□□ 2.92
BCAR1-216	ENST00000564170	ZNF644	Q9H582	1327 aa	Predicted RBP	33.29	■■■□□ 2.92
BCAR1-216	ENST00000564170	CAMSAP2	Q08AD1	1489 aa		33.28	■■■□□ 2.92
BCAR1-216	ENST00000564170	ZNF518A	Q6AHZ1	1483 aa		33.27	■■■□□ 2.92
BCAR1-216	ENST00000564170	ZMYM4	Q5VZL5	1548 aa		33.27	■■■□□ 2.92
BCAR1-216	ENST00000564170	MIA2	Q96PC5	1412 aa		33.27	■■■□□ 2.92
BCAR1-216	ENST00000564170	KIAA1107	Q9UPP5	1409 aa		33.27	■■■□□ 2.92
BCAR1-216	ENST00000564170	TRAPPC8	Q9Y2L5	1435 aa		33.26	■■■□□ 2.91
BCAR1-216	ENST00000564170	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.24	■■■□□ 2.91
BCAR1-216	ENST00000564170	KDM5C	P41229	1560 aa		33.24	■■■□□ 2.91
BCAR1-216	ENST00000564170	AFAP1	Q8N556	730 aa		33.22	■■■□□ 2.91
BCAR1-216	ENST00000564170	PTPN23	Q9H3S7	1636 aa		33.2	■■■□□ 2.91
BCAR1-216	ENST00000564170	FGD6	Q6ZV73	1430 aa		33.19	■■■□□ 2.9
BCAR1-216	ENST00000564170	MBD5	Q9P267	1494 aa		33.18	■■■□□ 2.9
BCAR1-216	ENST00000564170	HECW2	Q9P2P5	1572 aa		33.17	■■■□□ 2.9
BCAR1-216	ENST00000564170	MAGI2	Q86UL8	1455 aa		33.17	■■■□□ 2.9
BCAR1-216	ENST00000564170	ZFYVE16	Q7Z3T8	1539 aa		33.17	■■■□□ 2.9
BCAR1-216	ENST00000564170	ARHGEF40	Q8TER5	1519 aa		33.17	■■■□□ 2.9
BCAR1-216	ENST00000564170	ARHGEF5	Q12774	1597 aa		33.13	■■■□□ 2.89
BCAR1-216	ENST00000564170	YEATS2	Q9ULM3	1422 aa		33.11	■■■□□ 2.89
BCAR1-216	ENST00000564170	TCOF1	Q13428	1488 aa	Known RBP	33.11	■■■□□ 2.89
BCAR1-216	ENST00000564170	MLH3	Q9UHC1	1453 aa		33.11	■■■□□ 2.89
BCAR1-216	ENST00000564170	KIDINS220	Q9ULH0	1771 aa		33.1	■■■□□ 2.89
BCAR1-216	ENST00000564170	CCDC141	Q6ZP82	1450 aa		33.1	■■■□□ 2.89
BCAR1-216	ENST00000564170	MYT1L	Q9UL68	1186 aa		33.09	■■■□□ 2.89
BCAR1-216	ENST00000564170	SPAG9	O60271	1321 aa	Known RBP	33.06	■■■□□ 2.88
BCAR1-216	ENST00000564170	INO80	Q9ULG1	1556 aa	Predicted RBP	33.06	■■■□□ 2.88
BCAR1-216	ENST00000564170	ABCA6	Q8N139	1617 aa		33.06	■■■□□ 2.88
BCAR1-216	ENST00000564170	RSPH4A	Q5TD94	716 aa		33.05	■■■□□ 2.88
BCAR1-216	ENST00000564170	ATP7A	Q04656	1500 aa		33.04	■■■□□ 2.88
BCAR1-216	ENST00000564170	DIP2C	Q9Y2E4	1556 aa		33.04	■■■□□ 2.88
BCAR1-216	ENST00000564170	ATP10A	O60312	1499 aa		32.99	■■■□□ 2.87
BCAR1-216	ENST00000564170	DNMT1	P26358	1616 aa	Known RBP	32.99	■■■□□ 2.87
BCAR1-216	ENST00000564170	CROCC2	H7BZ55	1655 aa		32.99	■■■□□ 2.87
BCAR1-216	ENST00000564170	FAM50A	Q14320	339 aa	Known RBP	32.98	■■■□□ 2.87
BCAR1-216	ENST00000564170	SIGLEC1	Q9BZZ2	1709 aa		32.97	■■■□□ 2.87
BCAR1-216	ENST00000564170	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.95	■■■□□ 2.87
BCAR1-216	ENST00000564170	C9orf84	Q5VXU9	1444 aa		32.95	■■■□□ 2.87
BCAR1-216	ENST00000564170	MAST1	Q9Y2H9	1570 aa		32.95	■■■□□ 2.86
BCAR1-216	ENST00000564170	TSPY4	P0CV99	314 aa		32.94	■■■□□ 2.86
BCAR1-216	ENST00000564170	TSPY10	P0CW01	314 aa		32.94	■■■□□ 2.86
BCAR1-216	ENST00000564170	ABCC5	O15440	1437 aa		32.94	■■■□□ 2.86
BCAR1-216	ENST00000564170	DAPK1	P53355	1430 aa		32.93	■■■□□ 2.86
BCAR1-216	ENST00000564170	ADGB	Q8N7X0	1667 aa		32.91	■■■□□ 2.86
BCAR1-216	ENST00000564170	RERE	Q9P2R6	1566 aa		32.91	■■■□□ 2.86
BCAR1-216	ENST00000564170	SHANK2	Q9UPX8	1470 aa		32.88	■■■□□ 2.85
BCAR1-216	ENST00000564170	RRBP1	Q9P2E9	1410 aa	Known RBP	32.87	■■■□□ 2.85
BCAR1-216	ENST00000564170	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.87	■■■□□ 2.85
BCAR1-216	ENST00000564170	BCORL1	Q5H9F3	1711 aa		32.84	■■■□□ 2.85
BCAR1-216	ENST00000564170	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.83	■■■□□ 2.85
BCAR1-216	ENST00000564170	PLXNC1	O60486	1568 aa		32.83	■■■□□ 2.85
BCAR1-216	ENST00000564170	A2M	P01023	1474 aa		32.82	■■■□□ 2.84
BCAR1-216	ENST00000564170	AGL	P35573	1532 aa		32.79	■■■□□ 2.84
BCAR1-216	ENST00000564170	CHIC2	Q9UKJ5	165 aa		32.76	■■■□□ 2.83
BCAR1-216	ENST00000564170	KDM4F	A0A1W2PPD8	638 aa		32.75	■■■□□ 2.83
BCAR1-216	ENST00000564170	ADAMTSL3	P82987	1691 aa		32.75	■■■□□ 2.83
BCAR1-216	ENST00000564170	DHX29	Q7Z478	1369 aa	Known RBP	32.73	■■■□□ 2.83
BCAR1-216	ENST00000564170	PTPRK	Q15262	1439 aa		32.73	■■■□□ 2.83
BCAR1-216	ENST00000564170	ITGAE	P38570	1179 aa		32.71	■■■□□ 2.83
BCAR1-216	ENST00000564170	MLEC	Q14165	292 aa		32.71	■■■□□ 2.83
BCAR1-216	ENST00000564170	ADGRL2	O95490	1459 aa		32.71	■■■□□ 2.83
BCAR1-216	ENST00000564170	ANKRD30A	Q9BXX3	1397 aa		32.7	■■■□□ 2.82
BCAR1-216	ENST00000564170	KIF15	Q9NS87	1388 aa		32.69	■■■□□ 2.82
BCAR1-216	ENST00000564170	DUOX2	Q9NRD8	1548 aa		32.68	■■■□□ 2.82
BCAR1-216	ENST00000564170	MADD	Q8WXG6	1647 aa		32.68	■■■□□ 2.82
BCAR1-216	ENST00000564170	RRP7BP	Q9NSQ0	103 aa		32.67	■■■□□ 2.82
BCAR1-216	ENST00000564170	FER1L4	A9Z1Z3	1794 aa		32.67	■■■□□ 2.82
BCAR1-216	ENST00000564170	NCOA1	Q15788	1441 aa		32.67	■■■□□ 2.82
BCAR1-216	ENST00000564170	RIMS1	Q86UR5	1692 aa	Known RBP	32.62	■■■□□ 2.81
BCAR1-216	ENST00000564170	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.62	■■■□□ 2.81
BCAR1-216	ENST00000564170	KIF3B	O15066	747 aa		32.59	■■■□□ 2.81
BCAR1-216	ENST00000564170	ROCK1	Q13464	1354 aa		32.58	■■■□□ 2.81
BCAR1-216	ENST00000564170	ERBIN	Q96RT1	1412 aa		32.57	■■■□□ 2.8
BCAR1-216	ENST00000564170	GGT6	Q6P531	493 aa		32.55	■■■□□ 2.8
BCAR1-216	ENST00000564170	RNF17	Q9BXT8	1623 aa	Known RBP	32.55	■■■□□ 2.8
BCAR1-216	ENST00000564170	CLTC	Q00610	1675 aa	Known RBP	32.5	■■■□□ 2.79
BCAR1-216	ENST00000564170	PTPRM	P28827	1452 aa		32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms