RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ABCA9Q8IUA7 1624 aa32.98■■■□□ 2.87
LINC01960-201ENST00000563759 ARHGAP5Q13017 1502 aa32.97■■■□□ 2.87
LINC01960-201ENST00000563759 ZNF777Q9ULD5 760 aaPredicted RBP32.97■■■□□ 2.87
LINC01960-201ENST00000563759 ZNF644Q9H582 1327 aaPredicted RBP32.95■■■□□ 2.87
LINC01960-201ENST00000563759 MAPKBP1O60336 1514 aa32.95■■■□□ 2.87
LINC01960-201ENST00000563759 SAMD9LQ8IVG5 1584 aa32.92■■■□□ 2.86
LINC01960-201ENST00000563759 CROCC2H7BZ55 1655 aa32.9■■■□□ 2.86
LINC01960-201ENST00000563759 PTPRKQ15262 1439 aa32.9■■■□□ 2.86
LINC01960-201ENST00000563759 DAPK1P53355 1430 aa32.89■■■□□ 2.85
LINC01960-201ENST00000563759 PLCH2O75038 1416 aa32.88■■■□□ 2.85
LINC01960-201ENST00000563759 ARAP3Q8WWN8 1544 aa32.86■■■□□ 2.85
LINC01960-201ENST00000563759 ABCC5O15440 1437 aa32.82■■■□□ 2.85
LINC01960-201ENST00000563759 ADGBQ8N7X0 1667 aa32.82■■■□□ 2.84
LINC01960-201ENST00000563759 ARHGEF5Q12774 1597 aa32.8■■■□□ 2.84
LINC01960-201ENST00000563759 GCC2Q8IWJ2 1684 aa32.8■■■□□ 2.84
LINC01960-201ENST00000563759 SETD5Q9C0A6 1442 aa32.79■■■□□ 2.84
LINC01960-201ENST00000563759 SYCP2Q9BX26 1530 aa32.79■■■□□ 2.84
LINC01960-201ENST00000563759 PLEKHH2Q8IVE3 1493 aa32.78■■■□□ 2.84
LINC01960-201ENST00000563759 HFM1A2PYH4 1435 aa32.77■■■□□ 2.84
LINC01960-201ENST00000563759 CHIC2Q9UKJ5 165 aa32.76■■■□□ 2.83
LINC01960-201ENST00000563759 RAB3GAP2Q9H2M9 1393 aa32.75■■■□□ 2.83
LINC01960-201ENST00000563759 EFCAB2Q5VUJ9 269 aa32.74■■■□□ 2.83
LINC01960-201ENST00000563759 AKNAQ7Z591 1439 aa32.73■■■□□ 2.83
LINC01960-201ENST00000563759 ABCC1P33527 1531 aa32.73■■■□□ 2.83
LINC01960-201ENST00000563759 FANCAO15360 1455 aa32.72■■■□□ 2.83
LINC01960-201ENST00000563759 CCER1Q8TC90 406 aaPredicted RBP32.72■■■□□ 2.83
LINC01960-201ENST00000563759 MBD5Q9P267 1494 aa32.72■■■□□ 2.83
LINC01960-201ENST00000563759 SHANK2Q9UPX8 1470 aa32.72■■■□□ 2.83
LINC01960-201ENST00000563759 CCDC141Q6ZP82 1450 aa32.71■■■□□ 2.83
LINC01960-201ENST00000563759 CFAP74Q9C0B2 1584 aa32.69■■■□□ 2.82
LINC01960-201ENST00000563759 NAIPQ13075 1403 aa32.69■■■□□ 2.82
LINC01960-201ENST00000563759 KIAA1107Q9UPP5 1409 aa32.69■■■□□ 2.82
LINC01960-201ENST00000563759 HNRNPMP52272 730 aaKnown RBP eCLIP32.69■■■□□ 2.82
LINC01960-201ENST00000563759 ROCK1Q13464 1354 aa32.68■■■□□ 2.82
LINC01960-201ENST00000563759 CD109Q6YHK3 1445 aa32.68■■■□□ 2.82
LINC01960-201ENST00000563759 DIP2BQ9P265 1576 aa32.68■■■□□ 2.82
LINC01960-201ENST00000563759 MAP3K4Q9Y6R4 1608 aa32.67■■■□□ 2.82
LINC01960-201ENST00000563759 GLI2P10070 1586 aa32.67■■■□□ 2.82
LINC01960-201ENST00000563759 RRP7BPQ9NSQ0 103 aa32.65■■■□□ 2.82
LINC01960-201ENST00000563759 C9orf84Q5VXU9 1444 aa32.65■■■□□ 2.82
LINC01960-201ENST00000563759 ADGRL2O95490 1459 aa32.64■■■□□ 2.82
LINC01960-201ENST00000563759 RSPH4AQ5TD94 716 aa32.63■■■□□ 2.81
LINC01960-201ENST00000563759 ARHGEF12Q9NZN5 1544 aa32.62■■■□□ 2.81
LINC01960-201ENST00000563759 HRCP23327 699 aa32.61■■■□□ 2.81
LINC01960-201ENST00000563759 TSPY4P0CV99 314 aa32.6■■■□□ 2.81
LINC01960-201ENST00000563759 TSPY10P0CW01 314 aa32.6■■■□□ 2.81
LINC01960-201ENST00000563759 MAST1Q9Y2H9 1570 aa32.59■■■□□ 2.81
LINC01960-201ENST00000563759 ADGRL1O94910 1474 aa32.58■■■□□ 2.81
LINC01960-201ENST00000563759 ANKRD30AQ9BXX3 1397 aa32.58■■■□□ 2.81
LINC01960-201ENST00000563759 NCOA1Q15788 1441 aa32.57■■■□□ 2.8
LINC01960-201ENST00000563759 KIF13AQ9H1H9 1805 aa32.55■■■□□ 2.8
LINC01960-201ENST00000563759 KDM6BO15054 1643 aa32.55■■■□□ 2.8
LINC01960-201ENST00000563759 DHX57Q6P158 1386 aaKnown RBP32.53■■■□□ 2.8
LINC01960-201ENST00000563759 TSPOAP1O95153 1857 aa32.53■■■□□ 2.8
LINC01960-201ENST00000563759 TRAPPC8Q9Y2L5 1435 aa32.51■■■□□ 2.8
LINC01960-201ENST00000563759 FAM69CQ0P6D2 419 aa32.51■■■□□ 2.79
LINC01960-201ENST00000563759 PLXNC1O60486 1568 aa32.49■■■□□ 2.79
LINC01960-201ENST00000563759 SCAPERQ9BY12 1400 aa32.48■■■□□ 2.79
LINC01960-201ENST00000563759 NEO1Q92859 1461 aa32.48■■■□□ 2.79
LINC01960-201ENST00000563759 ZEB1P37275 1124 aaPredicted RBP32.45■■■□□ 2.79
LINC01960-201ENST00000563759 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
LINC01960-201ENST00000563759 KIF15Q9NS87 1388 aa32.44■■■□□ 2.78
LINC01960-201ENST00000563759 PPRC1Q5VV67 1664 aaKnown RBP32.43■■■□□ 2.78
LINC01960-201ENST00000563759 ZFYVE16Q7Z3T8 1539 aa32.42■■■□□ 2.78
LINC01960-201ENST00000563759 INO80Q9ULG1 1556 aaPredicted RBP32.41■■■□□ 2.78
LINC01960-201ENST00000563759 ZNF518AQ6AHZ1 1483 aa32.4■■■□□ 2.78
LINC01960-201ENST00000563759 ANKRD50Q9ULJ7 1429 aa32.39■■■□□ 2.78
LINC01960-201ENST00000563759 AFAP1Q8N556 730 aa32.38■■■□□ 2.77
LINC01960-201ENST00000563759 SPAG9O60271 1321 aaKnown RBP32.38■■■□□ 2.77
LINC01960-201ENST00000563759 ATP7AQ04656 1500 aa32.37■■■□□ 2.77
LINC01960-201ENST00000563759 POGZQ7Z3K3 1410 aa32.36■■■□□ 2.77
LINC01960-201ENST00000563759 TEX14Q8IWB6 1497 aa32.35■■■□□ 2.77
LINC01960-201ENST00000563759 RTEL1-TNFRSF6BF6WH68 1400 aa32.35■■■□□ 2.77
LINC01960-201ENST00000563759 ACIN1Q9UKV3 1341 aaKnown RBP32.34■■■□□ 2.77
LINC01960-201ENST00000563759 CLSPNQ9HAW4 1339 aa32.33■■■□□ 2.77
LINC01960-201ENST00000563759 KDM5CP41229 1560 aa32.33■■■□□ 2.77
LINC01960-201ENST00000563759 DUOX2Q9NRD8 1548 aa32.31■■■□□ 2.76
LINC01960-201ENST00000563759 TRIM52Q96A61 297 aa32.31■■■□□ 2.76
LINC01960-201ENST00000563759 RICTORQ6R327 1708 aa32.31■■■□□ 2.76
LINC01960-201ENST00000563759 DENND4BO75064 1496 aaPredicted RBP32.29■■■□□ 2.76
LINC01960-201ENST00000563759 KIDINS220Q9ULH0 1771 aa32.29■■■□□ 2.76
LINC01960-201ENST00000563759 HECW2Q9P2P5 1572 aa32.29■■■□□ 2.76
LINC01960-201ENST00000563759 MYT1LQ9UL68 1186 aa32.27■■■□□ 2.76
LINC01960-201ENST00000563759 ERBINQ96RT1 1412 aa32.23■■■□□ 2.75
LINC01960-201ENST00000563759 MLH3Q9UHC1 1453 aa32.19■■■□□ 2.74
LINC01960-201ENST00000563759 FRMPD1Q5SYB0 1578 aa32.19■■■□□ 2.74
LINC01960-201ENST00000563759 UNC13BO14795 1591 aa32.18■■■□□ 2.74
LINC01960-201ENST00000563759 RAPGEF3O95398 923 aa32.16■■■□□ 2.74
LINC01960-201ENST00000563759 KDM5DQ9BY66 1539 aa32.16■■■□□ 2.74
LINC01960-201ENST00000563759 ABCA6Q8N139 1617 aa32.14■■■□□ 2.74
LINC01960-201ENST00000563759 PZPP20742 1482 aa32.13■■■□□ 2.73
LINC01960-201ENST00000563759 MPHOSPH9Q99550 1183 aa32.13■■■□□ 2.73
LINC01960-201ENST00000563759 EIF2AK4Q9P2K8 1649 aaKnown RBP32.13■■■□□ 2.73
LINC01960-201ENST00000563759 NUP155O75694 1391 aa32.1■■■□□ 2.73
LINC01960-201ENST00000563759 ZMYM4Q5VZL5 1548 aa32.1■■■□□ 2.73
LINC01960-201ENST00000563759 SLC4A1APQ9BWU0 796 aaKnown RBP32.09■■■□□ 2.73
LINC01960-201ENST00000563759 DEPDC5O75140 1603 aa32.06■■■□□ 2.72
LINC01960-201ENST00000563759 DIP2CQ9Y2E4 1556 aa32.06■■■□□ 2.72
LINC01960-201ENST00000563759 MAGI2Q86UL8 1455 aa32.06■■■□□ 2.72
LINC01960-201ENST00000563759 IQGAP3Q86VI3 1631 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms