RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 ST18O60284 1047 aa16.41■□□□□ 0.22
AC027458.1-201ENST00000563639 HOXB3P14651 431 aaPredicted RBP16.41■□□□□ 0.22
AC027458.1-201ENST00000563639 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
AC027458.1-201ENST00000563639 TMC2Q8TDI7 906 aa16.37■□□□□ 0.21
AC027458.1-201ENST00000563639 SPRYD3Q8NCJ5 442 aa16.35■□□□□ 0.21
AC027458.1-201ENST00000563639 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
AC027458.1-201ENST00000563639 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
AC027458.1-201ENST00000563639 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
AC027458.1-201ENST00000563639 POTEGQ6S5H5 508 aa16.29■□□□□ 0.2
AC027458.1-201ENST00000563639 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
AC027458.1-201ENST00000563639 PLSCR2Q9NRY7 297 aa16.29■□□□□ 0.2
AC027458.1-201ENST00000563639 POTEMA6NI47 508 aa16.28■□□□□ 0.2
AC027458.1-201ENST00000563639 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
AC027458.1-201ENST00000563639 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
AC027458.1-201ENST00000563639 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.2
AC027458.1-201ENST00000563639 FOXK1P85037 733 aa16.25■□□□□ 0.19
AC027458.1-201ENST00000563639 ZNF710Q8N1W2 664 aa16.25■□□□□ 0.19
AC027458.1-201ENST00000563639 DSG2Q14126 1118 aa16.24■□□□□ 0.19
AC027458.1-201ENST00000563639 MARVELD3Q96A59 401 aa16.22■□□□□ 0.19
AC027458.1-201ENST00000563639 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
AC027458.1-201ENST00000563639 HOXB1P14653 301 aaPredicted RBP16.2■□□□□ 0.18
AC027458.1-201ENST00000563639 PLPP6Q8IY26 295 aa16.2■□□□□ 0.18
AC027458.1-201ENST00000563639 PDE4AP27815 886 aa16.19■□□□□ 0.18
AC027458.1-201ENST00000563639 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
AC027458.1-201ENST00000563639 GPR153Q6NV75 609 aa16.18■□□□□ 0.18
AC027458.1-201ENST00000563639 SLC34A2O95436 690 aa16.17■□□□□ 0.18
AC027458.1-201ENST00000563639 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
AC027458.1-201ENST00000563639 PPP1R15BQ5SWA1 713 aa16.14■□□□□ 0.17
AC027458.1-201ENST00000563639 EMP3P54852 163 aa16.13■□□□□ 0.17
AC027458.1-201ENST00000563639 ARSIQ5FYB1 569 aa16.12■□□□□ 0.17
AC027458.1-201ENST00000563639 MFSD10Q14728 455 aa16.11■□□□□ 0.17
AC027458.1-201ENST00000563639 KHSRPQ92945 711 aaKnown RBP eCLIP16.1■□□□□ 0.17
AC027458.1-201ENST00000563639 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
AC027458.1-201ENST00000563639 PCDHGA4Q9Y5G9 962 aa16.09■□□□□ 0.17
AC027458.1-201ENST00000563639 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
AC027458.1-201ENST00000563639 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
AC027458.1-201ENST00000563639 POTEB3A0JP26 581 aa16.04■□□□□ 0.16
AC027458.1-201ENST00000563639 POTEBQ6S5H4 581 aa16.04■□□□□ 0.16
AC027458.1-201ENST00000563639 HS3ST6Q96QI5 342 aa16.02■□□□□ 0.16
AC027458.1-201ENST00000563639 NUDT7P0C024 238 aa16.01■□□□□ 0.15
AC027458.1-201ENST00000563639 OXER1Q8TDS5 423 aa16■□□□□ 0.15
AC027458.1-201ENST00000563639 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
AC027458.1-201ENST00000563639 ERBB3P21860 1342 aa15.98■□□□□ 0.15
AC027458.1-201ENST00000563639 PLCB2Q00722 1185 aa15.98■□□□□ 0.15
AC027458.1-201ENST00000563639 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
AC027458.1-201ENST00000563639 KDM4FA0A1W2PPD8 638 aa15.97■□□□□ 0.15
AC027458.1-201ENST00000563639 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC027458.1-201ENST00000563639 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
AC027458.1-201ENST00000563639 EMILIN3Q9NT22 766 aa15.95■□□□□ 0.14
AC027458.1-201ENST00000563639 VARS2Q5ST30 1063 aaKnown RBP15.94■□□□□ 0.14
AC027458.1-201ENST00000563639 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
AC027458.1-201ENST00000563639 TBC1D12O60347 775 aa15.92■□□□□ 0.14
AC027458.1-201ENST00000563639 CAMK2BQ13554 666 aa15.91■□□□□ 0.14
AC027458.1-201ENST00000563639 LHX6Q9UPM6 363 aa15.91■□□□□ 0.14
AC027458.1-201ENST00000563639 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
AC027458.1-201ENST00000563639 ZNF687Q8N1G0 1237 aa15.81■□□□□ 0.12
AC027458.1-201ENST00000563639 KRTAP3-3Q9BYR6 98 aa15.81■□□□□ 0.12
AC027458.1-201ENST00000563639 KRTAP3-2Q9BYR7 98 aa15.81■□□□□ 0.12
AC027458.1-201ENST00000563639 WDR70Q9NW82 654 aa15.81■□□□□ 0.12
AC027458.1-201ENST00000563639 EVI5O60447 810 aa15.78■□□□□ 0.12
AC027458.1-201ENST00000563639 E2F4Q16254 413 aa15.78■□□□□ 0.12
AC027458.1-201ENST00000563639 DPYSL4O14531 572 aa15.77■□□□□ 0.12
AC027458.1-201ENST00000563639 ANO8Q9HCE9 1232 aaPredicted RBP15.77■□□□□ 0.12
AC027458.1-201ENST00000563639 PSDA5PKW4 1024 aaPredicted RBP15.74■□□□□ 0.11
AC027458.1-201ENST00000563639 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
AC027458.1-201ENST00000563639 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
AC027458.1-201ENST00000563639 FOSBP53539 338 aa15.67■□□□□ 0.1
AC027458.1-201ENST00000563639 PPP4R3BQ5MIZ7 849 aa15.67■□□□□ 0.1
AC027458.1-201ENST00000563639 ZNF454Q8N9F8 522 aa15.67■□□□□ 0.1
AC027458.1-201ENST00000563639 ARIH1Q9Y4X5 557 aaPredicted RBP15.67■□□□□ 0.1
AC027458.1-201ENST00000563639 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
AC027458.1-201ENST00000563639 PDIA6Q15084 440 aa15.64■□□□□ 0.09
AC027458.1-201ENST00000563639 AXIN2Q9Y2T1 843 aa15.64■□□□□ 0.09
AC027458.1-201ENST00000563639 PBX2P40425 430 aa15.63■□□□□ 0.09
AC027458.1-201ENST00000563639 KCNV2Q8TDN2 545 aa15.61■□□□□ 0.09
AC027458.1-201ENST00000563639 PCDHGA10Q9Y5H3 936 aa15.59■□□□□ 0.09
AC027458.1-201ENST00000563639 ARHGAP33O14559 1287 aa15.58■□□□□ 0.08
AC027458.1-201ENST00000563639 SPNS2Q8IVW8 549 aa15.58■□□□□ 0.08
AC027458.1-201ENST00000563639 SPDYE16A6NNV3 312 aaPredicted RBP15.57■□□□□ 0.08
AC027458.1-201ENST00000563639 LSM11P83369 360 aaKnown RBP eCLIP15.57■□□□□ 0.08
AC027458.1-201ENST00000563639 KDM2AQ9Y2K7 1162 aa15.57■□□□□ 0.08
AC027458.1-201ENST00000563639 PTGER2P43116 358 aa15.56■□□□□ 0.08
AC027458.1-201ENST00000563639 PHF14O94880 888 aa15.55■□□□□ 0.08
AC027458.1-201ENST00000563639 PSEN2P49810 448 aa15.55■□□□□ 0.08
AC027458.1-201ENST00000563639 ZDHHC16Q969W1 377 aa15.55■□□□□ 0.08
AC027458.1-201ENST00000563639 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
AC027458.1-201ENST00000563639 ADAM33Q9BZ11 813 aa15.54■□□□□ 0.08
AC027458.1-201ENST00000563639 DDX12PQ92771 950 aa15.53■□□□□ 0.08
AC027458.1-201ENST00000563639 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.08
AC027458.1-201ENST00000563639 ARHGEF1Q92888 912 aaKnown RBP15.52■□□□□ 0.08
AC027458.1-201ENST00000563639 KCNK17Q96T54 332 aa15.52■□□□□ 0.08
AC027458.1-201ENST00000563639 DMRTA1Q5VZB9 504 aa15.51■□□□□ 0.07
AC027458.1-201ENST00000563639 TYW1BQ6NUM6 668 aa15.5■□□□□ 0.07
AC027458.1-201ENST00000563639 P3H3Q8IVL6 736 aa15.48■□□□□ 0.07
AC027458.1-201ENST00000563639 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
AC027458.1-201ENST00000563639 EPAS1Q99814 870 aa15.47■□□□□ 0.07
AC027458.1-201ENST00000563639 PTPREP23469 700 aa15.46■□□□□ 0.07
AC027458.1-201ENST00000563639 MMRN1Q13201 1228 aa15.45■□□□□ 0.06
AC027458.1-201ENST00000563639 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
AC027458.1-201ENST00000563639 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms