RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
SPG7-206ENST00000562775 ZNF777Q9ULD5 760 aaPredicted RBP21.03■□□□□ 0.96
SPG7-206ENST00000562775 DNMT1P26358 1616 aaKnown RBP21.02■□□□□ 0.96
SPG7-206ENST00000562775 PLCH2O75038 1416 aa21.01■□□□□ 0.95
SPG7-206ENST00000562775 DAPK1P53355 1430 aa21.01■□□□□ 0.95
SPG7-206ENST00000562775 ABCA9Q8IUA7 1624 aa21■□□□□ 0.95
SPG7-206ENST00000562775 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
SPG7-206ENST00000562775 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
SPG7-206ENST00000562775 SETD5Q9C0A6 1442 aa20.99■□□□□ 0.95
SPG7-206ENST00000562775 ABCC5O15440 1437 aa20.98■□□□□ 0.95
SPG7-206ENST00000562775 ARAP3Q8WWN8 1544 aa20.98■□□□□ 0.95
SPG7-206ENST00000562775 SAMD9LQ8IVG5 1584 aa20.96■□□□□ 0.95
SPG7-206ENST00000562775 HRCP23327 699 aa20.95■□□□□ 0.94
SPG7-206ENST00000562775 EFCAB2Q5VUJ9 269 aa20.95■□□□□ 0.94
SPG7-206ENST00000562775 HFM1A2PYH4 1435 aa20.95■□□□□ 0.94
SPG7-206ENST00000562775 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
SPG7-206ENST00000562775 RAB3GAP2Q9H2M9 1393 aa20.94■□□□□ 0.94
SPG7-206ENST00000562775 CCER1Q8TC90 406 aaPredicted RBP20.94■□□□□ 0.94
SPG7-206ENST00000562775 PLEKHH2Q8IVE3 1493 aa20.94■□□□□ 0.94
SPG7-206ENST00000562775 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
SPG7-206ENST00000562775 ARHGEF5Q12774 1597 aa20.92■□□□□ 0.94
SPG7-206ENST00000562775 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
SPG7-206ENST00000562775 MBD5Q9P267 1494 aa20.92■□□□□ 0.94
SPG7-206ENST00000562775 NAIPQ13075 1403 aa20.91■□□□□ 0.94
SPG7-206ENST00000562775 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
SPG7-206ENST00000562775 RSPH4AQ5TD94 716 aa20.91■□□□□ 0.94
SPG7-206ENST00000562775 CROCC2H7BZ55 1655 aa20.91■□□□□ 0.94
SPG7-206ENST00000562775 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.93
SPG7-206ENST00000562775 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.93
SPG7-206ENST00000562775 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
SPG7-206ENST00000562775 SYCP2Q9BX26 1530 aa20.87■□□□□ 0.93
SPG7-206ENST00000562775 GCC2Q8IWJ2 1684 aa20.87■□□□□ 0.93
SPG7-206ENST00000562775 RRP7BPQ9NSQ0 103 aa20.87■□□□□ 0.93
SPG7-206ENST00000562775 CD109Q6YHK3 1445 aa20.86■□□□□ 0.93
SPG7-206ENST00000562775 FANCAO15360 1455 aa20.86■□□□□ 0.93
SPG7-206ENST00000562775 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
SPG7-206ENST00000562775 TSPY4P0CV99 314 aa20.85■□□□□ 0.93
SPG7-206ENST00000562775 TSPY10P0CW01 314 aa20.85■□□□□ 0.93
SPG7-206ENST00000562775 ZEB1P37275 1124 aaPredicted RBP20.85■□□□□ 0.93
SPG7-206ENST00000562775 ABCC1P33527 1531 aa20.85■□□□□ 0.93
SPG7-206ENST00000562775 ADGBQ8N7X0 1667 aa20.85■□□□□ 0.93
SPG7-206ENST00000562775 GLI2P10070 1586 aa20.84■□□□□ 0.93
SPG7-206ENST00000562775 NCOA1Q15788 1441 aa20.83■□□□□ 0.93
SPG7-206ENST00000562775 C9orf84Q5VXU9 1444 aa20.83■□□□□ 0.93
SPG7-206ENST00000562775 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.92
SPG7-206ENST00000562775 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
SPG7-206ENST00000562775 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
SPG7-206ENST00000562775 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
SPG7-206ENST00000562775 CFAP74Q9C0B2 1584 aa20.79■□□□□ 0.92
SPG7-206ENST00000562775 MAP3K4Q9Y6R4 1608 aa20.78■□□□□ 0.92
SPG7-206ENST00000562775 DIP2BQ9P265 1576 aa20.78■□□□□ 0.92
SPG7-206ENST00000562775 ADGRL1O94910 1474 aa20.77■□□□□ 0.92
SPG7-206ENST00000562775 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
SPG7-206ENST00000562775 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
SPG7-206ENST00000562775 TRAPPC8Q9Y2L5 1435 aa20.76■□□□□ 0.91
SPG7-206ENST00000562775 FAM69CQ0P6D2 419 aa20.74■□□□□ 0.91
SPG7-206ENST00000562775 KDM6BO15054 1643 aa20.74■□□□□ 0.91
SPG7-206ENST00000562775 SCAPERQ9BY12 1400 aa20.74■□□□□ 0.91
SPG7-206ENST00000562775 NEO1Q92859 1461 aa20.73■□□□□ 0.91
SPG7-206ENST00000562775 KIF15Q9NS87 1388 aa20.7■□□□□ 0.9
SPG7-206ENST00000562775 PLXNC1O60486 1568 aa20.7■□□□□ 0.9
SPG7-206ENST00000562775 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
SPG7-206ENST00000562775 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
SPG7-206ENST00000562775 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
SPG7-206ENST00000562775 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
SPG7-206ENST00000562775 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
SPG7-206ENST00000562775 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
SPG7-206ENST00000562775 ZNF518AQ6AHZ1 1483 aa20.65■□□□□ 0.9
SPG7-206ENST00000562775 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.9
SPG7-206ENST00000562775 KIF13AQ9H1H9 1805 aa20.64■□□□□ 0.9
SPG7-206ENST00000562775 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
SPG7-206ENST00000562775 POGZQ7Z3K3 1410 aa20.63■□□□□ 0.89
SPG7-206ENST00000562775 DUOX2Q9NRD8 1548 aa20.62■□□□□ 0.89
SPG7-206ENST00000562775 TEX14Q8IWB6 1497 aa20.62■□□□□ 0.89
SPG7-206ENST00000562775 ATP7AQ04656 1500 aa20.62■□□□□ 0.89
SPG7-206ENST00000562775 DENND4BO75064 1496 aaPredicted RBP20.61■□□□□ 0.89
SPG7-206ENST00000562775 PPRC1Q5VV67 1664 aaKnown RBP20.61■□□□□ 0.89
SPG7-206ENST00000562775 KDM5CP41229 1560 aa20.6■□□□□ 0.89
SPG7-206ENST00000562775 TSPOAP1O95153 1857 aa20.59■□□□□ 0.89
SPG7-206ENST00000562775 ERBINQ96RT1 1412 aa20.58■□□□□ 0.88
SPG7-206ENST00000562775 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
SPG7-206ENST00000562775 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
SPG7-206ENST00000562775 KIDINS220Q9ULH0 1771 aa20.56■□□□□ 0.88
SPG7-206ENST00000562775 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
SPG7-206ENST00000562775 PZPP20742 1482 aa20.54■□□□□ 0.88
SPG7-206ENST00000562775 RICTORQ6R327 1708 aa20.54■□□□□ 0.88
SPG7-206ENST00000562775 KDM5DQ9BY66 1539 aa20.53■□□□□ 0.88
SPG7-206ENST00000562775 HECW2Q9P2P5 1572 aa20.53■□□□□ 0.88
SPG7-206ENST00000562775 NUP155O75694 1391 aa20.52■□□□□ 0.88
SPG7-206ENST00000562775 RAPGEF3O95398 923 aa20.52■□□□□ 0.88
SPG7-206ENST00000562775 SLC4A1APQ9BWU0 796 aaKnown RBP20.52■□□□□ 0.88
SPG7-206ENST00000562775 UNC13BO14795 1591 aa20.51■□□□□ 0.87
SPG7-206ENST00000562775 DHX29Q7Z478 1369 aaKnown RBP20.5■□□□□ 0.87
SPG7-206ENST00000562775 FRMPD1Q5SYB0 1578 aa20.47■□□□□ 0.87
SPG7-206ENST00000562775 EIF2AK4Q9P2K8 1649 aaKnown RBP20.47■□□□□ 0.87
SPG7-206ENST00000562775 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
SPG7-206ENST00000562775 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
SPG7-206ENST00000562775 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
SPG7-206ENST00000562775 A2MP01023 1474 aa20.45■□□□□ 0.86
SPG7-206ENST00000562775 ABCA6Q8N139 1617 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms