RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ARAP3Q8WWN8 1544 aa34.92■■■■□ 3.18
SYNGR3-202ENST00000562045 ARHGAP5Q13017 1502 aa34.91■■■■□ 3.18
SYNGR3-202ENST00000562045 CFAP74Q9C0B2 1584 aa34.89■■■■□ 3.18
SYNGR3-202ENST00000562045 AKNAQ7Z591 1439 aa34.89■■■■□ 3.18
SYNGR3-202ENST00000562045 CCNB3Q8WWL7 1395 aa34.87■■■■□ 3.17
SYNGR3-202ENST00000562045 EFCAB2Q5VUJ9 269 aa34.84■■■■□ 3.17
SYNGR3-202ENST00000562045 PHLDB1Q86UU1 1377 aa34.81■■■■□ 3.16
SYNGR3-202ENST00000562045 ITSN2Q9NZM3 1697 aa34.8■■■■□ 3.16
SYNGR3-202ENST00000562045 ADGRL1O94910 1474 aa34.79■■■■□ 3.16
SYNGR3-202ENST00000562045 FRMPD1Q5SYB0 1578 aa34.78■■■■□ 3.16
SYNGR3-202ENST00000562045 SAMD9LQ8IVG5 1584 aa34.78■■■■□ 3.16
SYNGR3-202ENST00000562045 RAPGEF3O95398 923 aa34.77■■■■□ 3.16
SYNGR3-202ENST00000562045 PPARGC1BQ86YN6 1023 aaKnown RBP34.77■■■■□ 3.16
SYNGR3-202ENST00000562045 RICTORQ6R327 1708 aa34.75■■■■□ 3.15
SYNGR3-202ENST00000562045 CFDP1Q9UEE9 299 aaPredicted RBP34.75■■■■□ 3.15
SYNGR3-202ENST00000562045 ZNF777Q9ULD5 760 aaPredicted RBP34.75■■■■□ 3.15
SYNGR3-202ENST00000562045 SCAPERQ9BY12 1400 aa34.74■■■■□ 3.15
SYNGR3-202ENST00000562045 ABCC1P33527 1531 aa34.72■■■■□ 3.15
SYNGR3-202ENST00000562045 ARHGEF12Q9NZN5 1544 aa34.72■■■■□ 3.15
SYNGR3-202ENST00000562045 ZNF644Q9H582 1327 aaPredicted RBP34.71■■■■□ 3.15
SYNGR3-202ENST00000562045 DENND4BO75064 1496 aaPredicted RBP34.71■■■■□ 3.15
SYNGR3-202ENST00000562045 MYOM3Q5VTT5 1437 aa34.65■■■■□ 3.14
SYNGR3-202ENST00000562045 SYCP2Q9BX26 1530 aa34.65■■■■□ 3.14
SYNGR3-202ENST00000562045 POGZQ7Z3K3 1410 aa34.65■■■■□ 3.14
SYNGR3-202ENST00000562045 TRAPPC8Q9Y2L5 1435 aa34.62■■■■□ 3.13
SYNGR3-202ENST00000562045 HNRNPMP52272 730 aaKnown RBP eCLIP34.6■■■■□ 3.13
SYNGR3-202ENST00000562045 AFAP1Q8N556 730 aa34.6■■■■□ 3.13
SYNGR3-202ENST00000562045 CAMSAP2Q08AD1 1489 aa34.6■■■■□ 3.13
SYNGR3-202ENST00000562045 ZMYM4Q5VZL5 1548 aa34.55■■■■□ 3.12
SYNGR3-202ENST00000562045 ZNF518AQ6AHZ1 1483 aa34.55■■■■□ 3.12
SYNGR3-202ENST00000562045 KDM5CP41229 1560 aa34.54■■■■□ 3.12
SYNGR3-202ENST00000562045 KIAA1107Q9UPP5 1409 aa34.54■■■■□ 3.12
SYNGR3-202ENST00000562045 MIA2Q96PC5 1412 aa34.53■■■■□ 3.12
SYNGR3-202ENST00000562045 PLEKHH2Q8IVE3 1493 aa34.53■■■■□ 3.12
SYNGR3-202ENST00000562045 MBD5Q9P267 1494 aa34.53■■■■□ 3.12
SYNGR3-202ENST00000562045 FGD6Q6ZV73 1430 aa34.51■■■■□ 3.11
SYNGR3-202ENST00000562045 PTPN23Q9H3S7 1636 aa34.5■■■■□ 3.11
SYNGR3-202ENST00000562045 YEATS2Q9ULM3 1422 aa34.48■■■■□ 3.11
SYNGR3-202ENST00000562045 HECW2Q9P2P5 1572 aa34.44■■■■□ 3.1
SYNGR3-202ENST00000562045 ARHGEF40Q8TER5 1519 aa34.43■■■■□ 3.1
SYNGR3-202ENST00000562045 TRIM26Q12899 539 aaPredicted RBP34.43■■■■□ 3.1
SYNGR3-202ENST00000562045 ZFYVE16Q7Z3T8 1539 aa34.43■■■■□ 3.1
SYNGR3-202ENST00000562045 KIDINS220Q9ULH0 1771 aa34.41■■■■□ 3.1
SYNGR3-202ENST00000562045 TCOF1Q13428 1488 aaKnown RBP34.41■■■■□ 3.1
SYNGR3-202ENST00000562045 MAGI2Q86UL8 1455 aa34.4■■■■□ 3.1
SYNGR3-202ENST00000562045 ARHGEF5Q12774 1597 aa34.39■■■■□ 3.1
SYNGR3-202ENST00000562045 MLH3Q9UHC1 1453 aa34.39■■■■□ 3.1
SYNGR3-202ENST00000562045 CCDC141Q6ZP82 1450 aa34.37■■■■□ 3.09
SYNGR3-202ENST00000562045 SIGLEC1Q9BZZ2 1709 aa34.37■■■■□ 3.09
SYNGR3-202ENST00000562045 ABCA6Q8N139 1617 aa34.37■■■■□ 3.09
SYNGR3-202ENST00000562045 INO80Q9ULG1 1556 aaPredicted RBP34.36■■■■□ 3.09
SYNGR3-202ENST00000562045 MYT1LQ9UL68 1186 aa34.34■■■■□ 3.09
SYNGR3-202ENST00000562045 DIP2CQ9Y2E4 1556 aa34.34■■■■□ 3.09
SYNGR3-202ENST00000562045 SPAG9O60271 1321 aaKnown RBP34.34■■■■□ 3.09
SYNGR3-202ENST00000562045 ATP7AQ04656 1500 aa34.32■■■■□ 3.08
SYNGR3-202ENST00000562045 FAM50AQ14320 339 aaKnown RBP34.29■■■■□ 3.08
SYNGR3-202ENST00000562045 DNMT1P26358 1616 aaKnown RBP34.27■■■■□ 3.08
SYNGR3-202ENST00000562045 ABCC5O15440 1437 aa34.27■■■■□ 3.08
SYNGR3-202ENST00000562045 CROCC2H7BZ55 1655 aa34.27■■■■□ 3.08
SYNGR3-202ENST00000562045 RSPH4AQ5TD94 716 aa34.27■■■■□ 3.08
SYNGR3-202ENST00000562045 ATP10AO60312 1499 aa34.26■■■■□ 3.08
SYNGR3-202ENST00000562045 DAPK1P53355 1430 aa34.24■■■■□ 3.07
SYNGR3-202ENST00000562045 PCGF6Q9BYE7 350 aa34.22■■■■□ 3.07
SYNGR3-202ENST00000562045 RTEL1-TNFRSF6BF6WH68 1400 aa34.21■■■■□ 3.07
SYNGR3-202ENST00000562045 C9orf84Q5VXU9 1444 aa34.21■■■■□ 3.07
SYNGR3-202ENST00000562045 MAST1Q9Y2H9 1570 aa34.21■■■■□ 3.07
SYNGR3-202ENST00000562045 ADGBQ8N7X0 1667 aa34.2■■■■□ 3.06
SYNGR3-202ENST00000562045 RRBP1Q9P2E9 1410 aaKnown RBP34.19■■■■□ 3.06
SYNGR3-202ENST00000562045 TSPY4P0CV99 314 aa34.18■■■■□ 3.06
SYNGR3-202ENST00000562045 TSPY10P0CW01 314 aa34.18■■■■□ 3.06
SYNGR3-202ENST00000562045 REREQ9P2R6 1566 aa34.15■■■■□ 3.06
SYNGR3-202ENST00000562045 SHANK2Q9UPX8 1470 aa34.14■■■■□ 3.06
SYNGR3-202ENST00000562045 ARID4BQ4LE39 1312 aaPredicted RBP34.13■■■■□ 3.05
SYNGR3-202ENST00000562045 PTPRKQ15262 1439 aa34.13■■■■□ 3.05
SYNGR3-202ENST00000562045 CHIC2Q9UKJ5 165 aa34.11■■■■□ 3.05
SYNGR3-202ENST00000562045 PLXNC1O60486 1568 aa34.11■■■■□ 3.05
SYNGR3-202ENST00000562045 A2MP01023 1474 aa34.11■■■■□ 3.05
SYNGR3-202ENST00000562045 KDM4FA0A1W2PPD8 638 aa34.1■■■■□ 3.05
SYNGR3-202ENST00000562045 BCORL1Q5H9F3 1711 aa34.1■■■■□ 3.05
SYNGR3-202ENST00000562045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.09■■■■□ 3.05
SYNGR3-202ENST00000562045 ITGAEP38570 1179 aa34.05■■■■□ 3.04
SYNGR3-202ENST00000562045 AGLP35573 1532 aa34.04■■■■□ 3.04
SYNGR3-202ENST00000562045 MLECQ14165 292 aa34.03■■■■□ 3.04
SYNGR3-202ENST00000562045 ADAMTSL3P82987 1691 aa34.02■■■■□ 3.04
SYNGR3-202ENST00000562045 DHX29Q7Z478 1369 aaKnown RBP34.02■■■■□ 3.04
SYNGR3-202ENST00000562045 RRP7BPQ9NSQ0 103 aa34■■■■□ 3.03
SYNGR3-202ENST00000562045 ADGRL2O95490 1459 aa33.98■■■■□ 3.03
SYNGR3-202ENST00000562045 NCOA1Q15788 1441 aa33.98■■■■□ 3.03
SYNGR3-202ENST00000562045 KIF15Q9NS87 1388 aa33.97■■■■□ 3.03
SYNGR3-202ENST00000562045 MADDQ8WXG6 1647 aa33.97■■■■□ 3.03
SYNGR3-202ENST00000562045 ANKRD30AQ9BXX3 1397 aa33.95■■■■□ 3.02
SYNGR3-202ENST00000562045 DUOX2Q9NRD8 1548 aa33.93■■■■□ 3.02
SYNGR3-202ENST00000562045 FER1L4A9Z1Z3 1794 aa33.9■■■■□ 3.02
SYNGR3-202ENST00000562045 RIMS1Q86UR5 1692 aaKnown RBP33.88■■■■□ 3.01
SYNGR3-202ENST00000562045 KIF3BO15066 747 aa33.87■■■■□ 3.01
SYNGR3-202ENST00000562045 EIF2AK4Q9P2K8 1649 aaKnown RBP33.84■■■■□ 3.01
SYNGR3-202ENST00000562045 GGT6Q6P531 493 aa33.84■■■■□ 3.01
SYNGR3-202ENST00000562045 ROCK1Q13464 1354 aa33.84■■■■□ 3.01
SYNGR3-202ENST00000562045 ERBINQ96RT1 1412 aa33.82■■■■□ 3
SYNGR3-202ENST00000562045 RNF17Q9BXT8 1623 aaKnown RBP33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms