RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
USB1-204ENST00000561568 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
USB1-204ENST00000561568 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
USB1-204ENST00000561568 CFAP74Q9C0B2 1584 aa25.35■■□□□ 1.65
USB1-204ENST00000561568 COL17A1Q9UMD9 1497 aaPredicted RBP25.34■■□□□ 1.65
USB1-204ENST00000561568 KDM6BO15054 1643 aa25.34■■□□□ 1.65
USB1-204ENST00000561568 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
USB1-204ENST00000561568 PREX2Q70Z35 1606 aa25.32■■□□□ 1.64
USB1-204ENST00000561568 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
USB1-204ENST00000561568 SCAPERQ9BY12 1400 aa25.3■■□□□ 1.64
USB1-204ENST00000561568 RAPGEF3O95398 923 aa25.3■■□□□ 1.64
USB1-204ENST00000561568 ADGRL1O94910 1474 aa25.29■■□□□ 1.64
USB1-204ENST00000561568 DENND4BO75064 1496 aaPredicted RBP25.28■■□□□ 1.64
USB1-204ENST00000561568 PPARGC1BQ86YN6 1023 aaKnown RBP25.28■■□□□ 1.64
USB1-204ENST00000561568 MYOM3Q5VTT5 1437 aa25.26■■□□□ 1.63
USB1-204ENST00000561568 ITSN2Q9NZM3 1697 aa25.26■■□□□ 1.63
USB1-204ENST00000561568 MIA2Q96PC5 1412 aa25.25■■□□□ 1.63
USB1-204ENST00000561568 PLEKHH2Q8IVE3 1493 aa25.24■■□□□ 1.63
USB1-204ENST00000561568 HNRNPMP52272 730 aaKnown RBP eCLIP25.24■■□□□ 1.63
USB1-204ENST00000561568 KIAA1107Q9UPP5 1409 aa25.23■■□□□ 1.63
USB1-204ENST00000561568 ZNF644Q9H582 1327 aaPredicted RBP25.23■■□□□ 1.63
USB1-204ENST00000561568 RSPH4AQ5TD94 716 aa25.23■■□□□ 1.63
USB1-204ENST00000561568 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
USB1-204ENST00000561568 POGZQ7Z3K3 1410 aa25.17■■□□□ 1.62
USB1-204ENST00000561568 SAMD9LQ8IVG5 1584 aa25.17■■□□□ 1.62
USB1-204ENST00000561568 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
USB1-204ENST00000561568 ABCC1P33527 1531 aa25.16■■□□□ 1.62
USB1-204ENST00000561568 ARHGEF12Q9NZN5 1544 aa25.16■■□□□ 1.62
USB1-204ENST00000561568 MYT1LQ9UL68 1186 aa25.14■■□□□ 1.62
USB1-204ENST00000561568 TRAPPC8Q9Y2L5 1435 aa25.13■■□□□ 1.61
USB1-204ENST00000561568 FGD6Q6ZV73 1430 aa25.12■■□□□ 1.61
USB1-204ENST00000561568 CAMSAP2Q08AD1 1489 aa25.12■■□□□ 1.61
USB1-204ENST00000561568 MAGI2Q86UL8 1455 aa25.11■■□□□ 1.61
USB1-204ENST00000561568 RICTORQ6R327 1708 aa25.11■■□□□ 1.61
USB1-204ENST00000561568 MBD5Q9P267 1494 aa25.1■■□□□ 1.61
USB1-204ENST00000561568 TSPY4P0CV99 314 aa25.1■■□□□ 1.61
USB1-204ENST00000561568 TSPY10P0CW01 314 aa25.1■■□□□ 1.61
USB1-204ENST00000561568 SYCP2Q9BX26 1530 aa25.1■■□□□ 1.61
USB1-204ENST00000561568 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
USB1-204ENST00000561568 FRMPD1Q5SYB0 1578 aa25.08■■□□□ 1.61
USB1-204ENST00000561568 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
USB1-204ENST00000561568 MLH3Q9UHC1 1453 aa25.06■■□□□ 1.6
USB1-204ENST00000561568 ZMYM4Q5VZL5 1548 aa25.06■■□□□ 1.6
USB1-204ENST00000561568 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
USB1-204ENST00000561568 TCOF1Q13428 1488 aaKnown RBP25.04■■□□□ 1.6
USB1-204ENST00000561568 KDM5CP41229 1560 aa25.04■■□□□ 1.6
USB1-204ENST00000561568 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
USB1-204ENST00000561568 ARHGEF5Q12774 1597 aa25.01■■□□□ 1.59
USB1-204ENST00000561568 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
USB1-204ENST00000561568 ZFYVE16Q7Z3T8 1539 aa24.98■■□□□ 1.59
USB1-204ENST00000561568 YEATS2Q9ULM3 1422 aa24.98■■□□□ 1.59
USB1-204ENST00000561568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.98■■□□□ 1.59
USB1-204ENST00000561568 ATP10AO60312 1499 aa24.97■■□□□ 1.59
USB1-204ENST00000561568 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
USB1-204ENST00000561568 ABCC5O15440 1437 aa24.94■■□□□ 1.58
USB1-204ENST00000561568 RRBP1Q9P2E9 1410 aaKnown RBP24.93■■□□□ 1.58
USB1-204ENST00000561568 ARID4BQ4LE39 1312 aaPredicted RBP24.92■■□□□ 1.58
USB1-204ENST00000561568 DAPK1P53355 1430 aa24.92■■□□□ 1.58
USB1-204ENST00000561568 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
USB1-204ENST00000561568 ARHGEF40Q8TER5 1519 aa24.91■■□□□ 1.58
USB1-204ENST00000561568 KIDINS220Q9ULH0 1771 aa24.9■■□□□ 1.58
USB1-204ENST00000561568 C9orf84Q5VXU9 1444 aa24.89■■□□□ 1.58
USB1-204ENST00000561568 DNMT1P26358 1616 aaKnown RBP24.87■■□□□ 1.57
USB1-204ENST00000561568 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
USB1-204ENST00000561568 INO80Q9ULG1 1556 aaPredicted RBP24.87■■□□□ 1.57
USB1-204ENST00000561568 DIP2CQ9Y2E4 1556 aa24.85■■□□□ 1.57
USB1-204ENST00000561568 MAST1Q9Y2H9 1570 aa24.85■■□□□ 1.57
USB1-204ENST00000561568 SHANK2Q9UPX8 1470 aa24.85■■□□□ 1.57
USB1-204ENST00000561568 ITGAEP38570 1179 aa24.85■■□□□ 1.57
USB1-204ENST00000561568 DHX29Q7Z478 1369 aaKnown RBP24.84■■□□□ 1.57
USB1-204ENST00000561568 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.57
USB1-204ENST00000561568 RRP7BPQ9NSQ0 103 aa24.83■■□□□ 1.57
USB1-204ENST00000561568 A2MP01023 1474 aa24.83■■□□□ 1.56
USB1-204ENST00000561568 ABCA6Q8N139 1617 aa24.83■■□□□ 1.56
USB1-204ENST00000561568 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
USB1-204ENST00000561568 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
USB1-204ENST00000561568 AGLP35573 1532 aa24.77■■□□□ 1.56
USB1-204ENST00000561568 ADGBQ8N7X0 1667 aa24.77■■□□□ 1.56
USB1-204ENST00000561568 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
USB1-204ENST00000561568 CROCC2H7BZ55 1655 aa24.76■■□□□ 1.55
USB1-204ENST00000561568 MLECQ14165 292 aa24.76■■□□□ 1.55
USB1-204ENST00000561568 KDM4FA0A1W2PPD8 638 aa24.75■■□□□ 1.55
USB1-204ENST00000561568 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
USB1-204ENST00000561568 KIF15Q9NS87 1388 aa24.75■■□□□ 1.55
USB1-204ENST00000561568 KIF3BO15066 747 aa24.74■■□□□ 1.55
USB1-204ENST00000561568 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
USB1-204ENST00000561568 PLXNC1O60486 1568 aa24.73■■□□□ 1.55
USB1-204ENST00000561568 PPP6R1Q9UPN7 881 aa24.73■■□□□ 1.55
USB1-204ENST00000561568 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
USB1-204ENST00000561568 GGT6Q6P531 493 aa24.71■■□□□ 1.55
USB1-204ENST00000561568 ESF1Q9H501 851 aaKnown RBP24.7■■□□□ 1.54
USB1-204ENST00000561568 SIGLEC1Q9BZZ2 1709 aa24.68■■□□□ 1.54
USB1-204ENST00000561568 BCORL1Q5H9F3 1711 aa24.66■■□□□ 1.54
USB1-204ENST00000561568 ERBINQ96RT1 1412 aa24.65■■□□□ 1.54
USB1-204ENST00000561568 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
USB1-204ENST00000561568 ADAMTSL3P82987 1691 aa24.61■■□□□ 1.53
USB1-204ENST00000561568 WASHC2CQ9Y4E1 1318 aa24.59■■□□□ 1.53
USB1-204ENST00000561568 EIF2AK4Q9P2K8 1649 aaKnown RBP24.58■■□□□ 1.53
USB1-204ENST00000561568 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
USB1-204ENST00000561568 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms