RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	SCAPER	Q9BY12	1400 aa		29.65	■■■□□ 2.34
DCAF11-238	ENST00000561375	PCF11	O94913	1555 aa	Known RBP	29.64	■■■□□ 2.34
DCAF11-238	ENST00000561375	POGZ	Q7Z3K3	1410 aa		29.64	■■■□□ 2.34
DCAF11-238	ENST00000561375	ILDR1	Q86SU0	546 aa	Predicted RBP	29.63	■■■□□ 2.33
DCAF11-238	ENST00000561375	CDK11A	Q9UQ88	783 aa	Predicted RBP	29.63	■■■□□ 2.33
DCAF11-238	ENST00000561375	TRO	Q12816	1431 aa	Predicted RBP	29.62	■■■□□ 2.33
DCAF11-238	ENST00000561375	CLIP1	P30622	1438 aa		29.59	■■■□□ 2.33
DCAF11-238	ENST00000561375	MAGI2	Q86UL8	1455 aa		29.59	■■■□□ 2.33
DCAF11-238	ENST00000561375	ARHGAP5	Q13017	1502 aa		29.58	■■■□□ 2.33
DCAF11-238	ENST00000561375	EFCAB2	Q5VUJ9	269 aa		29.56	■■■□□ 2.32
DCAF11-238	ENST00000561375	FER1L4	A9Z1Z3	1794 aa		29.54	■■■□□ 2.32
DCAF11-238	ENST00000561375	CDC42BPB	Q9Y5S2	1711 aa		29.54	■■■□□ 2.32
DCAF11-238	ENST00000561375	CASKIN1	Q8WXD9	1431 aa		29.53	■■■□□ 2.32
DCAF11-238	ENST00000561375	PLPPR3	Q6T4P5	718 aa		29.52	■■■□□ 2.32
DCAF11-238	ENST00000561375	CCDC18	Q5T9S5	1454 aa		29.51	■■■□□ 2.31
DCAF11-238	ENST00000561375	MLEC	Q14165	292 aa		29.51	■■■□□ 2.31
DCAF11-238	ENST00000561375	LMTK3	Q96Q04	1460 aa		29.49	■■■□□ 2.31
DCAF11-238	ENST00000561375	PREX2	Q70Z35	1606 aa		29.49	■■■□□ 2.31
DCAF11-238	ENST00000561375	ZNF518A	Q6AHZ1	1483 aa		29.48	■■■□□ 2.31
DCAF11-238	ENST00000561375	ATP10A	O60312	1499 aa		29.47	■■■□□ 2.31
DCAF11-238	ENST00000561375	KDM5C	P41229	1560 aa		29.46	■■■□□ 2.31
DCAF11-238	ENST00000561375	C9orf84	Q5VXU9	1444 aa		29.45	■■■□□ 2.31
DCAF11-238	ENST00000561375	FYCO1	Q9BQS8	1478 aa		29.44	■■■□□ 2.3
DCAF11-238	ENST00000561375	CDC42BPA	Q5VT25	1732 aa		29.42	■■■□□ 2.3
DCAF11-238	ENST00000561375	AFAP1	Q8N556	730 aa		29.41	■■■□□ 2.3
DCAF11-238	ENST00000561375	ITSN2	Q9NZM3	1697 aa		29.4	■■■□□ 2.3
DCAF11-238	ENST00000561375	ARHGEF12	Q9NZN5	1544 aa		29.4	■■■□□ 2.3
DCAF11-238	ENST00000561375	DIP2C	Q9Y2E4	1556 aa		29.39	■■■□□ 2.3
DCAF11-238	ENST00000561375	ABCC1	P33527	1531 aa		29.39	■■■□□ 2.3
DCAF11-238	ENST00000561375	MYT1L	Q9UL68	1186 aa		29.37	■■■□□ 2.29
DCAF11-238	ENST00000561375	ABCA6	Q8N139	1617 aa		29.37	■■■□□ 2.29
DCAF11-238	ENST00000561375	HSPA2	P54652	639 aa		29.33	■■■□□ 2.29
DCAF11-238	ENST00000561375	TRAPPC8	Q9Y2L5	1435 aa		29.33	■■■□□ 2.29
DCAF11-238	ENST00000561375	MLH3	Q9UHC1	1453 aa		29.29	■■■□□ 2.28
DCAF11-238	ENST00000561375	RERE	Q9P2R6	1566 aa		29.28	■■■□□ 2.28
DCAF11-238	ENST00000561375	SAMD9L	Q8IVG5	1584 aa		29.26	■■■□□ 2.28
DCAF11-238	ENST00000561375	KIDINS220	Q9ULH0	1771 aa		29.26	■■■□□ 2.28
DCAF11-238	ENST00000561375	PREX1	Q8TCU6	1659 aa		29.26	■■■□□ 2.27
DCAF11-238	ENST00000561375	CEBPA	P49715	358 aa	Predicted RBP	29.23	■■■□□ 2.27
DCAF11-238	ENST00000561375	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.23	■■■□□ 2.27
DCAF11-238	ENST00000561375	SYCP2	Q9BX26	1530 aa		29.23	■■■□□ 2.27
DCAF11-238	ENST00000561375	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.21	■■■□□ 2.27
DCAF11-238	ENST00000561375	AGL	P35573	1532 aa		29.17	■■■□□ 2.26
DCAF11-238	ENST00000561375	C3	P01024	1663 aa		29.17	■■■□□ 2.26
DCAF11-238	ENST00000561375	FBXO41	Q8TF61	875 aa		29.15	■■■□□ 2.26
DCAF11-238	ENST00000561375	MTUS2	Q5JR59	1369 aa		29.13	■■■□□ 2.25
DCAF11-238	ENST00000561375	CCNB3	Q8WWL7	1395 aa		29.12	■■■□□ 2.25
DCAF11-238	ENST00000561375	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.11	■■■□□ 2.25
DCAF11-238	ENST00000561375	SUPT6H	Q7KZ85	1726 aa	Known RBP	29.11	■■■□□ 2.25
DCAF11-238	ENST00000561375	CEP162	Q5TB80	1403 aa		29.11	■■■□□ 2.25
DCAF11-238	ENST00000561375	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.09	■■■□□ 2.25
DCAF11-238	ENST00000561375	TIAM1	Q13009	1591 aa		29.09	■■■□□ 2.25
DCAF11-238	ENST00000561375	ATP7A	Q04656	1500 aa		29.08	■■■□□ 2.25
DCAF11-238	ENST00000561375	EHBP1L1	Q8N3D4	1523 aa		29.08	■■■□□ 2.25
DCAF11-238	ENST00000561375	INO80	Q9ULG1	1556 aa	Predicted RBP	29.08	■■■□□ 2.25
DCAF11-238	ENST00000561375	SPAG9	O60271	1321 aa	Known RBP	29.07	■■■□□ 2.24
DCAF11-238	ENST00000561375	UHRF1BP1	Q6BDS2	1440 aa		29.07	■■■□□ 2.24
DCAF11-238	ENST00000561375	ESF1	Q9H501	851 aa	Known RBP	29.06	■■■□□ 2.24
DCAF11-238	ENST00000561375	SETD1B	Q9UPS6	1966 aa	Known RBP	29.06	■■■□□ 2.24
DCAF11-238	ENST00000561375	PLEKHH2	Q8IVE3	1493 aa		29.05	■■■□□ 2.24
DCAF11-238	ENST00000561375	STRC	Q7RTU9	1775 aa		29.04	■■■□□ 2.24
DCAF11-238	ENST00000561375	KIAA1107	Q9UPP5	1409 aa		29.03	■■■□□ 2.24
DCAF11-238	ENST00000561375	PLXNC1	O60486	1568 aa		28.99	■■■□□ 2.23
DCAF11-238	ENST00000561375	MROH2A	A6NES4	1674 aa		28.99	■■■□□ 2.23
DCAF11-238	ENST00000561375	CNTLN	Q9NXG0	1405 aa		28.98	■■■□□ 2.23
DCAF11-238	ENST00000561375	ZNF644	Q9H582	1327 aa	Predicted RBP	28.97	■■■□□ 2.23
DCAF11-238	ENST00000561375	CLTC	Q00610	1675 aa	Known RBP	28.96	■■■□□ 2.23
DCAF11-238	ENST00000561375	A2M	P01023	1474 aa		28.96	■■■□□ 2.23
DCAF11-238	ENST00000561375	ADGB	Q8N7X0	1667 aa		28.95	■■■□□ 2.22
DCAF11-238	ENST00000561375	CERK	Q8TCT0	537 aa		28.9	■■■□□ 2.22
DCAF11-238	ENST00000561375	MBD5	Q9P267	1494 aa		28.89	■■■□□ 2.22
DCAF11-238	ENST00000561375	NCOA2	Q15596	1464 aa		28.88	■■■□□ 2.21
DCAF11-238	ENST00000561375	ZMYM3	Q14202	1370 aa		28.86	■■■□□ 2.21
DCAF11-238	ENST00000561375	NPAT	Q14207	1427 aa		28.84	■■■□□ 2.21
DCAF11-238	ENST00000561375	CAMSAP2	Q08AD1	1489 aa		28.84	■■■□□ 2.21
DCAF11-238	ENST00000561375	GGT6	Q6P531	493 aa		28.83	■■■□□ 2.21
DCAF11-238	ENST00000561375	DMRT2	Q9Y5R5	561 aa		28.83	■■■□□ 2.21
DCAF11-238	ENST00000561375	LOC105371045	A0A1W2PR82	267 aa		28.82	■■■□□ 2.2
DCAF11-238	ENST00000561375	MYO3A	Q8NEV4	1616 aa		28.81	■■■□□ 2.2
DCAF11-238	ENST00000561375	CCDC141	Q6ZP82	1450 aa		28.79	■■■□□ 2.2
DCAF11-238	ENST00000561375	CAMSAP1	Q5T5Y3	1602 aa		28.79	■■■□□ 2.2
DCAF11-238	ENST00000561375	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.78	■■■□□ 2.2
DCAF11-238	ENST00000561375	NCOA1	Q15788	1441 aa		28.78	■■■□□ 2.2
DCAF11-238	ENST00000561375	VPS8	Q8N3P4	1428 aa		28.78	■■■□□ 2.2
DCAF11-238	ENST00000561375	ZNF142	P52746	1687 aa	Predicted RBP	28.78	■■■□□ 2.2
DCAF11-238	ENST00000561375	PTPRT	O14522	1441 aa		28.77	■■■□□ 2.2
DCAF11-238	ENST00000561375	PTPRK	Q15262	1439 aa		28.75	■■■□□ 2.19
DCAF11-238	ENST00000561375	LRRC9	Q6ZRR7	1453 aa		28.72	■■■□□ 2.19
DCAF11-238	ENST00000561375	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.72	■■■□□ 2.19
DCAF11-238	ENST00000561375	DHX29	Q7Z478	1369 aa	Known RBP	28.72	■■■□□ 2.19
DCAF11-238	ENST00000561375	ARHGEF5	Q12774	1597 aa		28.7	■■■□□ 2.18
DCAF11-238	ENST00000561375	LTBP4	Q8N2S1	1624 aa		28.66	■■■□□ 2.18
DCAF11-238	ENST00000561375	KIF3B	O15066	747 aa		28.65	■■■□□ 2.18
DCAF11-238	ENST00000561375	PPP6R1	Q9UPN7	881 aa		28.65	■■■□□ 2.18
DCAF11-238	ENST00000561375	NCKAP5L	Q9HCH0	1330 aa		28.65	■■■□□ 2.18
DCAF11-238	ENST00000561375	KDM5D	Q9BY66	1539 aa		28.64	■■■□□ 2.17
DCAF11-238	ENST00000561375	KANK4	Q5T7N3	995 aa	Predicted RBP	28.62	■■■□□ 2.17
DCAF11-238	ENST00000561375	RSPH4A	Q5TD94	716 aa		28.61	■■■□□ 2.17
DCAF11-238	ENST00000561375	PLA2R1	Q13018	1463 aa		28.6	■■■□□ 2.17
DCAF11-238	ENST00000561375	MAP3K1	Q13233	1512 aa		28.59	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms