RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 FARP1Q9Y4F1 1045 aaPredicted RBP9.66□□□□□ -0.86
HERC1-213ENST00000561359 PTPRMP28827 1452 aa9.65□□□□□ -0.87
HERC1-213ENST00000561359 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.87
HERC1-213ENST00000561359 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
HERC1-213ENST00000561359 UACAQ9BZF9 1416 aa9.63□□□□□ -0.87
HERC1-213ENST00000561359 UHRF1BP1LA0JNW5 1464 aa9.62□□□□□ -0.87
HERC1-213ENST00000561359 PLEKHG5O94827 1062 aa9.62□□□□□ -0.87
HERC1-213ENST00000561359 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
HERC1-213ENST00000561359 HSPA2P54652 639 aa9.61□□□□□ -0.87
HERC1-213ENST00000561359 CUL7Q14999 1698 aa9.61□□□□□ -0.87
HERC1-213ENST00000561359 MIER1Q8N108 512 aa9.6□□□□□ -0.87
HERC1-213ENST00000561359 KIF21BO75037 1637 aa9.6□□□□□ -0.87
HERC1-213ENST00000561359 CD109Q6YHK3 1445 aa9.59□□□□□ -0.87
HERC1-213ENST00000561359 SP7Q8TDD2 431 aaPredicted RBP9.59□□□□□ -0.87
HERC1-213ENST00000561359 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
HERC1-213ENST00000561359 BIVM-ERCC5R4GMW8 1640 aa9.59□□□□□ -0.87
HERC1-213ENST00000561359 ARID4BQ4LE39 1312 aaPredicted RBP9.58□□□□□ -0.88
HERC1-213ENST00000561359 KDM5BQ9UGL1 1544 aa9.58□□□□□ -0.88
HERC1-213ENST00000561359 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
HERC1-213ENST00000561359 SPATA31D1Q6ZQQ2 1576 aa9.58□□□□□ -0.88
HERC1-213ENST00000561359 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
HERC1-213ENST00000561359 FBXO3Q9UK99 471 aa9.57□□□□□ -0.88
HERC1-213ENST00000561359 IGF1RP08069 1367 aa9.57□□□□□ -0.88
HERC1-213ENST00000561359 WDR7Q9Y4E6 1490 aa9.56□□□□□ -0.88
HERC1-213ENST00000561359 CD44P16070 742 aaKnown RBP9.56□□□□□ -0.88
HERC1-213ENST00000561359 EVX2Q03828 476 aa9.56□□□□□ -0.88
HERC1-213ENST00000561359 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
HERC1-213ENST00000561359 ADAMTSL3P82987 1691 aa9.54□□□□□ -0.88
HERC1-213ENST00000561359 ZCCHC11Q5TAX3 1644 aaKnown RBP9.53□□□□□ -0.88
HERC1-213ENST00000561359 RAPGEF3O95398 923 aa9.51□□□□□ -0.89
HERC1-213ENST00000561359 CARMIL1Q5VZK9 1371 aa9.5□□□□□ -0.89
HERC1-213ENST00000561359 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
HERC1-213ENST00000561359 ARAP3Q8WWN8 1544 aa9.5□□□□□ -0.89
HERC1-213ENST00000561359 MADDQ8WXG6 1647 aa9.49□□□□□ -0.89
HERC1-213ENST00000561359 KIF27Q86VH2 1401 aa9.49□□□□□ -0.89
HERC1-213ENST00000561359 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
HERC1-213ENST00000561359 DISP1Q96F81 1524 aa9.49□□□□□ -0.89
HERC1-213ENST00000561359 IQGAP2Q13576 1575 aa9.49□□□□□ -0.89
HERC1-213ENST00000561359 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
HERC1-213ENST00000561359 CFAP43Q8NDM7 1665 aa9.48□□□□□ -0.89
HERC1-213ENST00000561359 BCORL1Q5H9F3 1711 aa9.47□□□□□ -0.89
HERC1-213ENST00000561359 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
HERC1-213ENST00000561359 SUPT5HO00267 1087 aaKnown RBP9.45□□□□□ -0.9
HERC1-213ENST00000561359 PHLDB1Q86UU1 1377 aa9.45□□□□□ -0.9
HERC1-213ENST00000561359 RIMS1Q86UR5 1692 aaKnown RBP9.44□□□□□ -0.9
HERC1-213ENST00000561359 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
HERC1-213ENST00000561359 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
HERC1-213ENST00000561359 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
HERC1-213ENST00000561359 MLECQ14165 292 aa9.42□□□□□ -0.9
HERC1-213ENST00000561359 POGZQ7Z3K3 1410 aa9.41□□□□□ -0.9
HERC1-213ENST00000561359 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
HERC1-213ENST00000561359 UGGT2Q9NYU1 1516 aa9.41□□□□□ -0.9
HERC1-213ENST00000561359 GABBR2O75899 941 aa9.4□□□□□ -0.9
HERC1-213ENST00000561359 KIAA0556O60303 1618 aa9.39□□□□□ -0.91
HERC1-213ENST00000561359 KLHL34Q8N239 644 aa9.39□□□□□ -0.91
HERC1-213ENST00000561359 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
HERC1-213ENST00000561359 NEO1Q92859 1461 aa9.37□□□□□ -0.91
HERC1-213ENST00000561359 FANCAO15360 1455 aa9.36□□□□□ -0.91
HERC1-213ENST00000561359 CLCN6P51797 869 aa9.36□□□□□ -0.91
HERC1-213ENST00000561359 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
HERC1-213ENST00000561359 AKNAQ7Z591 1439 aa9.36□□□□□ -0.91
HERC1-213ENST00000561359 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
HERC1-213ENST00000561359 UBAP1LF5GYI3 381 aa9.35□□□□□ -0.91
HERC1-213ENST00000561359 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
HERC1-213ENST00000561359 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
HERC1-213ENST00000561359 ABCA8O94911 1581 aa9.34□□□□□ -0.91
HERC1-213ENST00000561359 FRMPD1Q5SYB0 1578 aa9.34□□□□□ -0.91
HERC1-213ENST00000561359 DENND4BO75064 1496 aaPredicted RBP9.34□□□□□ -0.91
HERC1-213ENST00000561359 PTPRTO14522 1441 aa9.33□□□□□ -0.92
HERC1-213ENST00000561359 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
HERC1-213ENST00000561359 RAPGEF2Q9Y4G8 1499 aa9.33□□□□□ -0.92
HERC1-213ENST00000561359 UHRF1BP1Q6BDS2 1440 aa9.32□□□□□ -0.92
HERC1-213ENST00000561359 ATP10BO94823 1461 aa9.32□□□□□ -0.92
HERC1-213ENST00000561359 GOLGA3Q08378 1498 aa9.32□□□□□ -0.92
HERC1-213ENST00000561359 ABCA9Q8IUA7 1624 aa9.31□□□□□ -0.92
HERC1-213ENST00000561359 FAM212AQ96EL1 285 aa9.31□□□□□ -0.92
HERC1-213ENST00000561359 IQSEC2Q5JU85 1478 aa9.31□□□□□ -0.92
HERC1-213ENST00000561359 STRCQ7RTU9 1775 aa9.31□□□□□ -0.92
HERC1-213ENST00000561359 NUBP1P53384 320 aa9.3□□□□□ -0.92
HERC1-213ENST00000561359 LTBP4Q8N2S1 1624 aa9.3□□□□□ -0.92
HERC1-213ENST00000561359 FHOD3Q2V2M9 1422 aa9.3□□□□□ -0.92
HERC1-213ENST00000561359 PREX1Q8TCU6 1659 aa9.29□□□□□ -0.92
HERC1-213ENST00000561359 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
HERC1-213ENST00000561359 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
HERC1-213ENST00000561359 P3H3Q8IVL6 736 aa9.28□□□□□ -0.92
HERC1-213ENST00000561359 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
HERC1-213ENST00000561359 FER1L4A9Z1Z3 1794 aa9.27□□□□□ -0.92
HERC1-213ENST00000561359 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.93
HERC1-213ENST00000561359 HSPA1LP34931 641 aa9.27□□□□□ -0.93
HERC1-213ENST00000561359 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
HERC1-213ENST00000561359 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.93
HERC1-213ENST00000561359 EFCAB5A4FU69 1503 aa9.26□□□□□ -0.93
HERC1-213ENST00000561359 MED1Q15648 1581 aaPredicted RBP9.26□□□□□ -0.93
HERC1-213ENST00000561359 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
HERC1-213ENST00000561359 MAGI2Q86UL8 1455 aa9.25□□□□□ -0.93
HERC1-213ENST00000561359 ZNF335Q9H4Z2 1342 aaPredicted RBP9.25□□□□□ -0.93
HERC1-213ENST00000561359 ARHGEF12Q9NZN5 1544 aa9.25□□□□□ -0.93
HERC1-213ENST00000561359 PIP4K2BP78356 416 aa9.24□□□□□ -0.93
HERC1-213ENST00000561359 RICTORQ6R327 1708 aa9.24□□□□□ -0.93
HERC1-213ENST00000561359 SIGLEC1Q9BZZ2 1709 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms