RNA–Protein interactions for RNA: ENST00000561248.1

COPS2-208, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-208ENST00000561248 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
COPS2-208ENST00000561248 PDE4AP27815 886 aa11.96□□□□□ -0.49
COPS2-208ENST00000561248 NCKAP5LQ9HCH0 1330 aa11.95□□□□□ -0.5
COPS2-208ENST00000561248 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
COPS2-208ENST00000561248 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
COPS2-208ENST00000561248 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
COPS2-208ENST00000561248 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
COPS2-208ENST00000561248 TMEM92Q6UXU6 159 aa11.93□□□□□ -0.5
COPS2-208ENST00000561248 KIF3CO14782 793 aa11.92□□□□□ -0.5
COPS2-208ENST00000561248 C2orf72A6NCS6 295 aa11.9□□□□□ -0.5
COPS2-208ENST00000561248 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
COPS2-208ENST00000561248 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
COPS2-208ENST00000561248 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
COPS2-208ENST00000561248 MFSD10Q14728 455 aa11.88□□□□□ -0.51
COPS2-208ENST00000561248 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
COPS2-208ENST00000561248 WDR70Q9NW82 654 aa11.87□□□□□ -0.51
COPS2-208ENST00000561248 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
COPS2-208ENST00000561248 FOXK1P85037 733 aa11.86□□□□□ -0.51
COPS2-208ENST00000561248 DSG2Q14126 1118 aa11.84□□□□□ -0.51
COPS2-208ENST00000561248 PPP1R15BQ5SWA1 713 aa11.84□□□□□ -0.51
COPS2-208ENST00000561248 PLPP6Q8IY26 295 aa11.81□□□□□ -0.52
COPS2-208ENST00000561248 E2F4Q16254 413 aa11.76□□□□□ -0.53
COPS2-208ENST00000561248 CAMK2BQ13554 666 aa11.74□□□□□ -0.53
COPS2-208ENST00000561248 SNPHO15079 494 aa11.73□□□□□ -0.53
COPS2-208ENST00000561248 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
COPS2-208ENST00000561248 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
COPS2-208ENST00000561248 SLC34A2O95436 690 aa11.71□□□□□ -0.53
COPS2-208ENST00000561248 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
COPS2-208ENST00000561248 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
COPS2-208ENST00000561248 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
COPS2-208ENST00000561248 PTCD2Q8WV60 388 aaKnown RBP11.67□□□□□ -0.54
COPS2-208ENST00000561248 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
COPS2-208ENST00000561248 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
COPS2-208ENST00000561248 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
COPS2-208ENST00000561248 ZSWIM6Q9HCJ5 1215 aa11.65□□□□□ -0.54
COPS2-208ENST00000561248 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
COPS2-208ENST00000561248 TBC1D12O60347 775 aa11.64□□□□□ -0.55
COPS2-208ENST00000561248 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
COPS2-208ENST00000561248 UPF1Q92900 1129 aaKnown RBP eCLIP11.63□□□□□ -0.55
COPS2-208ENST00000561248 PCDHGA4Q9Y5G9 962 aa11.62□□□□□ -0.55
COPS2-208ENST00000561248 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
COPS2-208ENST00000561248 DPYSL4O14531 572 aa11.6□□□□□ -0.55
COPS2-208ENST00000561248 GPR153Q6NV75 609 aa11.57□□□□□ -0.56
COPS2-208ENST00000561248 ARSIQ5FYB1 569 aa11.56□□□□□ -0.56
COPS2-208ENST00000561248 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
COPS2-208ENST00000561248 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
COPS2-208ENST00000561248 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
COPS2-208ENST00000561248 PDIA6Q15084 440 aa11.55□□□□□ -0.56
COPS2-208ENST00000561248 ST18O60284 1047 aa11.53□□□□□ -0.56
COPS2-208ENST00000561248 EVI5O60447 810 aa11.53□□□□□ -0.56
COPS2-208ENST00000561248 FAM163AQ96GL9 167 aaPredicted RBP11.53□□□□□ -0.56
COPS2-208ENST00000561248 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
COPS2-208ENST00000561248 NUDT7P0C024 238 aa11.51□□□□□ -0.57
COPS2-208ENST00000561248 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.571e-7■■■□□ 19
COPS2-208ENST00000561248 NBR1Q14596 966 aa11.49□□□□□ -0.57
COPS2-208ENST00000561248 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
COPS2-208ENST00000561248 PTGER2P43116 358 aa11.45□□□□□ -0.58
COPS2-208ENST00000561248 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
COPS2-208ENST00000561248 SEMA3EO15041 775 aa11.44□□□□□ -0.58
COPS2-208ENST00000561248 BCANQ96GW7 911 aa11.44□□□□□ -0.58
COPS2-208ENST00000561248 EMP3P54852 163 aa11.43□□□□□ -0.58
COPS2-208ENST00000561248 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
COPS2-208ENST00000561248 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
COPS2-208ENST00000561248 MARVELD3Q96A59 401 aa11.41□□□□□ -0.58
COPS2-208ENST00000561248 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
COPS2-208ENST00000561248 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
COPS2-208ENST00000561248 DDX12PQ92771 950 aa11.39□□□□□ -0.59
COPS2-208ENST00000561248 ERBB3P21860 1342 aa11.38□□□□□ -0.59
COPS2-208ENST00000561248 PHF14O94880 888 aa11.38□□□□□ -0.59
COPS2-208ENST00000561248 SMYD5Q6GMV2 418 aa11.38□□□□□ -0.59
COPS2-208ENST00000561248 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
COPS2-208ENST00000561248 MLLT3P42568 568 aaPredicted RBP11.37□□□□□ -0.59
COPS2-208ENST00000561248 FOSBP53539 338 aa11.37□□□□□ -0.59
COPS2-208ENST00000561248 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
COPS2-208ENST00000561248 EPAS1Q99814 870 aa11.36□□□□□ -0.59
COPS2-208ENST00000561248 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
COPS2-208ENST00000561248 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
COPS2-208ENST00000561248 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
COPS2-208ENST00000561248 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
COPS2-208ENST00000561248 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
COPS2-208ENST00000561248 FBXW7Q969H0 707 aa11.34□□□□□ -0.59
COPS2-208ENST00000561248 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
COPS2-208ENST00000561248 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
COPS2-208ENST00000561248 OSBPP22059 807 aa11.31□□□□□ -0.6
COPS2-208ENST00000561248 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
COPS2-208ENST00000561248 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
COPS2-208ENST00000561248 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
COPS2-208ENST00000561248 ZNF687Q8N1G0 1237 aa11.26□□□□□ -0.61
COPS2-208ENST00000561248 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
COPS2-208ENST00000561248 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
COPS2-208ENST00000561248 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
COPS2-208ENST00000561248 POTEMA6NI47 508 aa11.25□□□□□ -0.61
COPS2-208ENST00000561248 MAP3K7O43318 606 aa11.25□□□□□ -0.61
COPS2-208ENST00000561248 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
COPS2-208ENST00000561248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.25□□□□□ -0.61
COPS2-208ENST00000561248 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
COPS2-208ENST00000561248 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
COPS2-208ENST00000561248 PBX2P40425 430 aa11.23□□□□□ -0.61
COPS2-208ENST00000561248 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
COPS2-208ENST00000561248 PTPREP23469 700 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms