RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 PTMSP20962 102 aa16.06■□□□□ 0.16
SYNM-203ENST00000560674 GBP4Q96PP9 640 aa16.06■□□□□ 0.16
SYNM-203ENST00000560674 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
SYNM-203ENST00000560674 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
SYNM-203ENST00000560674 RCAN3Q9UKA8 241 aa16.05■□□□□ 0.16
SYNM-203ENST00000560674 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
SYNM-203ENST00000560674 NPHP1O15259 732 aa16.04■□□□□ 0.16
SYNM-203ENST00000560674 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
SYNM-203ENST00000560674 ARHGAP35Q9NRY4 1499 aa16.02■□□□□ 0.15
SYNM-203ENST00000560674 RWDD1Q9H446 243 aaPredicted RBP16.01■□□□□ 0.15
SYNM-203ENST00000560674 RALBP1Q15311 655 aa16■□□□□ 0.15
SYNM-203ENST00000560674 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
SYNM-203ENST00000560674 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
SYNM-203ENST00000560674 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
SYNM-203ENST00000560674 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
SYNM-203ENST00000560674 KIAA1211Q6ZU35 1233 aa15.99■□□□□ 0.15
SYNM-203ENST00000560674 SLKQ9H2G2 1235 aaPredicted RBP15.99■□□□□ 0.15
SYNM-203ENST00000560674 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
SYNM-203ENST00000560674 KIAA2012Q0VF49 1180 aa15.98■□□□□ 0.15
SYNM-203ENST00000560674 SOX12O15370 315 aa15.98■□□□□ 0.15
SYNM-203ENST00000560674 APBB1O00213 710 aa15.98■□□□□ 0.15
SYNM-203ENST00000560674 PKD2Q13563 968 aa15.98■□□□□ 0.15
SYNM-203ENST00000560674 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
SYNM-203ENST00000560674 SOGA1O94964 1423 aa15.97■□□□□ 0.15
SYNM-203ENST00000560674 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
SYNM-203ENST00000560674 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
SYNM-203ENST00000560674 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.15
SYNM-203ENST00000560674 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
SYNM-203ENST00000560674 GNL2Q13823 731 aaKnown RBP15.96■□□□□ 0.14
SYNM-203ENST00000560674 CUX2O14529 1486 aa15.95■□□□□ 0.14
SYNM-203ENST00000560674 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
SYNM-203ENST00000560674 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
SYNM-203ENST00000560674 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
SYNM-203ENST00000560674 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
SYNM-203ENST00000560674 SYAP1Q96A49 352 aaPredicted RBP15.94■□□□□ 0.14
SYNM-203ENST00000560674 IPO9Q96P70 1041 aaKnown RBP15.94■□□□□ 0.14
SYNM-203ENST00000560674 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
SYNM-203ENST00000560674 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
SYNM-203ENST00000560674 FOXD1Q16676 465 aa15.93■□□□□ 0.14
SYNM-203ENST00000560674 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
SYNM-203ENST00000560674 GOLGA6L3A6NEY3 463 aa15.92■□□□□ 0.14
SYNM-203ENST00000560674 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
SYNM-203ENST00000560674 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
SYNM-203ENST00000560674 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
SYNM-203ENST00000560674 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
SYNM-203ENST00000560674 STK26Q9P289 416 aa15.89■□□□□ 0.13
SYNM-203ENST00000560674 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
SYNM-203ENST00000560674 CLSTN1O94985 981 aa15.86■□□□□ 0.13
SYNM-203ENST00000560674 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
SYNM-203ENST00000560674 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
SYNM-203ENST00000560674 ARID3AQ99856 593 aa15.85■□□□□ 0.13
SYNM-203ENST00000560674 EIF3AQ14152 1382 aaKnown RBP15.85■□□□□ 0.13
SYNM-203ENST00000560674 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
SYNM-203ENST00000560674 TPM4P67936 248 aa15.84■□□□□ 0.13
SYNM-203ENST00000560674 NUP155O75694 1391 aa15.84■□□□□ 0.13
SYNM-203ENST00000560674 ISY1Q9ULR0 285 aaKnown RBP15.84■□□□□ 0.13
SYNM-203ENST00000560674 MLECQ14165 292 aa15.84■□□□□ 0.13
SYNM-203ENST00000560674 GGT6Q6P531 493 aa15.84■□□□□ 0.13
SYNM-203ENST00000560674 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
SYNM-203ENST00000560674 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
SYNM-203ENST00000560674 STK31Q9BXU1 1019 aa15.83■□□□□ 0.12
SYNM-203ENST00000560674 HMMRO75330 724 aa15.83■□□□□ 0.12
SYNM-203ENST00000560674 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
SYNM-203ENST00000560674 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
SYNM-203ENST00000560674 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
SYNM-203ENST00000560674 ANKRD30AQ9BXX3 1397 aa15.82■□□□□ 0.12
SYNM-203ENST00000560674 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
SYNM-203ENST00000560674 CSPP1Q1MSJ5 1256 aa15.82■□□□□ 0.12
SYNM-203ENST00000560674 CENPJQ9HC77 1338 aaPredicted RBP15.82■□□□□ 0.12
SYNM-203ENST00000560674 GPATCH3Q96I76 525 aa15.81■□□□□ 0.12
SYNM-203ENST00000560674 SPAG9O60271 1321 aaKnown RBP15.81■□□□□ 0.12
SYNM-203ENST00000560674 TRIM6-TRIM34B2RNG4 842 aa15.81■□□□□ 0.12
SYNM-203ENST00000560674 WIZO95785 1651 aa15.8■□□□□ 0.12
SYNM-203ENST00000560674 CLUAP1Q96AJ1 413 aa15.79■□□□□ 0.12
SYNM-203ENST00000560674 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
SYNM-203ENST00000560674 HSP90B1P14625 803 aaKnown RBP15.78■□□□□ 0.12
SYNM-203ENST00000560674 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
SYNM-203ENST00000560674 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
SYNM-203ENST00000560674 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
SYNM-203ENST00000560674 HDAC5Q9UQL6 1122 aa15.78■□□□□ 0.12
SYNM-203ENST00000560674 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.12
SYNM-203ENST00000560674 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
SYNM-203ENST00000560674 NOC3LQ8WTT2 800 aaKnown RBP15.77■□□□□ 0.12
SYNM-203ENST00000560674 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.11
SYNM-203ENST00000560674 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.11
SYNM-203ENST00000560674 PHF14O94880 888 aa15.76■□□□□ 0.11
SYNM-203ENST00000560674 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
SYNM-203ENST00000560674 ST18O60284 1047 aa15.76■□□□□ 0.11
SYNM-203ENST00000560674 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
SYNM-203ENST00000560674 DDX11L8A8MPP1 907 aa15.75■□□□□ 0.11
SYNM-203ENST00000560674 GORABQ5T7V8 394 aa15.75■□□□□ 0.11
SYNM-203ENST00000560674 TERF2IPQ9NYB0 399 aa15.75■□□□□ 0.11
SYNM-203ENST00000560674 NOL8Q76FK4 1167 aaKnown RBP15.74■□□□□ 0.11
SYNM-203ENST00000560674 TNNT3P45378 269 aaPredicted RBP15.74■□□□□ 0.11
SYNM-203ENST00000560674 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
SYNM-203ENST00000560674 KIF15Q9NS87 1388 aa15.74■□□□□ 0.11
SYNM-203ENST00000560674 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
SYNM-203ENST00000560674 CSB-PGBD3P0DP91 1061 aa15.73■□□□□ 0.11
SYNM-203ENST00000560674 SLC4A10Q6U841 1118 aa15.73■□□□□ 0.11
SYNM-203ENST00000560674 GOLGA6L1Q8N7Z2 621 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms