RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 POGZQ7Z3K3 1410 aa32■■■□□ 2.71
RMDN3-208ENST00000560460 RIMS1Q86UR5 1692 aaKnown RBP32■■■□□ 2.71
RMDN3-208ENST00000560460 MAGI2Q86UL8 1455 aa31.99■■■□□ 2.71
RMDN3-208ENST00000560460 LRRIQ1Q96JM4 1722 aa31.98■■■□□ 2.71
RMDN3-208ENST00000560460 EFCAB2Q5VUJ9 269 aa31.98■■■□□ 2.71
RMDN3-208ENST00000560460 TROQ12816 1431 aaPredicted RBP31.98■■■□□ 2.71
RMDN3-208ENST00000560460 CLIP1P30622 1438 aa31.96■■■□□ 2.71
RMDN3-208ENST00000560460 SIGLEC1Q9BZZ2 1709 aa31.95■■■□□ 2.71
RMDN3-208ENST00000560460 ARHGAP5Q13017 1502 aa31.91■■■□□ 2.7
RMDN3-208ENST00000560460 PCF11O94913 1555 aaKnown RBP31.9■■■□□ 2.7
RMDN3-208ENST00000560460 MLECQ14165 292 aa31.89■■■□□ 2.7
RMDN3-208ENST00000560460 PLPPR3Q6T4P5 718 aa31.89■■■□□ 2.7
RMDN3-208ENST00000560460 CASKIN1Q8WXD9 1431 aa31.86■■■□□ 2.69
RMDN3-208ENST00000560460 CCDC18Q5T9S5 1454 aa31.84■■■□□ 2.69
RMDN3-208ENST00000560460 LMTK3Q96Q04 1460 aa31.84■■■□□ 2.69
RMDN3-208ENST00000560460 ATP10AO60312 1499 aa31.84■■■□□ 2.69
RMDN3-208ENST00000560460 FER1L4A9Z1Z3 1794 aa31.83■■■□□ 2.69
RMDN3-208ENST00000560460 ZNF518AQ6AHZ1 1483 aa31.83■■■□□ 2.69
RMDN3-208ENST00000560460 C9orf84Q5VXU9 1444 aa31.82■■■□□ 2.68
RMDN3-208ENST00000560460 CDC42BPBQ9Y5S2 1711 aa31.8■■■□□ 2.68
RMDN3-208ENST00000560460 AFAP1Q8N556 730 aa31.78■■■□□ 2.68
RMDN3-208ENST00000560460 MYT1LQ9UL68 1186 aa31.78■■■□□ 2.68
RMDN3-208ENST00000560460 KDM5CP41229 1560 aa31.77■■■□□ 2.68
RMDN3-208ENST00000560460 PREX2Q70Z35 1606 aa31.76■■■□□ 2.67
RMDN3-208ENST00000560460 FYCO1Q9BQS8 1478 aa31.75■■■□□ 2.67
RMDN3-208ENST00000560460 ARHGEF12Q9NZN5 1544 aa31.72■■■□□ 2.67
RMDN3-208ENST00000560460 HSPA2P54652 639 aa31.7■■■□□ 2.67
RMDN3-208ENST00000560460 ABCC1P33527 1531 aa31.68■■■□□ 2.66
RMDN3-208ENST00000560460 DIP2CQ9Y2E4 1556 aa31.68■■■□□ 2.66
RMDN3-208ENST00000560460 CDC42BPAQ5VT25 1732 aa31.66■■■□□ 2.66
RMDN3-208ENST00000560460 ITSN2Q9NZM3 1697 aa31.65■■■□□ 2.66
RMDN3-208ENST00000560460 TRAPPC8Q9Y2L5 1435 aa31.65■■■□□ 2.66
RMDN3-208ENST00000560460 ABCA6Q8N139 1617 aa31.64■■■□□ 2.65
RMDN3-208ENST00000560460 MLH3Q9UHC1 1453 aa31.63■■■□□ 2.65
RMDN3-208ENST00000560460 FBXO41Q8TF61 875 aa31.6■■■□□ 2.65
RMDN3-208ENST00000560460 REREQ9P2R6 1566 aa31.6■■■□□ 2.65
RMDN3-208ENST00000560460 CEBPAP49715 358 aaPredicted RBP31.58■■■□□ 2.65
RMDN3-208ENST00000560460 ZNF777Q9ULD5 760 aaPredicted RBP31.58■■■□□ 2.65
RMDN3-208ENST00000560460 PREX1Q8TCU6 1659 aa31.55■■■□□ 2.64
RMDN3-208ENST00000560460 KIDINS220Q9ULH0 1771 aa31.53■■■□□ 2.64
RMDN3-208ENST00000560460 SAMD9LQ8IVG5 1584 aa31.52■■■□□ 2.64
RMDN3-208ENST00000560460 GPATCH8Q9UKJ3 1502 aaKnown RBP31.51■■■□□ 2.63
RMDN3-208ENST00000560460 SYCP2Q9BX26 1530 aa31.5■■■□□ 2.63
RMDN3-208ENST00000560460 AGLP35573 1532 aa31.49■■■□□ 2.63
RMDN3-208ENST00000560460 ESF1Q9H501 851 aaKnown RBP31.47■■■□□ 2.63
RMDN3-208ENST00000560460 MTUS2Q5JR59 1369 aa31.46■■■□□ 2.63
RMDN3-208ENST00000560460 CCNB3Q8WWL7 1395 aa31.44■■■□□ 2.62
RMDN3-208ENST00000560460 HNRNPMP52272 730 aaKnown RBP eCLIP31.44■■■□□ 2.628e-6■■■■□ 19.5
RMDN3-208ENST00000560460 CFDP1Q9UEE9 299 aaPredicted RBP31.44■■■□□ 2.62
RMDN3-208ENST00000560460 C3P01024 1663 aa31.44■■■□□ 2.62
RMDN3-208ENST00000560460 UHRF1BP1Q6BDS2 1440 aa31.43■■■□□ 2.62
RMDN3-208ENST00000560460 SETD1BQ9UPS6 1966 aaKnown RBP31.43■■■□□ 2.62
RMDN3-208ENST00000560460 SPAG9O60271 1321 aaKnown RBP31.42■■■□□ 2.62
RMDN3-208ENST00000560460 PLEKHH2Q8IVE3 1493 aa31.39■■■□□ 2.62
RMDN3-208ENST00000560460 KIAA1107Q9UPP5 1409 aa31.37■■■□□ 2.61
RMDN3-208ENST00000560460 CEP162Q5TB80 1403 aa31.36■■■□□ 2.61
RMDN3-208ENST00000560460 ATP7AQ04656 1500 aa31.35■■■□□ 2.61
RMDN3-208ENST00000560460 SUPT6HQ7KZ85 1726 aaKnown RBP31.35■■■□□ 2.61
RMDN3-208ENST00000560460 CNTLNQ9NXG0 1405 aa31.34■■■□□ 2.61
RMDN3-208ENST00000560460 EHBP1L1Q8N3D4 1523 aa31.34■■■□□ 2.61
RMDN3-208ENST00000560460 INO80Q9ULG1 1556 aaPredicted RBP31.32■■■□□ 2.6
RMDN3-208ENST00000560460 TIAM1Q13009 1591 aa31.31■■■□□ 2.6
RMDN3-208ENST00000560460 STRCQ7RTU9 1775 aa31.31■■■□□ 2.6
RMDN3-208ENST00000560460 CERKQ8TCT0 537 aa31.29■■■□□ 2.6
RMDN3-208ENST00000560460 DMRT2Q9Y5R5 561 aa31.27■■■□□ 2.6
RMDN3-208ENST00000560460 ZNF644Q9H582 1327 aaPredicted RBP31.26■■■□□ 2.6
RMDN3-208ENST00000560460 A2MP01023 1474 aa31.26■■■□□ 2.59
RMDN3-208ENST00000560460 MROH2AA6NES4 1674 aa31.25■■■□□ 2.59
RMDN3-208ENST00000560460 PLXNC1O60486 1568 aa31.25■■■□□ 2.59
RMDN3-208ENST00000560460 ZMYM3Q14202 1370 aa31.2■■■□□ 2.59
RMDN3-208ENST00000560460 CLTCQ00610 1675 aaKnown RBP31.2■■■□□ 2.59
RMDN3-208ENST00000560460 ADGBQ8N7X0 1667 aa31.19■■■□□ 2.58
RMDN3-208ENST00000560460 NPATQ14207 1427 aa31.17■■■□□ 2.58
RMDN3-208ENST00000560460 MBD5Q9P267 1494 aa31.17■■■□□ 2.58
RMDN3-208ENST00000560460 GGT6Q6P531 493 aa31.17■■■□□ 2.58
RMDN3-208ENST00000560460 NCOA2Q15596 1464 aa31.14■■■□□ 2.57
RMDN3-208ENST00000560460 PTPRTO14522 1441 aa31.13■■■□□ 2.57
RMDN3-208ENST00000560460 NCOA1Q15788 1441 aa31.1■■■□□ 2.57
RMDN3-208ENST00000560460 RTEL1-TNFRSF6BF6WH68 1400 aa31.09■■■□□ 2.57
RMDN3-208ENST00000560460 CAMSAP2Q08AD1 1489 aa31.08■■■□□ 2.57
RMDN3-208ENST00000560460 CAMSAP1Q5T5Y3 1602 aa31.08■■■□□ 2.57
RMDN3-208ENST00000560460 CCDC141Q6ZP82 1450 aa31.07■■■□□ 2.56
RMDN3-208ENST00000560460 MYO3AQ8NEV4 1616 aa31.06■■■□□ 2.56
RMDN3-208ENST00000560460 LOC105371045A0A1W2PR82 267 aa31.05■■■□□ 2.56
RMDN3-208ENST00000560460 PTPRKQ15262 1439 aa31.04■■■□□ 2.56
RMDN3-208ENST00000560460 PPP6R1Q9UPN7 881 aa31.03■■■□□ 2.56
RMDN3-208ENST00000560460 DHX29Q7Z478 1369 aaKnown RBP31.03■■■□□ 2.56
RMDN3-208ENST00000560460 VPS8Q8N3P4 1428 aa31.02■■■□□ 2.56
RMDN3-208ENST00000560460 ZNF142P52746 1687 aaPredicted RBP31.01■■■□□ 2.55
RMDN3-208ENST00000560460 CEP170BQ9Y4F5 1589 aaPredicted RBP30.99■■■□□ 2.55
RMDN3-208ENST00000560460 RSPH4AQ5TD94 716 aa30.98■■■□□ 2.55
RMDN3-208ENST00000560460 LRRC9Q6ZRR7 1453 aa30.97■■■□□ 2.55
RMDN3-208ENST00000560460 KIF3BO15066 747 aa30.97■■■□□ 2.55
RMDN3-208ENST00000560460 NCKAP5LQ9HCH0 1330 aa30.97■■■□□ 2.55
RMDN3-208ENST00000560460 LTBP4Q8N2S1 1624 aa30.95■■■□□ 2.54
RMDN3-208ENST00000560460 ARHGEF5Q12774 1597 aa30.94■■■□□ 2.54
RMDN3-208ENST00000560460 TSPY4P0CV99 314 aa30.91■■■□□ 2.54
RMDN3-208ENST00000560460 TSPY10P0CW01 314 aa30.91■■■□□ 2.54
RMDN3-208ENST00000560460 PLA2R1Q13018 1463 aa30.9■■■□□ 2.54
RMDN3-208ENST00000560460 KDM5DQ9BY66 1539 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms