RNA–Protein interactions for RNA: ENST00000559995.1

INO80-206, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-206ENST00000559995 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
INO80-206ENST00000559995 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
INO80-206ENST00000559995 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
INO80-206ENST00000559995 KIF3CO14782 793 aa12.25□□□□□ -0.45
INO80-206ENST00000559995 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
INO80-206ENST00000559995 ZNF710Q8N1W2 664 aa12.23□□□□□ -0.45
INO80-206ENST00000559995 ST18O60284 1047 aa12.22□□□□□ -0.45
INO80-206ENST00000559995 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
INO80-206ENST00000559995 RIMBP2O15034 1052 aa12.21□□□□□ -0.45
INO80-206ENST00000559995 HOXB3P14651 431 aaPredicted RBP12.2□□□□□ -0.46
INO80-206ENST00000559995 PDE4AP27815 886 aa12.2□□□□□ -0.46
INO80-206ENST00000559995 LCE2DQ5TA82 110 aaPredicted RBP12.17□□□□□ -0.46
INO80-206ENST00000559995 FOXK1P85037 733 aa12.16□□□□□ -0.46
INO80-206ENST00000559995 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
INO80-206ENST00000559995 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
INO80-206ENST00000559995 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
INO80-206ENST00000559995 POTEMA6NI47 508 aa12.13□□□□□ -0.47
INO80-206ENST00000559995 DSG2Q14126 1118 aa12.13□□□□□ -0.47
INO80-206ENST00000559995 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
INO80-206ENST00000559995 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
INO80-206ENST00000559995 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
INO80-206ENST00000559995 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
INO80-206ENST00000559995 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
INO80-206ENST00000559995 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
INO80-206ENST00000559995 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
INO80-206ENST00000559995 SLC34A2O95436 690 aa12.08□□□□□ -0.48
INO80-206ENST00000559995 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
INO80-206ENST00000559995 EMP3P54852 163 aa12.08□□□□□ -0.48
INO80-206ENST00000559995 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
INO80-206ENST00000559995 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
INO80-206ENST00000559995 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
INO80-206ENST00000559995 MFSD10Q14728 455 aa12.04□□□□□ -0.48
INO80-206ENST00000559995 PCDHGA4Q9Y5G9 962 aa12.03□□□□□ -0.48
INO80-206ENST00000559995 TBC1D12O60347 775 aa12.02□□□□□ -0.49
INO80-206ENST00000559995 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
INO80-206ENST00000559995 FAM205CA6NFA0 338 aa12□□□□□ -0.49
INO80-206ENST00000559995 KHSRPQ92945 711 aaKnown RBP eCLIP12□□□□□ -0.49
INO80-206ENST00000559995 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
INO80-206ENST00000559995 ERBB3P21860 1342 aa11.99□□□□□ -0.49
INO80-206ENST00000559995 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
INO80-206ENST00000559995 WDR70Q9NW82 654 aa11.98□□□□□ -0.49
INO80-206ENST00000559995 NUDT7P0C024 238 aa11.97□□□□□ -0.49
INO80-206ENST00000559995 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
INO80-206ENST00000559995 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
INO80-206ENST00000559995 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
INO80-206ENST00000559995 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
INO80-206ENST00000559995 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
INO80-206ENST00000559995 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
INO80-206ENST00000559995 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
INO80-206ENST00000559995 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
INO80-206ENST00000559995 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
INO80-206ENST00000559995 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
INO80-206ENST00000559995 CAMK2BQ13554 666 aa11.88□□□□□ -0.51
INO80-206ENST00000559995 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
INO80-206ENST00000559995 E2F4Q16254 413 aa11.87□□□□□ -0.51
INO80-206ENST00000559995 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
INO80-206ENST00000559995 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
INO80-206ENST00000559995 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
INO80-206ENST00000559995 EVI5O60447 810 aa11.84□□□□□ -0.51
INO80-206ENST00000559995 DPYSL4O14531 572 aa11.82□□□□□ -0.52
INO80-206ENST00000559995 ZNF687Q8N1G0 1237 aa11.82□□□□□ -0.52
INO80-206ENST00000559995 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
INO80-206ENST00000559995 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
INO80-206ENST00000559995 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
INO80-206ENST00000559995 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
INO80-206ENST00000559995 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
INO80-206ENST00000559995 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
INO80-206ENST00000559995 SPDYE16A6NNV3 312 aaPredicted RBP11.72□□□□□ -0.53
INO80-206ENST00000559995 PBX2P40425 430 aa11.72□□□□□ -0.53
INO80-206ENST00000559995 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
INO80-206ENST00000559995 FOSBP53539 338 aa11.71□□□□□ -0.53
INO80-206ENST00000559995 PDIA6Q15084 440 aa11.7□□□□□ -0.54
INO80-206ENST00000559995 P3H3Q8IVL6 736 aa11.7□□□□□ -0.54
INO80-206ENST00000559995 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
INO80-206ENST00000559995 ARHGAP33O14559 1287 aa11.68□□□□□ -0.54
INO80-206ENST00000559995 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
INO80-206ENST00000559995 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
INO80-206ENST00000559995 AXIN2Q9Y2T1 843 aa11.68□□□□□ -0.54
INO80-206ENST00000559995 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
INO80-206ENST00000559995 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
INO80-206ENST00000559995 PHF14O94880 888 aa11.66□□□□□ -0.54
INO80-206ENST00000559995 PTGER2P43116 358 aa11.65□□□□□ -0.54
INO80-206ENST00000559995 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
INO80-206ENST00000559995 DDX12PQ92771 950 aa11.65□□□□□ -0.54
INO80-206ENST00000559995 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.54
INO80-206ENST00000559995 PCDHGA10Q9Y5H3 936 aa11.65□□□□□ -0.54
INO80-206ENST00000559995 LSM11P83369 360 aaKnown RBP eCLIP11.64□□□□□ -0.55
INO80-206ENST00000559995 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
INO80-206ENST00000559995 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
INO80-206ENST00000559995 EPAS1Q99814 870 aa11.64□□□□□ -0.55
INO80-206ENST00000559995 KDM2AQ9Y2K7 1162 aa11.64□□□□□ -0.55
INO80-206ENST00000559995 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
INO80-206ENST00000559995 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
INO80-206ENST00000559995 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
INO80-206ENST00000559995 PTPREP23469 700 aa11.62□□□□□ -0.55
INO80-206ENST00000559995 PSEN2P49810 448 aa11.62□□□□□ -0.55
INO80-206ENST00000559995 ADAM33Q9BZ11 813 aa11.61□□□□□ -0.55
INO80-206ENST00000559995 SPNS2Q8IVW8 549 aa11.6□□□□□ -0.55
INO80-206ENST00000559995 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
INO80-206ENST00000559995 NBR1Q14596 966 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms