RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.57□□□□□ -1.2
GABPB1-207ENST00000558335 TSHZ2Q9NRE2 1034 aa7.57□□□□□ -1.2
GABPB1-207ENST00000558335 ROCK1Q13464 1354 aa7.57□□□□□ -1.2
GABPB1-207ENST00000558335 NAIPQ13075 1403 aa7.56□□□□□ -1.2
GABPB1-207ENST00000558335 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
GABPB1-207ENST00000558335 ITSN2Q9NZM3 1697 aa7.56□□□□□ -1.2
GABPB1-207ENST00000558335 NESP48681 1621 aa7.56□□□□□ -1.2
GABPB1-207ENST00000558335 ADAMTS12P58397 1594 aa7.55□□□□□ -1.2
GABPB1-207ENST00000558335 POLR1AO95602 1720 aaPredicted RBP7.55□□□□□ -1.2
GABPB1-207ENST00000558335 LRRIQ1Q96JM4 1722 aa7.54□□□□□ -1.2
GABPB1-207ENST00000558335 IFT140Q96RY7 1462 aa7.54□□□□□ -1.2
GABPB1-207ENST00000558335 MRC2Q9UBG0 1479 aa7.54□□□□□ -1.2
GABPB1-207ENST00000558335 EPRSP07814 1512 aaKnown RBP7.53□□□□□ -1.2
GABPB1-207ENST00000558335 PDIA4P13667 645 aaKnown RBP7.53□□□□□ -1.2
GABPB1-207ENST00000558335 DDX10Q13206 875 aaKnown RBP7.53□□□□□ -1.2
GABPB1-207ENST00000558335 ADGBQ8N7X0 1667 aa7.52□□□□□ -1.21
GABPB1-207ENST00000558335 EIF4G2P78344 907 aaKnown RBP eCLIP7.52□□□□□ -1.21
GABPB1-207ENST00000558335 ZNF326Q5BKZ1 582 aaKnown RBP7.52□□□□□ -1.21
GABPB1-207ENST00000558335 P3H3Q8IVL6 736 aa7.52□□□□□ -1.21
GABPB1-207ENST00000558335 WDR62O43379 1518 aa7.52□□□□□ -1.21
GABPB1-207ENST00000558335 ARID4BQ4LE39 1312 aaPredicted RBP7.52□□□□□ -1.21
GABPB1-207ENST00000558335 PDE4CQ08493 712 aa7.51□□□□□ -1.21
GABPB1-207ENST00000558335 DNMT1P26358 1616 aaKnown RBP7.51□□□□□ -1.21
GABPB1-207ENST00000558335 KIAA0586Q9BVV6 1533 aa7.51□□□□□ -1.21
GABPB1-207ENST00000558335 TDRD9Q8NDG6 1382 aaKnown RBP7.5□□□□□ -1.21
GABPB1-207ENST00000558335 SIN3AQ96ST3 1273 aa7.5□□□□□ -1.21
GABPB1-207ENST00000558335 TAF7LQ5H9L4 462 aa7.49□□□□□ -1.21
GABPB1-207ENST00000558335 RAPGEF6Q8TEU7 1601 aa7.49□□□□□ -1.21
GABPB1-207ENST00000558335 ADCY10Q96PN6 1610 aa7.49□□□□□ -1.21
GABPB1-207ENST00000558335 KIAA0556O60303 1618 aa7.48□□□□□ -1.21
GABPB1-207ENST00000558335 MAGI1Q96QZ7 1491 aaPredicted RBP7.48□□□□□ -1.21
GABPB1-207ENST00000558335 CARMIL2Q6F5E8 1435 aa7.47□□□□□ -1.21
GABPB1-207ENST00000558335 CNTLNQ9NXG0 1405 aa7.47□□□□□ -1.21
GABPB1-207ENST00000558335 TRIM52Q96A61 297 aa7.47□□□□□ -1.21
GABPB1-207ENST00000558335 RPRD2Q5VT52 1461 aaKnown RBP7.47□□□□□ -1.21
GABPB1-207ENST00000558335 FANCIQ9NVI1 1328 aa7.47□□□□□ -1.21
GABPB1-207ENST00000558335 ROCK2O75116 1388 aaKnown RBP7.46□□□□□ -1.21
GABPB1-207ENST00000558335 KTN1Q86UP2 1357 aaKnown RBP7.46□□□□□ -1.21
GABPB1-207ENST00000558335 DAPK1P53355 1430 aa7.46□□□□□ -1.21
GABPB1-207ENST00000558335 DEKP35659 375 aaKnown RBP7.46□□□□□ -1.22
GABPB1-207ENST00000558335 SALL2Q9Y467 1007 aaPredicted RBP7.46□□□□□ -1.22
GABPB1-207ENST00000558335 PTPRKQ15262 1439 aa7.45□□□□□ -1.22
GABPB1-207ENST00000558335 ADGRL2O95490 1459 aa7.45□□□□□ -1.22
GABPB1-207ENST00000558335 FKBP8Q14318 412 aa7.45□□□□□ -1.22
GABPB1-207ENST00000558335 MPHOSPH9Q99550 1183 aa7.45□□□□□ -1.22
GABPB1-207ENST00000558335 CROCC2H7BZ55 1655 aa7.44□□□□□ -1.22
GABPB1-207ENST00000558335 TROQ12816 1431 aaPredicted RBP7.44□□□□□ -1.22
GABPB1-207ENST00000558335 SHANK2Q9UPX8 1470 aa7.44□□□□□ -1.22
GABPB1-207ENST00000558335 FGD1P98174 961 aa7.44□□□□□ -1.22
GABPB1-207ENST00000558335 ANKRD30AQ9BXX3 1397 aa7.44□□□□□ -1.22
GABPB1-207ENST00000558335 NCOA1Q15788 1441 aa7.44□□□□□ -1.22
GABPB1-207ENST00000558335 MAGI3Q5TCQ9 1506 aa7.43□□□□□ -1.22
GABPB1-207ENST00000558335 KCNA4P22459 653 aa7.43□□□□□ -1.22
GABPB1-207ENST00000558335 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
GABPB1-207ENST00000558335 RSPH6AQ9H0K4 717 aa7.43□□□□□ -1.22
GABPB1-207ENST00000558335 GRIN2AQ12879 1464 aa7.43□□□□□ -1.22
GABPB1-207ENST00000558335 ARHGEF12Q9NZN5 1544 aa7.42□□□□□ -1.22
GABPB1-207ENST00000558335 KDM5BQ9UGL1 1544 aa7.42□□□□□ -1.22
GABPB1-207ENST00000558335 KIF14Q15058 1648 aa7.42□□□□□ -1.22
GABPB1-207ENST00000558335 U3KPZ7 1027 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-207ENST00000558335 ANKRD30BQ9BXX2 1392 aa7.42□□□□□ -1.22
GABPB1-207ENST00000558335 AMER1Q5JTC6 1135 aaPredicted RBP7.41□□□□□ -1.22
GABPB1-207ENST00000558335 ZBED9Q6R2W3 1325 aa7.41□□□□□ -1.22
GABPB1-207ENST00000558335 CCDC7Q96M83 1385 aa7.41□□□□□ -1.22
GABPB1-207ENST00000558335 SYNJ2O15056 1496 aa7.41□□□□□ -1.22
GABPB1-207ENST00000558335 HSPA5P11021 654 aaKnown RBP7.4□□□□□ -1.22
GABPB1-207ENST00000558335 HNRNPUQ00839 825 aaKnown RBP eCLIP7.4□□□□□ -1.22
GABPB1-207ENST00000558335 RRP7BPQ9NSQ0 103 aa7.4□□□□□ -1.22
GABPB1-207ENST00000558335 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
GABPB1-207ENST00000558335 ABCC5O15440 1437 aa7.4□□□□□ -1.22
GABPB1-207ENST00000558335 KIAA1107Q9UPP5 1409 aa7.4□□□□□ -1.22
GABPB1-207ENST00000558335 CDK13Q14004 1512 aaKnown RBP7.4□□□□□ -1.22
GABPB1-207ENST00000558335 DISP1Q96F81 1524 aa7.4□□□□□ -1.22
GABPB1-207ENST00000558335 EIF4G3O43432 1585 aaKnown RBP7.4□□□□□ -1.22
GABPB1-207ENST00000558335 ARHGEF5Q12774 1597 aa7.39□□□□□ -1.23
GABPB1-207ENST00000558335 KDM5DQ9BY66 1539 aa7.39□□□□□ -1.23
GABPB1-207ENST00000558335 NUP153P49790 1475 aaKnown RBP7.39□□□□□ -1.23
GABPB1-207ENST00000558335 CAMSAP2Q08AD1 1489 aa7.39□□□□□ -1.23
GABPB1-207ENST00000558335 KLHL34Q8N239 644 aa7.39□□□□□ -1.23
GABPB1-207ENST00000558335 SLC4A1APQ9BWU0 796 aaKnown RBP7.39□□□□□ -1.23
GABPB1-207ENST00000558335 TEX14Q8IWB6 1497 aa7.38□□□□□ -1.23
GABPB1-207ENST00000558335 WASHC2AQ641Q2 1341 aa7.38□□□□□ -1.23
GABPB1-207ENST00000558335 L3MBTL2Q969R5 705 aa7.38□□□□□ -1.23
GABPB1-207ENST00000558335 CFDP1Q9UEE9 299 aaPredicted RBP7.38□□□□□ -1.23
GABPB1-207ENST00000558335 UHRF1BP1Q6BDS2 1440 aa7.37□□□□□ -1.23
GABPB1-207ENST00000558335 PRKRIP1Q9H875 184 aaPredicted RBP7.37□□□□□ -1.23
GABPB1-207ENST00000558335 RBM19Q9Y4C8 960 aaKnown RBP7.37□□□□□ -1.23
GABPB1-207ENST00000558335 SPATA31E1Q6ZUB1 1445 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 TSPY4P0CV99 314 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 TSPY10P0CW01 314 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 CHIC2Q9UKJ5 165 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 GPATCH8Q9UKJ3 1502 aaKnown RBP7.36□□□□□ -1.23
GABPB1-207ENST00000558335 RALGAPBQ86X10 1494 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 PLEKHH2Q8IVE3 1493 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 MBD5Q9P267 1494 aa7.36□□□□□ -1.23
GABPB1-207ENST00000558335 INSRP06213 1382 aa7.35□□□□□ -1.23
GABPB1-207ENST00000558335 WASHC2CQ9Y4E1 1318 aa7.35□□□□□ -1.23
GABPB1-207ENST00000558335 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
GABPB1-207ENST00000558335 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms