RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 ARHGAP5Q13017 1502 aa32.86■■■□□ 2.85
SEC23A-213ENST00000557280 GPATCH8Q9UKJ3 1502 aaKnown RBP32.86■■■□□ 2.85
SEC23A-213ENST00000557280 CFAP74Q9C0B2 1584 aa32.84■■■□□ 2.85
SEC23A-213ENST00000557280 AKNAQ7Z591 1439 aa32.82■■■□□ 2.84
SEC23A-213ENST00000557280 CCNB3Q8WWL7 1395 aa32.82■■■□□ 2.84
SEC23A-213ENST00000557280 PHLDB1Q86UU1 1377 aa32.77■■■□□ 2.84
SEC23A-213ENST00000557280 EFCAB2Q5VUJ9 269 aa32.76■■■□□ 2.83
SEC23A-213ENST00000557280 ADGRL1O94910 1474 aa32.74■■■□□ 2.83
SEC23A-213ENST00000557280 FRMPD1Q5SYB0 1578 aa32.74■■■□□ 2.83
SEC23A-213ENST00000557280 ITSN2Q9NZM3 1697 aa32.73■■■□□ 2.83
SEC23A-213ENST00000557280 SAMD9LQ8IVG5 1584 aa32.71■■■□□ 2.83
SEC23A-213ENST00000557280 RAPGEF3O95398 923 aa32.69■■■□□ 2.82
SEC23A-213ENST00000557280 SCAPERQ9BY12 1400 aa32.68■■■□□ 2.82
SEC23A-213ENST00000557280 ABCC1P33527 1531 aa32.68■■■□□ 2.82
SEC23A-213ENST00000557280 CFDP1Q9UEE9 299 aaPredicted RBP32.68■■■□□ 2.82
SEC23A-213ENST00000557280 DENND4BO75064 1496 aaPredicted RBP32.67■■■□□ 2.82
SEC23A-213ENST00000557280 ARHGEF12Q9NZN5 1544 aa32.67■■■□□ 2.82
SEC23A-213ENST00000557280 RICTORQ6R327 1708 aa32.66■■■□□ 2.82
SEC23A-213ENST00000557280 ZNF777Q9ULD5 760 aaPredicted RBP32.66■■■□□ 2.82
SEC23A-213ENST00000557280 POGZQ7Z3K3 1410 aa32.63■■■□□ 2.81
SEC23A-213ENST00000557280 PPARGC1BQ86YN6 1023 aaKnown RBP32.63■■■□□ 2.81
SEC23A-213ENST00000557280 MYOM3Q5VTT5 1437 aa32.61■■■□□ 2.81
SEC23A-213ENST00000557280 ZNF644Q9H582 1327 aaPredicted RBP32.61■■■□□ 2.81
SEC23A-213ENST00000557280 SYCP2Q9BX26 1530 aa32.61■■■□□ 2.81
SEC23A-213ENST00000557280 TRAPPC8Q9Y2L5 1435 aa32.57■■■□□ 2.8
SEC23A-213ENST00000557280 CAMSAP2Q08AD1 1489 aa32.55■■■□□ 2.8
SEC23A-213ENST00000557280 ZMYM4Q5VZL5 1548 aa32.54■■■□□ 2.8
SEC23A-213ENST00000557280 ZNF518AQ6AHZ1 1483 aa32.52■■■□□ 2.8
SEC23A-213ENST00000557280 PLEKHH2Q8IVE3 1493 aa32.52■■■□□ 2.8
SEC23A-213ENST00000557280 KDM5CP41229 1560 aa32.52■■■□□ 2.8
SEC23A-213ENST00000557280 KIAA1107Q9UPP5 1409 aa32.51■■■□□ 2.8
SEC23A-213ENST00000557280 HNRNPMP52272 730 aaKnown RBP eCLIP32.51■■■□□ 2.79
SEC23A-213ENST00000557280 AFAP1Q8N556 730 aa32.51■■■□□ 2.79
SEC23A-213ENST00000557280 MIA2Q96PC5 1412 aa32.5■■■□□ 2.79
SEC23A-213ENST00000557280 MBD5Q9P267 1494 aa32.48■■■□□ 2.79
SEC23A-213ENST00000557280 FGD6Q6ZV73 1430 aa32.47■■■□□ 2.79
SEC23A-213ENST00000557280 YEATS2Q9ULM3 1422 aa32.44■■■□□ 2.78
SEC23A-213ENST00000557280 ARHGEF40Q8TER5 1519 aa32.44■■■□□ 2.78
SEC23A-213ENST00000557280 PTPN23Q9H3S7 1636 aa32.44■■■□□ 2.78
SEC23A-213ENST00000557280 ZFYVE16Q7Z3T8 1539 aa32.42■■■□□ 2.78
SEC23A-213ENST00000557280 HECW2Q9P2P5 1572 aa32.41■■■□□ 2.78
SEC23A-213ENST00000557280 TCOF1Q13428 1488 aaKnown RBP32.39■■■□□ 2.78
SEC23A-213ENST00000557280 MAGI2Q86UL8 1455 aa32.38■■■□□ 2.77
SEC23A-213ENST00000557280 ARHGEF5Q12774 1597 aa32.36■■■□□ 2.77
SEC23A-213ENST00000557280 MLH3Q9UHC1 1453 aa32.36■■■□□ 2.77
SEC23A-213ENST00000557280 CCDC141Q6ZP82 1450 aa32.35■■■□□ 2.77
SEC23A-213ENST00000557280 KIDINS220Q9ULH0 1771 aa32.35■■■□□ 2.77
SEC23A-213ENST00000557280 INO80Q9ULG1 1556 aaPredicted RBP32.34■■■□□ 2.77
SEC23A-213ENST00000557280 ABCA6Q8N139 1617 aa32.33■■■□□ 2.77
SEC23A-213ENST00000557280 DIP2CQ9Y2E4 1556 aa32.32■■■□□ 2.76
SEC23A-213ENST00000557280 ATP7AQ04656 1500 aa32.31■■■□□ 2.76
SEC23A-213ENST00000557280 SPAG9O60271 1321 aaKnown RBP32.3■■■□□ 2.76
SEC23A-213ENST00000557280 SIGLEC1Q9BZZ2 1709 aa32.3■■■□□ 2.76
SEC23A-213ENST00000557280 MYT1LQ9UL68 1186 aa32.27■■■□□ 2.76
SEC23A-213ENST00000557280 ATP10AO60312 1499 aa32.24■■■□□ 2.75
SEC23A-213ENST00000557280 DNMT1P26358 1616 aaKnown RBP32.24■■■□□ 2.75
SEC23A-213ENST00000557280 FAM50AQ14320 339 aaKnown RBP32.23■■■□□ 2.75
SEC23A-213ENST00000557280 ABCC5O15440 1437 aa32.23■■■□□ 2.75
SEC23A-213ENST00000557280 CROCC2H7BZ55 1655 aa32.22■■■□□ 2.75
SEC23A-213ENST00000557280 C9orf84Q5VXU9 1444 aa32.22■■■□□ 2.75
SEC23A-213ENST00000557280 DAPK1P53355 1430 aa32.21■■■□□ 2.75
SEC23A-213ENST00000557280 RSPH4AQ5TD94 716 aa32.21■■■□□ 2.75
SEC23A-213ENST00000557280 MAST1Q9Y2H9 1570 aa32.19■■■□□ 2.74
SEC23A-213ENST00000557280 RTEL1-TNFRSF6BF6WH68 1400 aa32.19■■■□□ 2.74
SEC23A-213ENST00000557280 RRBP1Q9P2E9 1410 aaKnown RBP32.17■■■□□ 2.74
SEC23A-213ENST00000557280 SHANK2Q9UPX8 1470 aa32.16■■■□□ 2.74
SEC23A-213ENST00000557280 REREQ9P2R6 1566 aa32.15■■■□□ 2.74
SEC23A-213ENST00000557280 TSPY4P0CV99 314 aa32.13■■■□□ 2.73
SEC23A-213ENST00000557280 TSPY10P0CW01 314 aa32.13■■■□□ 2.73
SEC23A-213ENST00000557280 ADGBQ8N7X0 1667 aa32.13■■■□□ 2.73
SEC23A-213ENST00000557280 PLXNC1O60486 1568 aa32.11■■■□□ 2.73
SEC23A-213ENST00000557280 ARID4BQ4LE39 1312 aaPredicted RBP32.1■■■□□ 2.73
SEC23A-213ENST00000557280 A2MP01023 1474 aa32.09■■■□□ 2.73
SEC23A-213ENST00000557280 PTPRKQ15262 1439 aa32.09■■■□□ 2.73
SEC23A-213ENST00000557280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.07■■■□□ 2.73
SEC23A-213ENST00000557280 BCORL1Q5H9F3 1711 aa32.07■■■□□ 2.72
SEC23A-213ENST00000557280 KDM4FA0A1W2PPD8 638 aa32.06■■■□□ 2.72
SEC23A-213ENST00000557280 AGLP35573 1532 aa32.05■■■□□ 2.72
SEC23A-213ENST00000557280 CHIC2Q9UKJ5 165 aa32.04■■■□□ 2.72
SEC23A-213ENST00000557280 ADAMTSL3P82987 1691 aa32■■■□□ 2.71
SEC23A-213ENST00000557280 ADGRL2O95490 1459 aa31.99■■■□□ 2.71
SEC23A-213ENST00000557280 DHX29Q7Z478 1369 aaKnown RBP31.99■■■□□ 2.71
SEC23A-213ENST00000557280 ITGAEP38570 1179 aa31.99■■■□□ 2.71
SEC23A-213ENST00000557280 MLECQ14165 292 aa31.99■■■□□ 2.71
SEC23A-213ENST00000557280 KIF15Q9NS87 1388 aa31.97■■■□□ 2.71
SEC23A-213ENST00000557280 MADDQ8WXG6 1647 aa31.96■■■□□ 2.71
SEC23A-213ENST00000557280 NCOA1Q15788 1441 aa31.95■■■□□ 2.71
SEC23A-213ENST00000557280 RRP7BPQ9NSQ0 103 aa31.95■■■□□ 2.71
SEC23A-213ENST00000557280 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
SEC23A-213ENST00000557280 DUOX2Q9NRD8 1548 aa31.93■■■□□ 2.7
SEC23A-213ENST00000557280 FER1L4A9Z1Z3 1794 aa31.86■■■□□ 2.69
SEC23A-213ENST00000557280 RIMS1Q86UR5 1692 aaKnown RBP31.86■■■□□ 2.69
SEC23A-213ENST00000557280 ROCK1Q13464 1354 aa31.85■■■□□ 2.69
SEC23A-213ENST00000557280 EIF2AK4Q9P2K8 1649 aaKnown RBP31.85■■■□□ 2.69
SEC23A-213ENST00000557280 KIF3BO15066 747 aa31.84■■■□□ 2.69
SEC23A-213ENST00000557280 ERBINQ96RT1 1412 aa31.83■■■□□ 2.69
SEC23A-213ENST00000557280 RNF17Q9BXT8 1623 aaKnown RBP31.8■■■□□ 2.68
SEC23A-213ENST00000557280 GGT6Q6P531 493 aa31.8■■■□□ 2.68
SEC23A-213ENST00000557280 MROH1Q8NDA8 1641 aa31.78■■■□□ 2.68
SEC23A-213ENST00000557280 PTPRMP28827 1452 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms