RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 HECW1Q76N89 1606 aa21.76■■□□□ 1.07
PSEN1-220ENST00000557037 RAPGEF6Q8TEU7 1601 aa21.75■■□□□ 1.07
PSEN1-220ENST00000557037 MAGI2Q86UL8 1455 aa21.75■■□□□ 1.07
PSEN1-220ENST00000557037 CFAP74Q9C0B2 1584 aa21.73■■□□□ 1.07
PSEN1-220ENST00000557037 PLEKHD1A6NEE1 506 aa21.71■■□□□ 1.07
PSEN1-220ENST00000557037 IQSEC2Q5JU85 1478 aa21.71■■□□□ 1.07
PSEN1-220ENST00000557037 SETD1BQ9UPS6 1966 aaKnown RBP21.7■■□□□ 1.07
PSEN1-220ENST00000557037 UBAP1LF5GYI3 381 aa21.7■■□□□ 1.06
PSEN1-220ENST00000557037 ATP10AO60312 1499 aa21.7■■□□□ 1.06
PSEN1-220ENST00000557037 NUP153P49790 1475 aaKnown RBP21.7■■□□□ 1.06
PSEN1-220ENST00000557037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.68■■□□□ 1.06
PSEN1-220ENST00000557037 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
PSEN1-220ENST00000557037 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
PSEN1-220ENST00000557037 PRXQ9BXM0 1461 aa21.65■■□□□ 1.06
PSEN1-220ENST00000557037 SAMD9Q5K651 1589 aa21.61■■□□□ 1.05
PSEN1-220ENST00000557037 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
PSEN1-220ENST00000557037 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
PSEN1-220ENST00000557037 ZNF335Q9H4Z2 1342 aaPredicted RBP21.58■■□□□ 1.05
PSEN1-220ENST00000557037 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
PSEN1-220ENST00000557037 C3P01024 1663 aa21.55■■□□□ 1.04
PSEN1-220ENST00000557037 MYT1LQ9UL68 1186 aa21.54■■□□□ 1.04
PSEN1-220ENST00000557037 HSPA1LP34931 641 aa21.53■■□□□ 1.04
PSEN1-220ENST00000557037 PLCH2O75038 1416 aa21.53■■□□□ 1.04
PSEN1-220ENST00000557037 TRAPPC8Q9Y2L5 1435 aa21.53■■□□□ 1.04
PSEN1-220ENST00000557037 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
PSEN1-220ENST00000557037 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
PSEN1-220ENST00000557037 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
PSEN1-220ENST00000557037 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
PSEN1-220ENST00000557037 CAMSAP1Q5T5Y3 1602 aa21.48■■□□□ 1.03
PSEN1-220ENST00000557037 EFCAB2Q5VUJ9 269 aa21.48■■□□□ 1.03
PSEN1-220ENST00000557037 PIP4K2BP78356 416 aa21.47■■□□□ 1.03
PSEN1-220ENST00000557037 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
PSEN1-220ENST00000557037 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
PSEN1-220ENST00000557037 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
PSEN1-220ENST00000557037 ZNF518AQ6AHZ1 1483 aa21.42■■□□□ 1.02
PSEN1-220ENST00000557037 KDM5CP41229 1560 aa21.38■■□□□ 1.01
PSEN1-220ENST00000557037 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
PSEN1-220ENST00000557037 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
PSEN1-220ENST00000557037 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
PSEN1-220ENST00000557037 PKD2Q13563 968 aa21.34■■□□□ 1.01
PSEN1-220ENST00000557037 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
PSEN1-220ENST00000557037 AGLP35573 1532 aa21.34■■□□□ 1.01
PSEN1-220ENST00000557037 TOM1O60784 492 aa21.33■■□□□ 1.01
PSEN1-220ENST00000557037 ARHGAP5Q13017 1502 aa21.33■■□□□ 1
PSEN1-220ENST00000557037 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
PSEN1-220ENST00000557037 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
PSEN1-220ENST00000557037 NPATQ14207 1427 aa21.31■■□□□ 1
PSEN1-220ENST00000557037 CSRNP3Q8WYN3 585 aa21.3■■□□□ 1
PSEN1-220ENST00000557037 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
PSEN1-220ENST00000557037 MLH3Q9UHC1 1453 aa21.29■■□□□ 1
PSEN1-220ENST00000557037 ZMYM3Q14202 1370 aa21.29■■□□□ 1
PSEN1-220ENST00000557037 KIF14Q15058 1648 aa21.29■■□□□ 1
PSEN1-220ENST00000557037 PLA2R1Q13018 1463 aa21.27■■□□□ 1
PSEN1-220ENST00000557037 TCOF1Q13428 1488 aaKnown RBP21.27■■□□□ 1
PSEN1-220ENST00000557037 SUPT6HQ7KZ85 1726 aaKnown RBP21.25■□□□□ 0.99
PSEN1-220ENST00000557037 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
PSEN1-220ENST00000557037 CEP170BQ9Y4F5 1589 aaPredicted RBP21.22■□□□□ 0.99
PSEN1-220ENST00000557037 MROH2AA6NES4 1674 aa21.21■□□□□ 0.99
PSEN1-220ENST00000557037 CDK11AQ9UQ88 783 aaPredicted RBP21.21■□□□□ 0.99
PSEN1-220ENST00000557037 ZNF142P52746 1687 aaPredicted RBP21.21■□□□□ 0.99
PSEN1-220ENST00000557037 RGS17Q9UGC6 210 aaPredicted RBP21.18■□□□□ 0.98
PSEN1-220ENST00000557037 CPS1P31327 1500 aa21.18■□□□□ 0.98
PSEN1-220ENST00000557037 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
PSEN1-220ENST00000557037 PTPRKQ15262 1439 aa21.17■□□□□ 0.98
PSEN1-220ENST00000557037 CLTCQ00610 1675 aaKnown RBP21.16■□□□□ 0.98
PSEN1-220ENST00000557037 SHANK2Q9UPX8 1470 aa21.16■□□□□ 0.98
PSEN1-220ENST00000557037 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
PSEN1-220ENST00000557037 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
PSEN1-220ENST00000557037 ABCC1P33527 1531 aa21.14■□□□□ 0.98
PSEN1-220ENST00000557037 ALKQ9UM73 1620 aa21.14■□□□□ 0.97
PSEN1-220ENST00000557037 ITSN2Q9NZM3 1697 aa21.13■□□□□ 0.97
PSEN1-220ENST00000557037 CLIP1P30622 1438 aa21.12■□□□□ 0.97
PSEN1-220ENST00000557037 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.97
PSEN1-220ENST00000557037 GGT6Q6P531 493 aa21.08■□□□□ 0.97
PSEN1-220ENST00000557037 NEURL4Q96JN8 1562 aa21.07■□□□□ 0.96
PSEN1-220ENST00000557037 DNMT1P26358 1616 aaKnown RBP21.07■□□□□ 0.96
PSEN1-220ENST00000557037 PREX2Q70Z35 1606 aa21.05■□□□□ 0.96
PSEN1-220ENST00000557037 SAMD9LQ8IVG5 1584 aa21.05■□□□□ 0.96
PSEN1-220ENST00000557037 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
PSEN1-220ENST00000557037 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-220ENST00000557037 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
PSEN1-220ENST00000557037 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-220ENST00000557037 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
PSEN1-220ENST00000557037 POTEAQ6S8J7 498 aa21.03■□□□□ 0.96
PSEN1-220ENST00000557037 HNRNPMP52272 730 aaKnown RBP eCLIP20.99■□□□□ 0.95
PSEN1-220ENST00000557037 ANKLE2Q86XL3 938 aa20.99■□□□□ 0.95
PSEN1-220ENST00000557037 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
PSEN1-220ENST00000557037 A2MP01023 1474 aa20.98■□□□□ 0.95
PSEN1-220ENST00000557037 FBXO31Q5XUX0 539 aaPredicted RBP20.97■□□□□ 0.95
PSEN1-220ENST00000557037 LRRIQ1Q96JM4 1722 aa20.97■□□□□ 0.95
PSEN1-220ENST00000557037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
PSEN1-220ENST00000557037 PLXNC1O60486 1568 aa20.96■□□□□ 0.95
PSEN1-220ENST00000557037 ATP7AQ04656 1500 aa20.95■□□□□ 0.94
PSEN1-220ENST00000557037 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
PSEN1-220ENST00000557037 TNRQ92752 1358 aa20.95■□□□□ 0.94
PSEN1-220ENST00000557037 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-220ENST00000557037 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
PSEN1-220ENST00000557037 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
PSEN1-220ENST00000557037 ARHGAP35Q9NRY4 1499 aa20.93■□□□□ 0.94
PSEN1-220ENST00000557037 EEA1Q15075 1411 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms