RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
PSEN1-218ENST00000556864 KDM6BO15054 1643 aa27.32■■□□□ 1.96
PSEN1-218ENST00000556864 KANK4Q5T7N3 995 aaPredicted RBP27.31■■□□□ 1.96
PSEN1-218ENST00000556864 GPATCH8Q9UKJ3 1502 aaKnown RBP27.29■■□□□ 1.96
PSEN1-218ENST00000556864 CDC42BPBQ9Y5S2 1711 aa27.28■■□□□ 1.96
PSEN1-218ENST00000556864 EFCAB2Q5VUJ9 269 aa27.26■■□□□ 1.95
PSEN1-218ENST00000556864 AKNAQ7Z591 1439 aa27.24■■□□□ 1.95
PSEN1-218ENST00000556864 ADGRL1O94910 1474 aa27.22■■□□□ 1.95
PSEN1-218ENST00000556864 MYOM3Q5VTT5 1437 aa27.2■■□□□ 1.94
PSEN1-218ENST00000556864 ABCC1P33527 1531 aa27.2■■□□□ 1.94
PSEN1-218ENST00000556864 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
PSEN1-218ENST00000556864 PLEKHH2Q8IVE3 1493 aa27.19■■□□□ 1.94
PSEN1-218ENST00000556864 SAMD9LQ8IVG5 1584 aa27.18■■□□□ 1.94
PSEN1-218ENST00000556864 DENND4BO75064 1496 aaPredicted RBP27.16■■□□□ 1.94
PSEN1-218ENST00000556864 MIA2Q96PC5 1412 aa27.15■■□□□ 1.94
PSEN1-218ENST00000556864 POGZQ7Z3K3 1410 aa27.13■■□□□ 1.93
PSEN1-218ENST00000556864 SCAPERQ9BY12 1400 aa27.13■■□□□ 1.93
PSEN1-218ENST00000556864 COL17A1Q9UMD9 1497 aaPredicted RBP27.12■■□□□ 1.93
PSEN1-218ENST00000556864 FRMPD1Q5SYB0 1578 aa27.11■■□□□ 1.93
PSEN1-218ENST00000556864 CAMSAP2Q08AD1 1489 aa27.11■■□□□ 1.93
PSEN1-218ENST00000556864 SYCP2Q9BX26 1530 aa27.11■■□□□ 1.93
PSEN1-218ENST00000556864 ZNF777Q9ULD5 760 aaPredicted RBP27.1■■□□□ 1.93
PSEN1-218ENST00000556864 RICTORQ6R327 1708 aa27.1■■□□□ 1.93
PSEN1-218ENST00000556864 KIAA1107Q9UPP5 1409 aa27.09■■□□□ 1.93
PSEN1-218ENST00000556864 ZNF518AQ6AHZ1 1483 aa27.09■■□□□ 1.93
PSEN1-218ENST00000556864 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
PSEN1-218ENST00000556864 ZMYM4Q5VZL5 1548 aa27.07■■□□□ 1.92
PSEN1-218ENST00000556864 PTPN23Q9H3S7 1636 aa27.05■■□□□ 1.92
PSEN1-218ENST00000556864 KDM5CP41229 1560 aa27.03■■□□□ 1.92
PSEN1-218ENST00000556864 ARHGEF12Q9NZN5 1544 aa27.03■■□□□ 1.92
PSEN1-218ENST00000556864 TCOF1Q13428 1488 aaKnown RBP27.01■■□□□ 1.91
PSEN1-218ENST00000556864 PPARGC1BQ86YN6 1023 aaKnown RBP27.01■■□□□ 1.91
PSEN1-218ENST00000556864 RAPGEF3O95398 923 aa27■■□□□ 1.91
PSEN1-218ENST00000556864 ARHGEF5Q12774 1597 aa27■■□□□ 1.91
PSEN1-218ENST00000556864 CCDC141Q6ZP82 1450 aa26.99■■□□□ 1.91
PSEN1-218ENST00000556864 HECW2Q9P2P5 1572 aa26.98■■□□□ 1.91
PSEN1-218ENST00000556864 ARHGEF40Q8TER5 1519 aa26.98■■□□□ 1.91
PSEN1-218ENST00000556864 MAGI2Q86UL8 1455 aa26.98■■□□□ 1.91
PSEN1-218ENST00000556864 TRAPPC8Q9Y2L5 1435 aa26.98■■□□□ 1.91
PSEN1-218ENST00000556864 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
PSEN1-218ENST00000556864 ZFYVE16Q7Z3T8 1539 aa26.96■■□□□ 1.91
PSEN1-218ENST00000556864 MBD5Q9P267 1494 aa26.96■■□□□ 1.91
PSEN1-218ENST00000556864 HNRNPMP52272 730 aaKnown RBP eCLIP26.92■■□□□ 1.9
PSEN1-218ENST00000556864 MLH3Q9UHC1 1453 aa26.92■■□□□ 1.9
PSEN1-218ENST00000556864 INO80Q9ULG1 1556 aaPredicted RBP26.91■■□□□ 1.9
PSEN1-218ENST00000556864 RSPH4AQ5TD94 716 aa26.9■■□□□ 1.9
PSEN1-218ENST00000556864 AFAP1Q8N556 730 aa26.89■■□□□ 1.9
PSEN1-218ENST00000556864 DNMT1P26358 1616 aaKnown RBP26.89■■□□□ 1.9
PSEN1-218ENST00000556864 ATP7AQ04656 1500 aa26.89■■□□□ 1.89
PSEN1-218ENST00000556864 CROCC2H7BZ55 1655 aa26.88■■□□□ 1.89
PSEN1-218ENST00000556864 SPAG9O60271 1321 aaKnown RBP26.87■■□□□ 1.89
PSEN1-218ENST00000556864 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
PSEN1-218ENST00000556864 RRBP1Q9P2E9 1410 aaKnown RBP26.86■■□□□ 1.89
PSEN1-218ENST00000556864 MAST1Q9Y2H9 1570 aa26.86■■□□□ 1.89
PSEN1-218ENST00000556864 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
PSEN1-218ENST00000556864 KIDINS220Q9ULH0 1771 aa26.84■■□□□ 1.89
PSEN1-218ENST00000556864 DIP2CQ9Y2E4 1556 aa26.84■■□□□ 1.89
PSEN1-218ENST00000556864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.89
PSEN1-218ENST00000556864 ABCA6Q8N139 1617 aa26.83■■□□□ 1.89
PSEN1-218ENST00000556864 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
PSEN1-218ENST00000556864 FAM50AQ14320 339 aaKnown RBP26.83■■□□□ 1.89
PSEN1-218ENST00000556864 RTEL1-TNFRSF6BF6WH68 1400 aa26.82■■□□□ 1.88
PSEN1-218ENST00000556864 DAPK1P53355 1430 aa26.82■■□□□ 1.88
PSEN1-218ENST00000556864 TSPY4P0CV99 314 aa26.8■■□□□ 1.88
PSEN1-218ENST00000556864 TSPY10P0CW01 314 aa26.8■■□□□ 1.88
PSEN1-218ENST00000556864 ABCC5O15440 1437 aa26.8■■□□□ 1.88
PSEN1-218ENST00000556864 C9orf84Q5VXU9 1444 aa26.8■■□□□ 1.88
PSEN1-218ENST00000556864 REREQ9P2R6 1566 aa26.79■■□□□ 1.88
PSEN1-218ENST00000556864 ATP10AO60312 1499 aa26.78■■□□□ 1.88
PSEN1-218ENST00000556864 PLXNC1O60486 1568 aa26.77■■□□□ 1.88
PSEN1-218ENST00000556864 ADGBQ8N7X0 1667 aa26.76■■□□□ 1.87
PSEN1-218ENST00000556864 A2MP01023 1474 aa26.69■■□□□ 1.86
PSEN1-218ENST00000556864 ADGRL2O95490 1459 aa26.68■■□□□ 1.86
PSEN1-218ENST00000556864 AGLP35573 1532 aa26.67■■□□□ 1.86
PSEN1-218ENST00000556864 ANKRD30AQ9BXX3 1397 aa26.67■■□□□ 1.86
PSEN1-218ENST00000556864 DUOX2Q9NRD8 1548 aa26.64■■□□□ 1.85
PSEN1-218ENST00000556864 KIF15Q9NS87 1388 aa26.62■■□□□ 1.85
PSEN1-218ENST00000556864 ARID4BQ4LE39 1312 aaPredicted RBP26.62■■□□□ 1.85
PSEN1-218ENST00000556864 SIGLEC1Q9BZZ2 1709 aa26.62■■□□□ 1.85
PSEN1-218ENST00000556864 ROCK1Q13464 1354 aa26.6■■□□□ 1.85
PSEN1-218ENST00000556864 EIF2AK4Q9P2K8 1649 aaKnown RBP26.6■■□□□ 1.85
PSEN1-218ENST00000556864 DHX29Q7Z478 1369 aaKnown RBP26.59■■□□□ 1.85
PSEN1-218ENST00000556864 PTPRKQ15262 1439 aa26.58■■□□□ 1.85
PSEN1-218ENST00000556864 NCOA1Q15788 1441 aa26.58■■□□□ 1.85
PSEN1-218ENST00000556864 ITGAEP38570 1179 aa26.58■■□□□ 1.85
PSEN1-218ENST00000556864 BCORL1Q5H9F3 1711 aa26.58■■□□□ 1.85
PSEN1-218ENST00000556864 ERBINQ96RT1 1412 aa26.57■■□□□ 1.84
PSEN1-218ENST00000556864 CHIC2Q9UKJ5 165 aa26.57■■□□□ 1.84
PSEN1-218ENST00000556864 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
PSEN1-218ENST00000556864 ADAMTSL3P82987 1691 aa26.5■■□□□ 1.83
PSEN1-218ENST00000556864 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
PSEN1-218ENST00000556864 GCC2Q8IWJ2 1684 aa26.48■■□□□ 1.83
PSEN1-218ENST00000556864 FAM135AQ9P2D6 1515 aa26.48■■□□□ 1.83
PSEN1-218ENST00000556864 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
PSEN1-218ENST00000556864 MADDQ8WXG6 1647 aa26.46■■□□□ 1.83
PSEN1-218ENST00000556864 FER1L4A9Z1Z3 1794 aa26.46■■□□□ 1.83
PSEN1-218ENST00000556864 MLECQ14165 292 aa26.44■■□□□ 1.82
PSEN1-218ENST00000556864 KIF3BO15066 747 aa26.43■■□□□ 1.82
PSEN1-218ENST00000556864 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
PSEN1-218ENST00000556864 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms