RNA–Protein interactions for RNA: ENST00000556600.1

NUMB-221, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-221ENST00000556600 ZFYVE16Q7Z3T8 1539 aa34.24■■■■□ 3.07
NUMB-221ENST00000556600 MAGI2Q86UL8 1455 aa34.22■■■■□ 3.07
NUMB-221ENST00000556600 MYO5CQ9NQX4 1742 aa34.21■■■■□ 3.07
NUMB-221ENST00000556600 SIGLEC1Q9BZZ2 1709 aa34.2■■■■□ 3.07
NUMB-221ENST00000556600 CASKIN1Q8WXD9 1431 aa34.2■■■■□ 3.06
NUMB-221ENST00000556600 PCF11O94913 1555 aaKnown RBP34.19■■■■□ 3.06
NUMB-221ENST00000556600 EFCAB2Q5VUJ9 269 aa34.19■■■■□ 3.06
NUMB-221ENST00000556600 CLIP1P30622 1438 aa34.17■■■■□ 3.06
NUMB-221ENST00000556600 CCDC18Q5T9S5 1454 aa34.11■■■■□ 3.05
NUMB-221ENST00000556600 ARHGAP5Q13017 1502 aa34.1■■■■□ 3.05
NUMB-221ENST00000556600 RIMS1Q86UR5 1692 aaKnown RBP34.09■■■■□ 3.05
NUMB-221ENST00000556600 ILDR1Q86SU0 546 aaPredicted RBP34.08■■■■□ 3.05
NUMB-221ENST00000556600 FYCO1Q9BQS8 1478 aa34.05■■■■□ 3.04
NUMB-221ENST00000556600 ATP10AO60312 1499 aa34.04■■■■□ 3.04
NUMB-221ENST00000556600 ZNF518AQ6AHZ1 1483 aa34.04■■■■□ 3.04
NUMB-221ENST00000556600 KDM5CP41229 1560 aa34.02■■■■□ 3.04
NUMB-221ENST00000556600 CDC42BPBQ9Y5S2 1711 aa34.02■■■■□ 3.04
NUMB-221ENST00000556600 AFAP1Q8N556 730 aa34.02■■■■□ 3.04
NUMB-221ENST00000556600 LMTK3Q96Q04 1460 aa34.01■■■■□ 3.04
NUMB-221ENST00000556600 C9orf84Q5VXU9 1444 aa34.01■■■■□ 3.03
NUMB-221ENST00000556600 PREX2Q70Z35 1606 aa33.99■■■■□ 3.03
NUMB-221ENST00000556600 MLECQ14165 292 aa33.98■■■■□ 3.03
NUMB-221ENST00000556600 ARHGEF12Q9NZN5 1544 aa33.94■■■■□ 3.02
NUMB-221ENST00000556600 ABCC1P33527 1531 aa33.93■■■■□ 3.02
NUMB-221ENST00000556600 TRAPPC8Q9Y2L5 1435 aa33.91■■■■□ 3.02
NUMB-221ENST00000556600 FER1L4A9Z1Z3 1794 aa33.9■■■■□ 3.02
NUMB-221ENST00000556600 DIP2CQ9Y2E4 1556 aa33.89■■■■□ 3.02
NUMB-221ENST00000556600 MLH3Q9UHC1 1453 aa33.88■■■■□ 3.01
NUMB-221ENST00000556600 CDC42BPAQ5VT25 1732 aa33.88■■■■□ 3.01
NUMB-221ENST00000556600 PLPPR3Q6T4P5 718 aa33.88■■■■□ 3.01
NUMB-221ENST00000556600 ITSN2Q9NZM3 1697 aa33.84■■■■□ 3.01
NUMB-221ENST00000556600 ABCA6Q8N139 1617 aa33.83■■■■□ 3.01
NUMB-221ENST00000556600 REREQ9P2R6 1566 aa33.83■■■■□ 3.01
NUMB-221ENST00000556600 GPATCH8Q9UKJ3 1502 aaKnown RBP33.82■■■■□ 3
NUMB-221ENST00000556600 MYT1LQ9UL68 1186 aa33.8■■■■□ 3
NUMB-221ENST00000556600 HSPA2P54652 639 aa33.79■■■■□ 3
NUMB-221ENST00000556600 SAMD9LQ8IVG5 1584 aa33.77■■■■□ 3
NUMB-221ENST00000556600 KIDINS220Q9ULH0 1771 aa33.74■■■□□ 2.99
NUMB-221ENST00000556600 CEBPAP49715 358 aaPredicted RBP33.73■■■□□ 2.99
NUMB-221ENST00000556600 AGLP35573 1532 aa33.73■■■□□ 2.99
NUMB-221ENST00000556600 ZNF777Q9ULD5 760 aaPredicted RBP33.72■■■□□ 2.99
NUMB-221ENST00000556600 SYCP2Q9BX26 1530 aa33.71■■■□□ 2.99
NUMB-221ENST00000556600 CEP162Q5TB80 1403 aa33.7■■■□□ 2.98
NUMB-221ENST00000556600 MTUS2Q5JR59 1369 aa33.68■■■□□ 2.98
NUMB-221ENST00000556600 KIAA1107Q9UPP5 1409 aa33.65■■■□□ 2.98
NUMB-221ENST00000556600 CCNB3Q8WWL7 1395 aa33.65■■■□□ 2.98
NUMB-221ENST00000556600 HNRNPMP52272 730 aaKnown RBP eCLIP33.65■■■□□ 2.98
NUMB-221ENST00000556600 CFDP1Q9UEE9 299 aaPredicted RBP33.65■■■□□ 2.98
NUMB-221ENST00000556600 PREX1Q8TCU6 1659 aa33.61■■■□□ 2.97
NUMB-221ENST00000556600 PLEKHH2Q8IVE3 1493 aa33.6■■■□□ 2.97
NUMB-221ENST00000556600 SPAG9O60271 1321 aaKnown RBP33.59■■■□□ 2.97
NUMB-221ENST00000556600 FBXO41Q8TF61 875 aa33.59■■■□□ 2.97
NUMB-221ENST00000556600 EHBP1L1Q8N3D4 1523 aa33.58■■■□□ 2.97
NUMB-221ENST00000556600 TIAM1Q13009 1591 aa33.58■■■□□ 2.97
NUMB-221ENST00000556600 ATP7AQ04656 1500 aa33.55■■■□□ 2.96
NUMB-221ENST00000556600 INO80Q9ULG1 1556 aaPredicted RBP33.55■■■□□ 2.96
NUMB-221ENST00000556600 C3P01024 1663 aa33.55■■■□□ 2.96
NUMB-221ENST00000556600 ZNF644Q9H582 1327 aaPredicted RBP33.53■■■□□ 2.96
NUMB-221ENST00000556600 UHRF1BP1Q6BDS2 1440 aa33.52■■■□□ 2.96
NUMB-221ENST00000556600 PLXNC1O60486 1568 aa33.49■■■□□ 2.95
NUMB-221ENST00000556600 CNTLNQ9NXG0 1405 aa33.49■■■□□ 2.95
NUMB-221ENST00000556600 ESF1Q9H501 851 aaKnown RBP33.48■■■□□ 2.95
NUMB-221ENST00000556600 MBD5Q9P267 1494 aa33.48■■■□□ 2.95
NUMB-221ENST00000556600 SETD1BQ9UPS6 1966 aaKnown RBP33.47■■■□□ 2.95
NUMB-221ENST00000556600 A2MP01023 1474 aa33.45■■■□□ 2.95
NUMB-221ENST00000556600 SUPT6HQ7KZ85 1726 aaKnown RBP33.44■■■□□ 2.94
NUMB-221ENST00000556600 LOC105371045A0A1W2PR82 267 aa33.42■■■□□ 2.94
NUMB-221ENST00000556600 NCOA2Q15596 1464 aa33.41■■■□□ 2.94
NUMB-221ENST00000556600 STRCQ7RTU9 1775 aa33.41■■■□□ 2.94
NUMB-221ENST00000556600 MROH2AA6NES4 1674 aa33.38■■■□□ 2.93
NUMB-221ENST00000556600 ZMYM3Q14202 1370 aa33.37■■■□□ 2.93
NUMB-221ENST00000556600 VPS8Q8N3P4 1428 aa33.35■■■□□ 2.93
NUMB-221ENST00000556600 RTEL1-TNFRSF6BF6WH68 1400 aa33.34■■■□□ 2.93
NUMB-221ENST00000556600 NPATQ14207 1427 aa33.34■■■□□ 2.93
NUMB-221ENST00000556600 ADGBQ8N7X0 1667 aa33.33■■■□□ 2.93
NUMB-221ENST00000556600 CERKQ8TCT0 537 aa33.32■■■□□ 2.92
NUMB-221ENST00000556600 CAMSAP2Q08AD1 1489 aa33.31■■■□□ 2.92
NUMB-221ENST00000556600 GGT6Q6P531 493 aa33.29■■■□□ 2.92
NUMB-221ENST00000556600 DMRT2Q9Y5R5 561 aa33.29■■■□□ 2.92
NUMB-221ENST00000556600 CLTCQ00610 1675 aaKnown RBP33.29■■■□□ 2.92
NUMB-221ENST00000556600 CCDC141Q6ZP82 1450 aa33.28■■■□□ 2.92
NUMB-221ENST00000556600 LRRC9Q6ZRR7 1453 aa33.26■■■□□ 2.92
NUMB-221ENST00000556600 DHX29Q7Z478 1369 aaKnown RBP33.25■■■□□ 2.91
NUMB-221ENST00000556600 PTPRTO14522 1441 aa33.23■■■□□ 2.91
NUMB-221ENST00000556600 PTPRKQ15262 1439 aa33.23■■■□□ 2.91
NUMB-221ENST00000556600 NCOA1Q15788 1441 aa33.23■■■□□ 2.91
NUMB-221ENST00000556600 PPP6R1Q9UPN7 881 aa33.22■■■□□ 2.91
NUMB-221ENST00000556600 RSPH4AQ5TD94 716 aa33.19■■■□□ 2.9
NUMB-221ENST00000556600 ARHGEF5Q12774 1597 aa33.17■■■□□ 2.9
NUMB-221ENST00000556600 KANK4Q5T7N3 995 aaPredicted RBP33.17■■■□□ 2.9
NUMB-221ENST00000556600 MAP3K1Q13233 1512 aa33.17■■■□□ 2.9
NUMB-221ENST00000556600 CAMSAP1Q5T5Y3 1602 aa33.16■■■□□ 2.9
NUMB-221ENST00000556600 MYO3AQ8NEV4 1616 aa33.15■■■□□ 2.9
NUMB-221ENST00000556600 ZNF142P52746 1687 aaPredicted RBP33.12■■■□□ 2.89
NUMB-221ENST00000556600 KIF3BO15066 747 aa33.11■■■□□ 2.89
NUMB-221ENST00000556600 CEP170BQ9Y4F5 1589 aaPredicted RBP33.09■■■□□ 2.89
NUMB-221ENST00000556600 LTBP4Q8N2S1 1624 aa33.06■■■□□ 2.88
NUMB-221ENST00000556600 TSPY4P0CV99 314 aa33.05■■■□□ 2.88
NUMB-221ENST00000556600 TSPY10P0CW01 314 aa33.05■■■□□ 2.88
NUMB-221ENST00000556600 PLA2R1Q13018 1463 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms