RNA–Protein interactions for RNA: ENST00000556600.1

NUMB-221, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-221ENST00000556600 NISCHQ9Y2I1 1504 aa52.35■■■■■ 5.97
NUMB-221ENST00000556600 CCDC180Q9P1Z9 1646 aa46.87■■■■■ 5.09
NUMB-221ENST00000556600 ABCC9O60706 1549 aa46.78■■■■■ 5.08
NUMB-221ENST00000556600 RB1CC1Q8TDY2 1594 aa44.54■■■■■ 4.72
NUMB-221ENST00000556600 NACADO15069 1562 aa44.3■■■■■ 4.68
NUMB-221ENST00000556600 DCAF8L2P0C7V8 631 aa44.04■■■■■ 4.64
NUMB-221ENST00000556600 DNAJC5BQ9UF47 199 aa43.83■■■■■ 4.61
NUMB-221ENST00000556600 MYO15BQ96JP2 1530 aa43.78■■■■■ 4.6
NUMB-221ENST00000556600 PABPN1Q86U42 306 aaKnown RBP eCLIP43.58■■■■■ 4.57
NUMB-221ENST00000556600 UNC13AQ9UPW8 1703 aa43.53■■■■■ 4.56
NUMB-221ENST00000556600 ZCCHC6Q5VYS8 1495 aaKnown RBP43.44■■■■■ 4.54
NUMB-221ENST00000556600 BICRAQ9NZM4 1560 aa43.33■■■■■ 4.53
NUMB-221ENST00000556600 DCAF1Q9Y4B6 1507 aa43.25■■■■■ 4.51
NUMB-221ENST00000556600 SCRIBQ14160 1630 aa42.73■■■■■ 4.43
NUMB-221ENST00000556600 SHROOM4Q9ULL8 1493 aa42.71■■■■■ 4.43
NUMB-221ENST00000556600 CC2D2AQ9P2K1 1620 aa42.25■■■■■ 4.35
NUMB-221ENST00000556600 EIF4G1Q04637 1599 aaKnown RBP42.21■■■■■ 4.35
NUMB-221ENST00000556600 CECR2Q9BXF3 1484 aa42.12■■■■■ 4.33
NUMB-221ENST00000556600 NCAPD3P42695 1498 aa40.93■■■■■ 4.14
NUMB-221ENST00000556600 ATAD2BQ9ULI0 1458 aa40.83■■■■■ 4.13
NUMB-221ENST00000556600 SMARCA4P51532 1647 aa40.79■■■■■ 4.12
NUMB-221ENST00000556600 SMARCA2P51531 1590 aa40.67■■■■■ 4.1
NUMB-221ENST00000556600 HMGXB3Q12766 1538 aa40.62■■■■■ 4.09
NUMB-221ENST00000556600 BAZ1AQ9NRL2 1556 aaPredicted RBP40.6■■■■■ 4.09
NUMB-221ENST00000556600 PEG3Q9GZU2 1588 aa40.43■■■■■ 4.06
NUMB-221ENST00000556600 BAZ1BQ9UIG0 1483 aaKnown RBP40.39■■■■■ 4.06
NUMB-221ENST00000556600 MROH2BQ7Z745 1585 aa40.36■■■■■ 4.05
NUMB-221ENST00000556600 ERCC6Q03468 1493 aa40.32■■■■■ 4.05
NUMB-221ENST00000556600 NESP48681 1621 aa40.25■■■■■ 4.03
NUMB-221ENST00000556600 CUX2O14529 1486 aa40.25■■■■■ 4.03
NUMB-221ENST00000556600 DNAJC5Q9H3Z4 198 aa40.09■■■■■ 4.01
NUMB-221ENST00000556600 LAMC3Q9Y6N6 1575 aa39.93■■■■□ 3.98
NUMB-221ENST00000556600 WIZO95785 1651 aa39.84■■■■□ 3.97
NUMB-221ENST00000556600 THOC2Q8NI27 1593 aaKnown RBP39.8■■■■□ 3.96
NUMB-221ENST00000556600 PDS5BQ9NTI5 1447 aa39.7■■■■□ 3.95
NUMB-221ENST00000556600 CADPSQ9ULU8 1353 aa39.68■■■■□ 3.94
NUMB-221ENST00000556600 KIF21AQ7Z4S6 1674 aa39.67■■■■□ 3.94
NUMB-221ENST00000556600 RSF1Q96T23 1441 aaPredicted RBP39.57■■■■□ 3.93
NUMB-221ENST00000556600 MRC2Q9UBG0 1479 aa39.37■■■■□ 3.89
NUMB-221ENST00000556600 TOP2AP11388 1531 aaKnown RBP39.36■■■■□ 3.89
NUMB-221ENST00000556600 WDR62O43379 1518 aa39.3■■■■□ 3.88
NUMB-221ENST00000556600 CFTRP13569 1480 aa39.28■■■■□ 3.88
NUMB-221ENST00000556600 CEP164Q9UPV0 1460 aa39.23■■■■□ 3.87
NUMB-221ENST00000556600 FANCD2Q9BXW9 1451 aa39.22■■■■□ 3.87
NUMB-221ENST00000556600 CCDC88BA6NC98 1476 aa38.93■■■■□ 3.82
NUMB-221ENST00000556600 URB2Q14146 1524 aaKnown RBP38.92■■■■□ 3.82
NUMB-221ENST00000556600 PRDM2Q13029 1718 aa38.78■■■■□ 3.8
NUMB-221ENST00000556600 TOPBP1Q92547 1522 aa38.5■■■■□ 3.75
NUMB-221ENST00000556600 IFT140Q96RY7 1462 aa38.45■■■■□ 3.75
NUMB-221ENST00000556600 ZNF608Q9ULD9 1512 aaPredicted RBP38.43■■■■□ 3.74
NUMB-221ENST00000556600 OSCARQ8IYS5 282 aa38.41■■■■□ 3.74
NUMB-221ENST00000556600 ABCC8Q09428 1581 aa38.37■■■■□ 3.73
NUMB-221ENST00000556600 DNMBPQ6XZF7 1577 aa38.36■■■■□ 3.73
NUMB-221ENST00000556600 TRIM41Q8WV44 630 aa38.33■■■■□ 3.73
NUMB-221ENST00000556600 EIF4G3O43432 1585 aaKnown RBP38.18■■■■□ 3.7
NUMB-221ENST00000556600 TARBP1Q13395 1621 aaKnown RBP38.16■■■■□ 3.7
NUMB-221ENST00000556600 POLA1P09884 1462 aaPredicted RBP38.13■■■■□ 3.69
NUMB-221ENST00000556600 AQRO60306 1485 aaKnown RBP eCLIP38.07■■■■□ 3.68
NUMB-221ENST00000556600 RAD54L2Q9Y4B4 1467 aa37.99■■■■□ 3.67
NUMB-221ENST00000556600 SOGA1O94964 1423 aa37.93■■■■□ 3.66
NUMB-221ENST00000556600 RIMBP3CA6NJZ7 1639 aa37.91■■■■□ 3.66
NUMB-221ENST00000556600 RIMBP3BA6NNM3 1639 aa37.91■■■■□ 3.66
NUMB-221ENST00000556600 RIMBP3Q9UFD9 1639 aa37.91■■■■□ 3.66
NUMB-221ENST00000556600 CUX1P39880 1505 aa37.91■■■■□ 3.66
NUMB-221ENST00000556600 FGD5Q6ZNL6 1462 aa37.9■■■■□ 3.66
NUMB-221ENST00000556600 TDRD9Q8NDG6 1382 aaKnown RBP37.85■■■■□ 3.65
NUMB-221ENST00000556600 SUPT5HO00267 1087 aaKnown RBP37.85■■■■□ 3.65
NUMB-221ENST00000556600 ARHGEF11O15085 1522 aa37.83■■■■□ 3.65
NUMB-221ENST00000556600 CHD1O14646 1710 aa37.82■■■■□ 3.65
NUMB-221ENST00000556600 WDR97A6NE52 1622 aa37.73■■■■□ 3.63
NUMB-221ENST00000556600 FBLN2P98095 1184 aa37.72■■■■□ 3.63
NUMB-221ENST00000556600 SNAPC4Q5SXM2 1469 aa37.68■■■■□ 3.62
NUMB-221ENST00000556600 GRIN2BQ13224 1484 aa37.58■■■■□ 3.61
NUMB-221ENST00000556600 MAGI1Q96QZ7 1491 aaPredicted RBP37.58■■■■□ 3.61
NUMB-221ENST00000556600 CYB5RLQ6IPT4 315 aa37.51■■■■□ 3.6
NUMB-221ENST00000556600 ARAP1Q96P48 1450 aa37.5■■■■□ 3.59
NUMB-221ENST00000556600 ABCA10Q8WWZ4 1543 aa37.49■■■■□ 3.59
NUMB-221ENST00000556600 CHMP7Q8WUX9 453 aaPredicted RBP37.48■■■■□ 3.59
NUMB-221ENST00000556600 CLASP1Q7Z460 1538 aa37.47■■■■□ 3.59
NUMB-221ENST00000556600 GAPVD1Q14C86 1478 aa37.47■■■■□ 3.59
NUMB-221ENST00000556600 SYNJ2O15056 1496 aa37.45■■■■□ 3.59
NUMB-221ENST00000556600 ABCA5Q8WWZ7 1642 aa37.41■■■■□ 3.58
NUMB-221ENST00000556600 PBRM1Q86U86 1689 aa37.4■■■■□ 3.58
NUMB-221ENST00000556600 SYNJ1O43426 1573 aa37.39■■■■□ 3.58
NUMB-221ENST00000556600 WRNQ14191 1432 aaPredicted RBP eCLIP37.33■■■■□ 3.57
NUMB-221ENST00000556600 TOP2BQ02880 1626 aa37.3■■■■□ 3.56
NUMB-221ENST00000556600 BIVM-ERCC5R4GMW8 1640 aa37.29■■■■□ 3.56
NUMB-221ENST00000556600 ADAMTS12P58397 1594 aa37.12■■■■□ 3.53
NUMB-221ENST00000556600 GRIN2AQ12879 1464 aa37.11■■■■□ 3.53
NUMB-221ENST00000556600 NUP160Q12769 1436 aa37.02■■■■□ 3.52
NUMB-221ENST00000556600 FHAD1B1AJZ9 1412 aa37.01■■■■□ 3.51
NUMB-221ENST00000556600 CEP170Q5SW79 1584 aa37■■■■□ 3.51
NUMB-221ENST00000556600 TRHP20396 242 aaPredicted RBP36.99■■■■□ 3.51
NUMB-221ENST00000556600 ERICH3Q5RHP9 1530 aa36.99■■■■□ 3.51
NUMB-221ENST00000556600 ERCC6L2Q5T890 1561 aa36.91■■■■□ 3.5
NUMB-221ENST00000556600 SHROOM2Q13796 1616 aa36.81■■■■□ 3.48
NUMB-221ENST00000556600 PRG4Q92954 1404 aaPredicted RBP36.6■■■■□ 3.45
NUMB-221ENST00000556600 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
NUMB-221ENST00000556600 IGF1RP08069 1367 aa36.59■■■■□ 3.45
NUMB-221ENST00000556600 JPH4Q96JJ6 628 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms