RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 FBXO41Q8TF61 875 aa20.57■□□□□ 0.88
APEX1-213ENST00000556296 ZMYM4Q5VZL5 1548 aa20.57■□□□□ 0.88
APEX1-213ENST00000556296 MLECQ14165 292 aa20.56■□□□□ 0.88
APEX1-213ENST00000556296 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
APEX1-213ENST00000556296 MYT1LQ9UL68 1186 aa20.55■□□□□ 0.88
APEX1-213ENST00000556296 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
APEX1-213ENST00000556296 KIF14Q15058 1648 aa20.54■□□□□ 0.88
APEX1-213ENST00000556296 MADDQ8WXG6 1647 aa20.54■□□□□ 0.88
APEX1-213ENST00000556296 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
APEX1-213ENST00000556296 PCF11O94913 1555 aaKnown RBP20.53■□□□□ 0.88
APEX1-213ENST00000556296 YEATS2Q9ULM3 1422 aa20.53■□□□□ 0.88
APEX1-213ENST00000556296 CASKIN1Q8WXD9 1431 aa20.51■□□□□ 0.87
APEX1-213ENST00000556296 ATP10AO60312 1499 aa20.5■□□□□ 0.87
APEX1-213ENST00000556296 LMTK3Q96Q04 1460 aa20.49■□□□□ 0.87
APEX1-213ENST00000556296 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
APEX1-213ENST00000556296 CCDC18Q5T9S5 1454 aa20.47■□□□□ 0.87
APEX1-213ENST00000556296 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
APEX1-213ENST00000556296 SIGLEC1Q9BZZ2 1709 aa20.46■□□□□ 0.87
APEX1-213ENST00000556296 ARHGAP5Q13017 1502 aa20.46■□□□□ 0.87
APEX1-213ENST00000556296 HSPA2P54652 639 aa20.45■□□□□ 0.86
APEX1-213ENST00000556296 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
APEX1-213ENST00000556296 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
APEX1-213ENST00000556296 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
APEX1-213ENST00000556296 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
APEX1-213ENST00000556296 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
APEX1-213ENST00000556296 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
APEX1-213ENST00000556296 KDM5CP41229 1560 aa20.38■□□□□ 0.85
APEX1-213ENST00000556296 LOC105371045A0A1W2PR82 267 aa20.38■□□□□ 0.85
APEX1-213ENST00000556296 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
APEX1-213ENST00000556296 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
APEX1-213ENST00000556296 ARHGEF12Q9NZN5 1544 aa20.36■□□□□ 0.85
APEX1-213ENST00000556296 CEBPAP49715 358 aaPredicted RBP20.34■□□□□ 0.85
APEX1-213ENST00000556296 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
APEX1-213ENST00000556296 ABCC1P33527 1531 aa20.32■□□□□ 0.84
APEX1-213ENST00000556296 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
APEX1-213ENST00000556296 FER1L4A9Z1Z3 1794 aa20.31■□□□□ 0.84
APEX1-213ENST00000556296 ZNF777Q9ULD5 760 aaPredicted RBP20.31■□□□□ 0.84
APEX1-213ENST00000556296 CERKQ8TCT0 537 aa20.3■□□□□ 0.84
APEX1-213ENST00000556296 UHRF1BP1Q6BDS2 1440 aa20.29■□□□□ 0.84
APEX1-213ENST00000556296 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
APEX1-213ENST00000556296 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
APEX1-213ENST00000556296 REREQ9P2R6 1566 aa20.28■□□□□ 0.84
APEX1-213ENST00000556296 ABCA6Q8N139 1617 aa20.27■□□□□ 0.83
APEX1-213ENST00000556296 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
APEX1-213ENST00000556296 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
APEX1-213ENST00000556296 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
APEX1-213ENST00000556296 SPAG9O60271 1321 aaKnown RBP20.25■□□□□ 0.83
APEX1-213ENST00000556296 AGLP35573 1532 aa20.24■□□□□ 0.83
APEX1-213ENST00000556296 SAMD9LQ8IVG5 1584 aa20.24■□□□□ 0.83
APEX1-213ENST00000556296 KIDINS220Q9ULH0 1771 aa20.23■□□□□ 0.83
APEX1-213ENST00000556296 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
APEX1-213ENST00000556296 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
APEX1-213ENST00000556296 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
APEX1-213ENST00000556296 PLEKHH2Q8IVE3 1493 aa20.2■□□□□ 0.82
APEX1-213ENST00000556296 HNRNPMP52272 730 aaKnown RBP eCLIP20.2■□□□□ 0.82
APEX1-213ENST00000556296 PREX1Q8TCU6 1659 aa20.19■□□□□ 0.82
APEX1-213ENST00000556296 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
APEX1-213ENST00000556296 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
APEX1-213ENST00000556296 EHBP1L1Q8N3D4 1523 aa20.17■□□□□ 0.82
APEX1-213ENST00000556296 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
APEX1-213ENST00000556296 TIAM1Q13009 1591 aa20.14■□□□□ 0.81
APEX1-213ENST00000556296 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
APEX1-213ENST00000556296 PTPRTO14522 1441 aa20.13■□□□□ 0.81
APEX1-213ENST00000556296 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
APEX1-213ENST00000556296 NPATQ14207 1427 aa20.11■□□□□ 0.81
APEX1-213ENST00000556296 INO80Q9ULG1 1556 aaPredicted RBP20.11■□□□□ 0.81
APEX1-213ENST00000556296 GGT6Q6P531 493 aa20.1■□□□□ 0.81
APEX1-213ENST00000556296 ATP7AQ04656 1500 aa20.1■□□□□ 0.81
APEX1-213ENST00000556296 C3P01024 1663 aa20.1■□□□□ 0.81
APEX1-213ENST00000556296 A2MP01023 1474 aa20.08■□□□□ 0.81
APEX1-213ENST00000556296 PLXNC1O60486 1568 aa20.07■□□□□ 0.8
APEX1-213ENST00000556296 RSPH4AQ5TD94 716 aa20.06■□□□□ 0.8
APEX1-213ENST00000556296 MBD5Q9P267 1494 aa20.05■□□□□ 0.8
APEX1-213ENST00000556296 SUPT6HQ7KZ85 1726 aaKnown RBP20.05■□□□□ 0.8
APEX1-213ENST00000556296 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
APEX1-213ENST00000556296 NCOA1Q15788 1441 aa20.03■□□□□ 0.8
APEX1-213ENST00000556296 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
APEX1-213ENST00000556296 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
APEX1-213ENST00000556296 MROH2AA6NES4 1674 aa20.03■□□□□ 0.8
APEX1-213ENST00000556296 PKD2Q13563 968 aa20.02■□□□□ 0.8
APEX1-213ENST00000556296 ADGBQ8N7X0 1667 aa20.02■□□□□ 0.8
APEX1-213ENST00000556296 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.79
APEX1-213ENST00000556296 STRCQ7RTU9 1775 aa19.99■□□□□ 0.79
APEX1-213ENST00000556296 DHX29Q7Z478 1369 aaKnown RBP19.97■□□□□ 0.79
APEX1-213ENST00000556296 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
APEX1-213ENST00000556296 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
APEX1-213ENST00000556296 NCKAP5LQ9HCH0 1330 aa19.97■□□□□ 0.79
APEX1-213ENST00000556296 CAMSAP2Q08AD1 1489 aa19.96■□□□□ 0.79
APEX1-213ENST00000556296 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
APEX1-213ENST00000556296 MAP3K1Q13233 1512 aa19.96■□□□□ 0.79
APEX1-213ENST00000556296 CAMSAP1Q5T5Y3 1602 aa19.95■□□□□ 0.78
APEX1-213ENST00000556296 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
APEX1-213ENST00000556296 IQSEC2Q5JU85 1478 aa19.95■□□□□ 0.78
APEX1-213ENST00000556296 KIF3BO15066 747 aa19.95■□□□□ 0.78
APEX1-213ENST00000556296 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
APEX1-213ENST00000556296 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
APEX1-213ENST00000556296 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
APEX1-213ENST00000556296 ARHGEF5Q12774 1597 aa19.92■□□□□ 0.78
APEX1-213ENST00000556296 WASHC2CQ9Y4E1 1318 aa19.92■□□□□ 0.78
APEX1-213ENST00000556296 DISP3Q9P2K9 1392 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms