RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
PSEN1-215ENST00000556011 LRRC7Q96NW7 1537 aa15.38■□□□□ 0.05
PSEN1-215ENST00000556011 ARHGEF12Q9NZN5 1544 aa15.38■□□□□ 0.05
PSEN1-215ENST00000556011 RAPGEF6Q8TEU7 1601 aa15.37■□□□□ 0.05
PSEN1-215ENST00000556011 CPS1P31327 1500 aa15.36■□□□□ 0.05
PSEN1-215ENST00000556011 PHLDB1Q86UU1 1377 aa15.34■□□□□ 0.05
PSEN1-215ENST00000556011 AKNAQ7Z591 1439 aa15.32■□□□□ 0.04
PSEN1-215ENST00000556011 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
PSEN1-215ENST00000556011 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
PSEN1-215ENST00000556011 RXRBP28702 533 aa15.28■□□□□ 0.04
PSEN1-215ENST00000556011 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.04
PSEN1-215ENST00000556011 CAPN15O75808 1086 aa15.27■□□□□ 0.04
PSEN1-215ENST00000556011 C3P01024 1663 aa15.27■□□□□ 0.03
PSEN1-215ENST00000556011 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
PSEN1-215ENST00000556011 PKD2Q13563 968 aa15.24■□□□□ 0.03
PSEN1-215ENST00000556011 CDK12Q9NYV4 1490 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-215ENST00000556011 EP400Q96L91 3159 aa15.24■□□□□ 0.03
PSEN1-215ENST00000556011 ZNF772Q68DY9 489 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-215ENST00000556011 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
PSEN1-215ENST00000556011 TRAPPC8Q9Y2L5 1435 aa15.21■□□□□ 0.03
PSEN1-215ENST00000556011 CARMIL2Q6F5E8 1435 aa15.2■□□□□ 0.02
PSEN1-215ENST00000556011 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-215ENST00000556011 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-215ENST00000556011 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-215ENST00000556011 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-215ENST00000556011 NEO1Q92859 1461 aa15.19■□□□□ 0.02
PSEN1-215ENST00000556011 TCOF1Q13428 1488 aaKnown RBP15.18■□□□□ 0.02
PSEN1-215ENST00000556011 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
PSEN1-215ENST00000556011 ZNF784Q8NCA9 323 aaPredicted RBP15.16■□□□□ 0.02
PSEN1-215ENST00000556011 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
PSEN1-215ENST00000556011 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
PSEN1-215ENST00000556011 PLA2R1Q13018 1463 aa15.13■□□□□ 0.01
PSEN1-215ENST00000556011 RAPGEF2Q9Y4G8 1499 aa15.12■□□□□ 0.01
PSEN1-215ENST00000556011 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
PSEN1-215ENST00000556011 RGS12O14924 1447 aa15.11■□□□□ 0.01
PSEN1-215ENST00000556011 DENND4BO75064 1496 aaPredicted RBP15.1■□□□□ 0.01
PSEN1-215ENST00000556011 NHSL1Q5SYE7 1610 aa15.08■□□□□ 0
PSEN1-215ENST00000556011 FHOD3Q2V2M9 1422 aa15.08■□□□□ 0
PSEN1-215ENST00000556011 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
PSEN1-215ENST00000556011 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
PSEN1-215ENST00000556011 VWDEQ8N2E2 1590 aa15.06■□□□□ 0
PSEN1-215ENST00000556011 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
PSEN1-215ENST00000556011 MEX3CQ5U5Q3 659 aaKnown RBP15.05■□□□□ -0
PSEN1-215ENST00000556011 LRP6O75581 1613 aa15.04■□□□□ -0
PSEN1-215ENST00000556011 UTRNP46939 3433 aa15.02■□□□□ -0
PSEN1-215ENST00000556011 HRCP23327 699 aa15.01□□□□□ -0.01
PSEN1-215ENST00000556011 PRELPP51888 382 aa15□□□□□ -0.01
PSEN1-215ENST00000556011 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
PSEN1-215ENST00000556011 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
PSEN1-215ENST00000556011 STRCP1A6NGW2 1772 aa14.99□□□□□ -0.01
PSEN1-215ENST00000556011 MAGI2Q86UL8 1455 aa14.98□□□□□ -0.01
PSEN1-215ENST00000556011 PSDA5PKW4 1024 aaPredicted RBP14.98□□□□□ -0.01
PSEN1-215ENST00000556011 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
PSEN1-215ENST00000556011 ZNF142P52746 1687 aaPredicted RBP14.97□□□□□ -0.01
PSEN1-215ENST00000556011 ATP10AO60312 1499 aa14.97□□□□□ -0.01
PSEN1-215ENST00000556011 HECW1Q76N89 1606 aa14.97□□□□□ -0.01
PSEN1-215ENST00000556011 JCADQ9P266 1359 aa14.96□□□□□ -0.02
PSEN1-215ENST00000556011 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
PSEN1-215ENST00000556011 NEURL4Q96JN8 1562 aa14.94□□□□□ -0.02
PSEN1-215ENST00000556011 POLR1AO95602 1720 aaPredicted RBP14.94□□□□□ -0.02
PSEN1-215ENST00000556011 ROBO1Q9Y6N7 1651 aa14.93□□□□□ -0.02
PSEN1-215ENST00000556011 CEP170BQ9Y4F5 1589 aaPredicted RBP14.91□□□□□ -0.02
PSEN1-215ENST00000556011 CCDC125Q86Z20 511 aa14.91□□□□□ -0.02
PSEN1-215ENST00000556011 ESF1Q9H501 851 aaKnown RBP14.91□□□□□ -0.02
PSEN1-215ENST00000556011 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
PSEN1-215ENST00000556011 ABCA8O94911 1581 aa14.9□□□□□ -0.02
PSEN1-215ENST00000556011 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
PSEN1-215ENST00000556011 RBM6P78332 1123 aaKnown RBP14.89□□□□□ -0.03
PSEN1-215ENST00000556011 NPATQ14207 1427 aa14.89□□□□□ -0.03
PSEN1-215ENST00000556011 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
PSEN1-215ENST00000556011 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
PSEN1-215ENST00000556011 SYNMO15061 1565 aa14.87□□□□□ -0.03
PSEN1-215ENST00000556011 BCL9LQ86UU0 1499 aa14.87□□□□□ -0.03
PSEN1-215ENST00000556011 AFF2P51816 1311 aa14.85□□□□□ -0.03
PSEN1-215ENST00000556011 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
PSEN1-215ENST00000556011 COL13A1Q5TAT6 717 aaPredicted RBP14.84□□□□□ -0.03
PSEN1-215ENST00000556011 XIRP1Q702N8 1843 aaKnown RBP14.84□□□□□ -0.03
PSEN1-215ENST00000556011 DEFB132Q7Z7B7 95 aa14.83□□□□□ -0.04
PSEN1-215ENST00000556011 SPATA31A6Q5VVP1 1343 aa14.83□□□□□ -0.04
PSEN1-215ENST00000556011 QTRT2Q9H974 415 aaKnown RBP14.82□□□□□ -0.04
PSEN1-215ENST00000556011 IQGAP2Q13576 1575 aa14.81□□□□□ -0.04
PSEN1-215ENST00000556011 ARID3CA6NKF2 412 aa14.79□□□□□ -0.04
PSEN1-215ENST00000556011 GIGYF1O75420 1035 aaPredicted RBP14.78□□□□□ -0.04
PSEN1-215ENST00000556011 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.04
PSEN1-215ENST00000556011 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
PSEN1-215ENST00000556011 TNS4Q8IZW8 715 aa14.77□□□□□ -0.05
PSEN1-215ENST00000556011 KDM5CP41229 1560 aa14.76□□□□□ -0.05
PSEN1-215ENST00000556011 DNMT1P26358 1616 aaKnown RBP14.75□□□□□ -0.05
PSEN1-215ENST00000556011 CNTLNQ9NXG0 1405 aa14.73□□□□□ -0.05
PSEN1-215ENST00000556011 COL16A1Q07092 1604 aaPredicted RBP14.73□□□□□ -0.05
PSEN1-215ENST00000556011 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
PSEN1-215ENST00000556011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
PSEN1-215ENST00000556011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.72□□□□□ -0.05
PSEN1-215ENST00000556011 NGLY1Q96IV0 654 aa14.71□□□□□ -0.05
PSEN1-215ENST00000556011 ZMYM3Q14202 1370 aa14.71□□□□□ -0.06
PSEN1-215ENST00000556011 AGLP35573 1532 aa14.71□□□□□ -0.06
PSEN1-215ENST00000556011 MROH2AA6NES4 1674 aa14.71□□□□□ -0.06
PSEN1-215ENST00000556011 CHD4Q14839 1912 aa14.68□□□□□ -0.06
PSEN1-215ENST00000556011 NPHP4O75161 1426 aaPredicted RBP14.68□□□□□ -0.06
PSEN1-215ENST00000556011 BLMP54132 1417 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms