RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 ZFYVE16Q7Z3T8 1539 aa29.15■■■□□ 2.26
NPC2-208ENST00000556009 YEATS2Q9ULM3 1422 aa29.13■■■□□ 2.25
NPC2-208ENST00000556009 MAGI2Q86UL8 1455 aa29.1■■■□□ 2.25
NPC2-208ENST00000556009 POGZQ7Z3K3 1410 aa29.09■■■□□ 2.25
NPC2-208ENST00000556009 EFCAB2Q5VUJ9 269 aa29.08■■■□□ 2.25
NPC2-208ENST00000556009 SCAPERQ9BY12 1400 aa29.07■■■□□ 2.24
NPC2-208ENST00000556009 PCF11O94913 1555 aaKnown RBP29.05■■■□□ 2.24
NPC2-208ENST00000556009 FER1L4A9Z1Z3 1794 aa29.05■■■□□ 2.24
NPC2-208ENST00000556009 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
NPC2-208ENST00000556009 LMTK3Q96Q04 1460 aa29.03■■■□□ 2.24
NPC2-208ENST00000556009 CDC42BPBQ9Y5S2 1711 aa29.03■■■□□ 2.24
NPC2-208ENST00000556009 CLIP1P30622 1438 aa28.98■■■□□ 2.23
NPC2-208ENST00000556009 ARHGAP5Q13017 1502 aa28.96■■■□□ 2.23
NPC2-208ENST00000556009 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
NPC2-208ENST00000556009 KDM5CP41229 1560 aa28.94■■■□□ 2.22
NPC2-208ENST00000556009 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
NPC2-208ENST00000556009 ATP10AO60312 1499 aa28.91■■■□□ 2.22
NPC2-208ENST00000556009 ARHGEF12Q9NZN5 1544 aa28.9■■■□□ 2.22
NPC2-208ENST00000556009 C9orf84Q5VXU9 1444 aa28.9■■■□□ 2.22
NPC2-208ENST00000556009 ZNF518AQ6AHZ1 1483 aa28.9■■■□□ 2.22
NPC2-208ENST00000556009 CDC42BPAQ5VT25 1732 aa28.89■■■□□ 2.22
NPC2-208ENST00000556009 MLECQ14165 292 aa28.89■■■□□ 2.22
NPC2-208ENST00000556009 CCDC18Q5T9S5 1454 aa28.89■■■□□ 2.22
NPC2-208ENST00000556009 ITSN2Q9NZM3 1697 aa28.87■■■□□ 2.21
NPC2-208ENST00000556009 PLPPR3Q6T4P5 718 aa28.87■■■□□ 2.21
NPC2-208ENST00000556009 DIP2CQ9Y2E4 1556 aa28.87■■■□□ 2.21
NPC2-208ENST00000556009 AFAP1Q8N556 730 aa28.86■■■□□ 2.21
NPC2-208ENST00000556009 ABCA6Q8N139 1617 aa28.85■■■□□ 2.21
NPC2-208ENST00000556009 ABCC1P33527 1531 aa28.84■■■□□ 2.21
NPC2-208ENST00000556009 FYCO1Q9BQS8 1478 aa28.8■■■□□ 2.2
NPC2-208ENST00000556009 HSPA2P54652 639 aa28.8■■■□□ 2.2
NPC2-208ENST00000556009 PREX1Q8TCU6 1659 aa28.79■■■□□ 2.2
NPC2-208ENST00000556009 REREQ9P2R6 1566 aa28.79■■■□□ 2.2
NPC2-208ENST00000556009 KIDINS220Q9ULH0 1771 aa28.76■■■□□ 2.19
NPC2-208ENST00000556009 MLH3Q9UHC1 1453 aa28.76■■■□□ 2.19
NPC2-208ENST00000556009 TRAPPC8Q9Y2L5 1435 aa28.76■■■□□ 2.19
NPC2-208ENST00000556009 MYT1LQ9UL68 1186 aa28.73■■■□□ 2.19
NPC2-208ENST00000556009 SAMD9LQ8IVG5 1584 aa28.71■■■□□ 2.19
NPC2-208ENST00000556009 FBXO41Q8TF61 875 aa28.71■■■□□ 2.19
NPC2-208ENST00000556009 C3P01024 1663 aa28.7■■■□□ 2.18
NPC2-208ENST00000556009 CEBPAP49715 358 aaPredicted RBP28.67■■■□□ 2.18
NPC2-208ENST00000556009 AGLP35573 1532 aa28.65■■■□□ 2.18
NPC2-208ENST00000556009 SYCP2Q9BX26 1530 aa28.64■■■□□ 2.18
NPC2-208ENST00000556009 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.17
NPC2-208ENST00000556009 STRCQ7RTU9 1775 aa28.63■■■□□ 2.17
NPC2-208ENST00000556009 GPATCH8Q9UKJ3 1502 aaKnown RBP28.63■■■□□ 2.17
NPC2-208ENST00000556009 ZNF777Q9ULD5 760 aaPredicted RBP28.59■■■□□ 2.17
NPC2-208ENST00000556009 SUPT6HQ7KZ85 1726 aaKnown RBP28.57■■■□□ 2.16
NPC2-208ENST00000556009 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
NPC2-208ENST00000556009 CFDP1Q9UEE9 299 aaPredicted RBP28.55■■■□□ 2.16
NPC2-208ENST00000556009 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
NPC2-208ENST00000556009 HNRNPMP52272 730 aaKnown RBP eCLIP28.54■■■□□ 2.16
NPC2-208ENST00000556009 MTUS2Q5JR59 1369 aa28.53■■■□□ 2.16
NPC2-208ENST00000556009 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
NPC2-208ENST00000556009 SPAG9O60271 1321 aaKnown RBP28.53■■■□□ 2.16
NPC2-208ENST00000556009 UHRF1BP1Q6BDS2 1440 aa28.52■■■□□ 2.16
NPC2-208ENST00000556009 ESF1Q9H501 851 aaKnown RBP28.52■■■□□ 2.16
NPC2-208ENST00000556009 PLEKHH2Q8IVE3 1493 aa28.52■■■□□ 2.16
NPC2-208ENST00000556009 ATP7AQ04656 1500 aa28.51■■■□□ 2.15
NPC2-208ENST00000556009 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
NPC2-208ENST00000556009 MROH2AA6NES4 1674 aa28.5■■■□□ 2.15
NPC2-208ENST00000556009 PLXNC1O60486 1568 aa28.48■■■□□ 2.15
NPC2-208ENST00000556009 CNTLNQ9NXG0 1405 aa28.47■■■□□ 2.15
NPC2-208ENST00000556009 EHBP1L1Q8N3D4 1523 aa28.45■■■□□ 2.15
NPC2-208ENST00000556009 DMRT2Q9Y5R5 561 aa28.45■■■□□ 2.14
NPC2-208ENST00000556009 CLTCQ00610 1675 aaKnown RBP28.45■■■□□ 2.14
NPC2-208ENST00000556009 CEP162Q5TB80 1403 aa28.43■■■□□ 2.14
NPC2-208ENST00000556009 CERKQ8TCT0 537 aa28.42■■■□□ 2.14
NPC2-208ENST00000556009 ADGBQ8N7X0 1667 aa28.42■■■□□ 2.14
NPC2-208ENST00000556009 A2MP01023 1474 aa28.38■■■□□ 2.13
NPC2-208ENST00000556009 ZNF644Q9H582 1327 aaPredicted RBP28.37■■■□□ 2.13
NPC2-208ENST00000556009 ZMYM3Q14202 1370 aa28.35■■■□□ 2.13
NPC2-208ENST00000556009 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
NPC2-208ENST00000556009 NPATQ14207 1427 aa28.34■■■□□ 2.13
NPC2-208ENST00000556009 PPP6R1Q9UPN7 881 aa28.32■■■□□ 2.12
NPC2-208ENST00000556009 MYO3AQ8NEV4 1616 aa28.32■■■□□ 2.12
NPC2-208ENST00000556009 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
NPC2-208ENST00000556009 RTEL1-TNFRSF6BF6WH68 1400 aa28.3■■■□□ 2.12
NPC2-208ENST00000556009 PTPRTO14522 1441 aa28.3■■■□□ 2.12
NPC2-208ENST00000556009 NCOA1Q15788 1441 aa28.29■■■□□ 2.12
NPC2-208ENST00000556009 CAMSAP1Q5T5Y3 1602 aa28.29■■■□□ 2.12
NPC2-208ENST00000556009 RSPH4AQ5TD94 716 aa28.27■■■□□ 2.12
NPC2-208ENST00000556009 GGT6Q6P531 493 aa28.27■■■□□ 2.12
NPC2-208ENST00000556009 NCOA2Q15596 1464 aa28.26■■■□□ 2.11
NPC2-208ENST00000556009 LTBP4Q8N2S1 1624 aa28.24■■■□□ 2.11
NPC2-208ENST00000556009 CAMSAP2Q08AD1 1489 aa28.23■■■□□ 2.11
NPC2-208ENST00000556009 PTPRKQ15262 1439 aa28.23■■■□□ 2.11
NPC2-208ENST00000556009 DHX29Q7Z478 1369 aaKnown RBP28.23■■■□□ 2.11
NPC2-208ENST00000556009 CEP170BQ9Y4F5 1589 aaPredicted RBP28.21■■■□□ 2.11
NPC2-208ENST00000556009 LOC105371045A0A1W2PR82 267 aa28.19■■■□□ 2.1
NPC2-208ENST00000556009 CCDC141Q6ZP82 1450 aa28.19■■■□□ 2.1
NPC2-208ENST00000556009 VPS8Q8N3P4 1428 aa28.17■■■□□ 2.1
NPC2-208ENST00000556009 ARHGEF5Q12774 1597 aa28.14■■■□□ 2.1
NPC2-208ENST00000556009 LRRC9Q6ZRR7 1453 aa28.12■■■□□ 2.09
NPC2-208ENST00000556009 PLA2R1Q13018 1463 aa28.11■■■□□ 2.09
NPC2-208ENST00000556009 KIF3BO15066 747 aa28.11■■■□□ 2.09
NPC2-208ENST00000556009 TSPY4P0CV99 314 aa28.1■■■□□ 2.09
NPC2-208ENST00000556009 TSPY10P0CW01 314 aa28.1■■■□□ 2.09
NPC2-208ENST00000556009 NCKAP5LQ9HCH0 1330 aa28.1■■■□□ 2.09
NPC2-208ENST00000556009 DNMT1P26358 1616 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms