RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
IFT43-211ENST00000555677 ARHGAP5Q13017 1502 aa24.13■■□□□ 1.45
IFT43-211ENST00000555677 PREX2Q70Z35 1606 aa24.11■■□□□ 1.45
IFT43-211ENST00000555677 ZMYM4Q5VZL5 1548 aa24.08■■□□□ 1.45
IFT43-211ENST00000555677 POGZQ7Z3K3 1410 aa24.06■■□□□ 1.44
IFT43-211ENST00000555677 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
IFT43-211ENST00000555677 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
IFT43-211ENST00000555677 MAGI2Q86UL8 1455 aa24.02■■□□□ 1.44
IFT43-211ENST00000555677 ZFYVE16Q7Z3T8 1539 aa24.02■■□□□ 1.44
IFT43-211ENST00000555677 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
IFT43-211ENST00000555677 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
IFT43-211ENST00000555677 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
IFT43-211ENST00000555677 VPS8Q8N3P4 1428 aa24■■□□□ 1.43
IFT43-211ENST00000555677 BCORL1Q5H9F3 1711 aa23.99■■□□□ 1.43
IFT43-211ENST00000555677 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
IFT43-211ENST00000555677 ZNF518AQ6AHZ1 1483 aa23.99■■□□□ 1.43
IFT43-211ENST00000555677 ADAMTSL3P82987 1691 aa23.99■■□□□ 1.43
IFT43-211ENST00000555677 ITSN2Q9NZM3 1697 aa23.99■■□□□ 1.43
IFT43-211ENST00000555677 ARID4BQ4LE39 1312 aaPredicted RBP23.98■■□□□ 1.43
IFT43-211ENST00000555677 ARHGEF12Q9NZN5 1544 aa23.98■■□□□ 1.43
IFT43-211ENST00000555677 ABCC1P33527 1531 aa23.97■■□□□ 1.43
IFT43-211ENST00000555677 KDM5CP41229 1560 aa23.97■■□□□ 1.43
IFT43-211ENST00000555677 EHBP1L1Q8N3D4 1523 aa23.97■■□□□ 1.43
IFT43-211ENST00000555677 ZNF777Q9ULD5 760 aaPredicted RBP23.96■■□□□ 1.43
IFT43-211ENST00000555677 SAMD9LQ8IVG5 1584 aa23.95■■□□□ 1.43
IFT43-211ENST00000555677 CCNB3Q8WWL7 1395 aa23.95■■□□□ 1.42
IFT43-211ENST00000555677 TIAM1Q13009 1591 aa23.95■■□□□ 1.42
IFT43-211ENST00000555677 TRAPPC8Q9Y2L5 1435 aa23.93■■□□□ 1.42
IFT43-211ENST00000555677 CFDP1Q9UEE9 299 aaPredicted RBP23.92■■□□□ 1.42
IFT43-211ENST00000555677 ATP10AO60312 1499 aa23.92■■□□□ 1.42
IFT43-211ENST00000555677 HECW2Q9P2P5 1572 aa23.91■■□□□ 1.42
IFT43-211ENST00000555677 SUPT6HQ7KZ85 1726 aaKnown RBP23.9■■□□□ 1.42
IFT43-211ENST00000555677 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.41
IFT43-211ENST00000555677 MADDQ8WXG6 1647 aa23.88■■□□□ 1.41
IFT43-211ENST00000555677 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
IFT43-211ENST00000555677 MLH3Q9UHC1 1453 aa23.87■■□□□ 1.41
IFT43-211ENST00000555677 SYCP2Q9BX26 1530 aa23.87■■□□□ 1.41
IFT43-211ENST00000555677 C9orf84Q5VXU9 1444 aa23.86■■□□□ 1.41
IFT43-211ENST00000555677 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
IFT43-211ENST00000555677 PTPRMP28827 1452 aa23.85■■□□□ 1.41
IFT43-211ENST00000555677 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
IFT43-211ENST00000555677 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
IFT43-211ENST00000555677 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
IFT43-211ENST00000555677 NCOA2Q15596 1464 aa23.84■■□□□ 1.41
IFT43-211ENST00000555677 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
IFT43-211ENST00000555677 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
IFT43-211ENST00000555677 RIMS1Q86UR5 1692 aaKnown RBP23.83■■□□□ 1.41
IFT43-211ENST00000555677 ZNF644Q9H582 1327 aaPredicted RBP23.83■■□□□ 1.4
IFT43-211ENST00000555677 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
IFT43-211ENST00000555677 MLECQ14165 292 aa23.82■■□□□ 1.4
IFT43-211ENST00000555677 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
IFT43-211ENST00000555677 FER1L4A9Z1Z3 1794 aa23.79■■□□□ 1.4
IFT43-211ENST00000555677 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
IFT43-211ENST00000555677 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
IFT43-211ENST00000555677 MBD5Q9P267 1494 aa23.75■■□□□ 1.39
IFT43-211ENST00000555677 ATP7AQ04656 1500 aa23.73■■□□□ 1.39
IFT43-211ENST00000555677 INO80Q9ULG1 1556 aaPredicted RBP23.73■■□□□ 1.39
IFT43-211ENST00000555677 APLP2Q06481 763 aa23.72■■□□□ 1.39
IFT43-211ENST00000555677 AGLP35573 1532 aa23.71■■□□□ 1.39
IFT43-211ENST00000555677 CAMSAP2Q08AD1 1489 aa23.7■■□□□ 1.38
IFT43-211ENST00000555677 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
IFT43-211ENST00000555677 ADGBQ8N7X0 1667 aa23.65■■□□□ 1.38
IFT43-211ENST00000555677 RSPH4AQ5TD94 716 aa23.65■■□□□ 1.38
IFT43-211ENST00000555677 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
IFT43-211ENST00000555677 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
IFT43-211ENST00000555677 A2MP01023 1474 aa23.62■■□□□ 1.37
IFT43-211ENST00000555677 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
IFT43-211ENST00000555677 PLXNC1O60486 1568 aa23.61■■□□□ 1.37
IFT43-211ENST00000555677 ARHGEF5Q12774 1597 aa23.61■■□□□ 1.37
IFT43-211ENST00000555677 MIA2Q96PC5 1412 aa23.6■■□□□ 1.37
IFT43-211ENST00000555677 CEBPAP49715 358 aaPredicted RBP23.6■■□□□ 1.37
IFT43-211ENST00000555677 C3P01024 1663 aa23.57■■□□□ 1.36
IFT43-211ENST00000555677 TSPY4P0CV99 314 aa23.56■■□□□ 1.36
IFT43-211ENST00000555677 TSPY10P0CW01 314 aa23.56■■□□□ 1.36
IFT43-211ENST00000555677 ESF1Q9H501 851 aaKnown RBP23.56■■□□□ 1.36
IFT43-211ENST00000555677 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
IFT43-211ENST00000555677 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
IFT43-211ENST00000555677 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
IFT43-211ENST00000555677 PTPN23Q9H3S7 1636 aa23.52■■□□□ 1.36
IFT43-211ENST00000555677 GGT6Q6P531 493 aa23.51■■□□□ 1.35
IFT43-211ENST00000555677 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
IFT43-211ENST00000555677 CLTCQ00610 1675 aaKnown RBP23.51■■□□□ 1.35
IFT43-211ENST00000555677 PREX1Q8TCU6 1659 aa23.51■■□□□ 1.35
IFT43-211ENST00000555677 MAST1Q9Y2H9 1570 aa23.49■■□□□ 1.35
IFT43-211ENST00000555677 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
IFT43-211ENST00000555677 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
IFT43-211ENST00000555677 ZMYM3Q14202 1370 aa23.45■■□□□ 1.34
IFT43-211ENST00000555677 KIF3BO15066 747 aa23.45■■□□□ 1.34
IFT43-211ENST00000555677 HSPA2P54652 639 aa23.45■■□□□ 1.34
IFT43-211ENST00000555677 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
IFT43-211ENST00000555677 PPP6R1Q9UPN7 881 aa23.44■■□□□ 1.34
IFT43-211ENST00000555677 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
IFT43-211ENST00000555677 ABCC5O15440 1437 aa23.41■■□□□ 1.34
IFT43-211ENST00000555677 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
IFT43-211ENST00000555677 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
IFT43-211ENST00000555677 DAPK1P53355 1430 aa23.37■■□□□ 1.33
IFT43-211ENST00000555677 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
IFT43-211ENST00000555677 NPATQ14207 1427 aa23.34■■□□□ 1.33
IFT43-211ENST00000555677 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
IFT43-211ENST00000555677 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms