RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 LAS1LQ9Y4W2 734 aaKnown RBP23.1■■□□□ 1.29
PPP4R3A-208ENST00000555462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
PPP4R3A-208ENST00000555462 PKD2Q13563 968 aa23.07■■□□□ 1.28
PPP4R3A-208ENST00000555462 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
PPP4R3A-208ENST00000555462 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
PPP4R3A-208ENST00000555462 PLIN1O60240 522 aa23.04■■□□□ 1.28
PPP4R3A-208ENST00000555462 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
PPP4R3A-208ENST00000555462 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
PPP4R3A-208ENST00000555462 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
PPP4R3A-208ENST00000555462 ANP32AP39687 249 aaKnown RBP23.03■■□□□ 1.28
PPP4R3A-208ENST00000555462 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
PPP4R3A-208ENST00000555462 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
PPP4R3A-208ENST00000555462 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
PPP4R3A-208ENST00000555462 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
PPP4R3A-208ENST00000555462 EFCAB5A4FU69 1503 aa23■■□□□ 1.27
PPP4R3A-208ENST00000555462 ZBTB47Q9UFB7 747 aaPredicted RBP23■■□□□ 1.27
PPP4R3A-208ENST00000555462 CFDP1Q9UEE9 299 aaPredicted RBP23■■□□□ 1.27
PPP4R3A-208ENST00000555462 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
PPP4R3A-208ENST00000555462 ST20-MTHFSA0A0A6YYL1 179 aa22.98■■□□□ 1.27
PPP4R3A-208ENST00000555462 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
PPP4R3A-208ENST00000555462 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
PPP4R3A-208ENST00000555462 ANKRD30BQ9BXX2 1392 aa22.97■■□□□ 1.27
PPP4R3A-208ENST00000555462 DCAF11Q8TEB1 546 aa22.96■■□□□ 1.27
PPP4R3A-208ENST00000555462 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
PPP4R3A-208ENST00000555462 CDCA7LQ96GN5 454 aa22.96■■□□□ 1.27
PPP4R3A-208ENST00000555462 DNMBPQ6XZF7 1577 aa22.95■■□□□ 1.27
PPP4R3A-208ENST00000555462 USP47Q96K76 1375 aa22.95■■□□□ 1.26
PPP4R3A-208ENST00000555462 CC2D1BQ5T0F9 858 aaKnown RBP22.95■■□□□ 1.26
PPP4R3A-208ENST00000555462 SUPT6HQ7KZ85 1726 aaKnown RBP22.93■■□□□ 1.26
PPP4R3A-208ENST00000555462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.262e-6■□□□□ 9.7
PPP4R3A-208ENST00000555462 SLC4A3P48751 1232 aa22.9■■□□□ 1.26
PPP4R3A-208ENST00000555462 PNISRQ8TF01 805 aaKnown RBP22.9■■□□□ 1.26
PPP4R3A-208ENST00000555462 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.25
PPP4R3A-208ENST00000555462 ERICH6BQ5W0A0 696 aa22.89■■□□□ 1.25
PPP4R3A-208ENST00000555462 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
PPP4R3A-208ENST00000555462 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
PPP4R3A-208ENST00000555462 CTTNBP2Q8WZ74 1663 aa22.88■■□□□ 1.25
PPP4R3A-208ENST00000555462 EPRSP07814 1512 aaKnown RBP22.88■■□□□ 1.25
PPP4R3A-208ENST00000555462 EHBP1L1Q8N3D4 1523 aa22.86■■□□□ 1.25
PPP4R3A-208ENST00000555462 IL27Q8NEV9 243 aa22.86■■□□□ 1.25
PPP4R3A-208ENST00000555462 ABCC5O15440 1437 aa22.84■■□□□ 1.25
PPP4R3A-208ENST00000555462 DHX29Q7Z478 1369 aaKnown RBP22.84■■□□□ 1.25
PPP4R3A-208ENST00000555462 PRG4Q92954 1404 aaPredicted RBP22.83■■□□□ 1.24
PPP4R3A-208ENST00000555462 DAPK1P53355 1430 aa22.82■■□□□ 1.24
PPP4R3A-208ENST00000555462 RPRD2Q5VT52 1461 aaKnown RBP22.81■■□□□ 1.24
PPP4R3A-208ENST00000555462 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
PPP4R3A-208ENST00000555462 HNRNPMP52272 730 aaKnown RBP eCLIP22.8■■□□□ 1.24
PPP4R3A-208ENST00000555462 RCAN3Q9UKA8 241 aa22.8■■□□□ 1.24
PPP4R3A-208ENST00000555462 NUP155O75694 1391 aa22.8■■□□□ 1.24
PPP4R3A-208ENST00000555462 NEFMP07197 916 aa22.79■■□□□ 1.24
PPP4R3A-208ENST00000555462 NBPF1Q3BBV0 1214 aa22.79■■□□□ 1.24
PPP4R3A-208ENST00000555462 SPATA31E1Q6ZUB1 1445 aa22.78■■□□□ 1.24
PPP4R3A-208ENST00000555462 CUL7Q14999 1698 aa22.77■■□□□ 1.24
PPP4R3A-208ENST00000555462 SMG6Q86US8 1419 aaKnown RBP22.77■■□□□ 1.24
PPP4R3A-208ENST00000555462 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
PPP4R3A-208ENST00000555462 RRP1P56182 461 aaKnown RBP22.77■■□□□ 1.24
PPP4R3A-208ENST00000555462 TEX14Q8IWB6 1497 aa22.76■■□□□ 1.23
PPP4R3A-208ENST00000555462 PDE4AP27815 886 aa22.75■■□□□ 1.23
PPP4R3A-208ENST00000555462 SAMD9Q5K651 1589 aa22.73■■□□□ 1.23
PPP4R3A-208ENST00000555462 C20orf194Q5TEA3 1177 aa22.72■■□□□ 1.23
PPP4R3A-208ENST00000555462 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.71■■□□□ 1.23
PPP4R3A-208ENST00000555462 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.23
PPP4R3A-208ENST00000555462 CRBNQ96SW2 442 aa22.69■■□□□ 1.22
PPP4R3A-208ENST00000555462 CHMP7Q8WUX9 453 aaPredicted RBP22.69■■□□□ 1.22
PPP4R3A-208ENST00000555462 HECW1Q76N89 1606 aa22.67■■□□□ 1.22
PPP4R3A-208ENST00000555462 TCOF1Q13428 1488 aaKnown RBP22.67■■□□□ 1.22
PPP4R3A-208ENST00000555462 BCORL1Q5H9F3 1711 aa22.67■■□□□ 1.22
PPP4R3A-208ENST00000555462 TSPY4P0CV99 314 aa22.66■■□□□ 1.22
PPP4R3A-208ENST00000555462 TSPY10P0CW01 314 aa22.66■■□□□ 1.22
PPP4R3A-208ENST00000555462 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
PPP4R3A-208ENST00000555462 RGS3P49796 1198 aa22.65■■□□□ 1.22
PPP4R3A-208ENST00000555462 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
PPP4R3A-208ENST00000555462 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
PPP4R3A-208ENST00000555462 PZPP20742 1482 aa22.64■■□□□ 1.21
PPP4R3A-208ENST00000555462 MYBBP1AQ9BQG0 1328 aaKnown RBP22.64■■□□□ 1.21
PPP4R3A-208ENST00000555462 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
PPP4R3A-208ENST00000555462 PANK3Q9H999 370 aa22.62■■□□□ 1.21
PPP4R3A-208ENST00000555462 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
PPP4R3A-208ENST00000555462 SENP3Q9H4L4 574 aaPredicted RBP22.61■■□□□ 1.21
PPP4R3A-208ENST00000555462 GCC2Q8IWJ2 1684 aa22.6■■□□□ 1.21
PPP4R3A-208ENST00000555462 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
PPP4R3A-208ENST00000555462 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
PPP4R3A-208ENST00000555462 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
PPP4R3A-208ENST00000555462 CCDC146Q8IYE0 955 aa22.59■■□□□ 1.21
PPP4R3A-208ENST00000555462 RNF123Q5XPI4 1314 aa22.59■■□□□ 1.21
PPP4R3A-208ENST00000555462 IQGAP2Q13576 1575 aa22.58■■□□□ 1.21
PPP4R3A-208ENST00000555462 ANKRD50Q9ULJ7 1429 aa22.58■■□□□ 1.21
PPP4R3A-208ENST00000555462 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
PPP4R3A-208ENST00000555462 NUP153P49790 1475 aaKnown RBP22.56■■□□□ 1.2
PPP4R3A-208ENST00000555462 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
PPP4R3A-208ENST00000555462 BACH2Q9BYV9 841 aa22.55■■□□□ 1.2
PPP4R3A-208ENST00000555462 ARXQ96QS3 562 aa22.55■■□□□ 1.2
PPP4R3A-208ENST00000555462 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
PPP4R3A-208ENST00000555462 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
PPP4R3A-208ENST00000555462 ADAMTS8Q9UP79 889 aa22.54■■□□□ 1.2
PPP4R3A-208ENST00000555462 BRPF3Q9ULD4 1205 aa22.53■■□□□ 1.2
PPP4R3A-208ENST00000555462 ROCK1Q13464 1354 aa22.53■■□□□ 1.2
PPP4R3A-208ENST00000555462 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
PPP4R3A-208ENST00000555462 DAXXQ9UER7 740 aaPredicted RBP22.53■■□□□ 1.2
PPP4R3A-208ENST00000555462 RALBP1Q15311 655 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms