RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ARHGAP5Q13017 1502 aa21.85■■□□□ 1.09
SNX6-203ENST00000555416 VPS8Q8N3P4 1428 aa21.84■■□□□ 1.09
SNX6-203ENST00000555416 PREX2Q70Z35 1606 aa21.83■■□□□ 1.08
SNX6-203ENST00000555416 CDC42BPAQ5VT25 1732 aa21.82■■□□□ 1.08
SNX6-203ENST00000555416 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
SNX6-203ENST00000555416 POGZQ7Z3K3 1410 aa21.8■■□□□ 1.08
SNX6-203ENST00000555416 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
SNX6-203ENST00000555416 ZMYM4Q5VZL5 1548 aa21.78■■□□□ 1.08
SNX6-203ENST00000555416 ARHGEF12Q9NZN5 1544 aa21.77■■□□□ 1.08
SNX6-203ENST00000555416 YEATS2Q9ULM3 1422 aa21.77■■□□□ 1.08
SNX6-203ENST00000555416 EHBP1L1Q8N3D4 1523 aa21.76■■□□□ 1.07
SNX6-203ENST00000555416 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
SNX6-203ENST00000555416 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
SNX6-203ENST00000555416 AFAP1Q8N556 730 aa21.74■■□□□ 1.07
SNX6-203ENST00000555416 ABCC1P33527 1531 aa21.73■■□□□ 1.07
SNX6-203ENST00000555416 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
SNX6-203ENST00000555416 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
SNX6-203ENST00000555416 ZFYVE16Q7Z3T8 1539 aa21.71■■□□□ 1.07
SNX6-203ENST00000555416 SAMD9LQ8IVG5 1584 aa21.71■■□□□ 1.07
SNX6-203ENST00000555416 ZNF777Q9ULD5 760 aaPredicted RBP21.71■■□□□ 1.07
SNX6-203ENST00000555416 SIGLEC1Q9BZZ2 1709 aa21.71■■□□□ 1.07
SNX6-203ENST00000555416 KANK4Q5T7N3 995 aaPredicted RBP21.69■■□□□ 1.06
SNX6-203ENST00000555416 ZNF518AQ6AHZ1 1483 aa21.69■■□□□ 1.06
SNX6-203ENST00000555416 KDM5CP41229 1560 aa21.69■■□□□ 1.06
SNX6-203ENST00000555416 MAGI2Q86UL8 1455 aa21.68■■□□□ 1.06
SNX6-203ENST00000555416 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
SNX6-203ENST00000555416 NCOA2Q15596 1464 aa21.67■■□□□ 1.06
SNX6-203ENST00000555416 LRRC9Q6ZRR7 1453 aa21.67■■□□□ 1.06
SNX6-203ENST00000555416 CFDP1Q9UEE9 299 aaPredicted RBP21.67■■□□□ 1.06
SNX6-203ENST00000555416 ZNF644Q9H582 1327 aaPredicted RBP21.66■■□□□ 1.06
SNX6-203ENST00000555416 HNRNPMP52272 730 aaKnown RBP eCLIP21.65■■□□□ 1.06
SNX6-203ENST00000555416 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
SNX6-203ENST00000555416 SUPT6HQ7KZ85 1726 aaKnown RBP21.64■■□□□ 1.06
SNX6-203ENST00000555416 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
SNX6-203ENST00000555416 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
SNX6-203ENST00000555416 ADAMTSL3P82987 1691 aa21.62■■□□□ 1.05
SNX6-203ENST00000555416 HECW2Q9P2P5 1572 aa21.61■■□□□ 1.05
SNX6-203ENST00000555416 BCORL1Q5H9F3 1711 aa21.61■■□□□ 1.05
SNX6-203ENST00000555416 ATP10AO60312 1499 aa21.61■■□□□ 1.05
SNX6-203ENST00000555416 MLH3Q9UHC1 1453 aa21.6■■□□□ 1.05
SNX6-203ENST00000555416 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
SNX6-203ENST00000555416 DIP2CQ9Y2E4 1556 aa21.59■■□□□ 1.05
SNX6-203ENST00000555416 ABCA6Q8N139 1617 aa21.58■■□□□ 1.05
SNX6-203ENST00000555416 C9orf84Q5VXU9 1444 aa21.57■■□□□ 1.04
SNX6-203ENST00000555416 KIDINS220Q9ULH0 1771 aa21.57■■□□□ 1.04
SNX6-203ENST00000555416 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
SNX6-203ENST00000555416 PLEKHH2Q8IVE3 1493 aa21.56■■□□□ 1.04
SNX6-203ENST00000555416 MADDQ8WXG6 1647 aa21.55■■□□□ 1.04
SNX6-203ENST00000555416 MBD5Q9P267 1494 aa21.55■■□□□ 1.04
SNX6-203ENST00000555416 MLECQ14165 292 aa21.54■■□□□ 1.04
SNX6-203ENST00000555416 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.03
SNX6-203ENST00000555416 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.03
SNX6-203ENST00000555416 PTPRMP28827 1452 aa21.51■■□□□ 1.03
SNX6-203ENST00000555416 INO80Q9ULG1 1556 aaPredicted RBP21.49■■□□□ 1.03
SNX6-203ENST00000555416 APLP2Q06481 763 aa21.49■■□□□ 1.03
SNX6-203ENST00000555416 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
SNX6-203ENST00000555416 ATP7AQ04656 1500 aa21.48■■□□□ 1.03
SNX6-203ENST00000555416 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
SNX6-203ENST00000555416 MYOM3Q5VTT5 1437 aa21.46■■□□□ 1.03
SNX6-203ENST00000555416 AGLP35573 1532 aa21.43■■□□□ 1.02
SNX6-203ENST00000555416 CCDC141Q6ZP82 1450 aa21.42■■□□□ 1.02
SNX6-203ENST00000555416 FER1L4A9Z1Z3 1794 aa21.41■■□□□ 1.02
SNX6-203ENST00000555416 MIA2Q96PC5 1412 aa21.4■■□□□ 1.02
SNX6-203ENST00000555416 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
SNX6-203ENST00000555416 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
SNX6-203ENST00000555416 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
SNX6-203ENST00000555416 A2MP01023 1474 aa21.39■■□□□ 1.01
SNX6-203ENST00000555416 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
SNX6-203ENST00000555416 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
SNX6-203ENST00000555416 ADGBQ8N7X0 1667 aa21.34■■□□□ 1.01
SNX6-203ENST00000555416 CEBPAP49715 358 aaPredicted RBP21.34■■□□□ 1.01
SNX6-203ENST00000555416 RSPH4AQ5TD94 716 aa21.34■■□□□ 1.01
SNX6-203ENST00000555416 FGD6Q6ZV73 1430 aa21.34■■□□□ 1.01
SNX6-203ENST00000555416 PTPN23Q9H3S7 1636 aa21.33■■□□□ 1.01
SNX6-203ENST00000555416 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
SNX6-203ENST00000555416 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
SNX6-203ENST00000555416 TCOF1Q13428 1488 aaKnown RBP21.3■■□□□ 1
SNX6-203ENST00000555416 TSPY4P0CV99 314 aa21.29■■□□□ 1
SNX6-203ENST00000555416 TSPY10P0CW01 314 aa21.29■■□□□ 1
SNX6-203ENST00000555416 ABCC5O15440 1437 aa21.29■■□□□ 1
SNX6-203ENST00000555416 MAST1Q9Y2H9 1570 aa21.28■■□□□ 1
SNX6-203ENST00000555416 LMTK3Q96Q04 1460 aa21.26■□□□□ 0.99
SNX6-203ENST00000555416 GGT6Q6P531 493 aa21.26■□□□□ 0.99
SNX6-203ENST00000555416 C3P01024 1663 aa21.24■□□□□ 0.99
SNX6-203ENST00000555416 DAPK1P53355 1430 aa21.23■□□□□ 0.99
SNX6-203ENST00000555416 KIF3BO15066 747 aa21.23■□□□□ 0.99
SNX6-203ENST00000555416 CROCC2H7BZ55 1655 aa21.23■□□□□ 0.99
SNX6-203ENST00000555416 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
SNX6-203ENST00000555416 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
SNX6-203ENST00000555416 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
SNX6-203ENST00000555416 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
SNX6-203ENST00000555416 SHANK2Q9UPX8 1470 aa21.2■□□□□ 0.98
SNX6-203ENST00000555416 HSPA2P54652 639 aa21.19■□□□□ 0.98
SNX6-203ENST00000555416 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
SNX6-203ENST00000555416 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
SNX6-203ENST00000555416 MROH2AA6NES4 1674 aa21.18■□□□□ 0.98
SNX6-203ENST00000555416 CHIC2Q9UKJ5 165 aa21.17■□□□□ 0.98
SNX6-203ENST00000555416 RRP7BPQ9NSQ0 103 aa21.16■□□□□ 0.98
SNX6-203ENST00000555416 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
SNX6-203ENST00000555416 PREX1Q8TCU6 1659 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms