RNA–Protein interactions for RNA: ENST00000555359.1

NSFL1C-211, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-211ENST00000555359 ZFYVE16Q7Z3T8 1539 aa34.32■■■■□ 3.08
NSFL1C-211ENST00000555359 KIF14Q15058 1648 aa34.32■■■■□ 3.08
NSFL1C-211ENST00000555359 ZMYM4Q5VZL5 1548 aa34.31■■■■□ 3.08
NSFL1C-211ENST00000555359 POGZQ7Z3K3 1410 aa34.3■■■■□ 3.08
NSFL1C-211ENST00000555359 MAGI2Q86UL8 1455 aa34.27■■■■□ 3.08
NSFL1C-211ENST00000555359 CLIP1P30622 1438 aa34.27■■■■□ 3.08
NSFL1C-211ENST00000555359 LRRIQ1Q96JM4 1722 aa34.27■■■■□ 3.08
NSFL1C-211ENST00000555359 MYO5CQ9NQX4 1742 aa34.26■■■■□ 3.07
NSFL1C-211ENST00000555359 AFAP1Q8N556 730 aa34.24■■■■□ 3.07
NSFL1C-211ENST00000555359 RIMS1Q86UR5 1692 aaKnown RBP34.24■■■■□ 3.07
NSFL1C-211ENST00000555359 SIGLEC1Q9BZZ2 1709 aa34.23■■■■□ 3.07
NSFL1C-211ENST00000555359 CASKIN1Q8WXD9 1431 aa34.21■■■■□ 3.07
NSFL1C-211ENST00000555359 ARHGAP5Q13017 1502 aa34.21■■■■□ 3.07
NSFL1C-211ENST00000555359 MYT1LQ9UL68 1186 aa34.2■■■■□ 3.07
NSFL1C-211ENST00000555359 ATP10AO60312 1499 aa34.17■■■■□ 3.06
NSFL1C-211ENST00000555359 PCF11O94913 1555 aaKnown RBP34.16■■■■□ 3.06
NSFL1C-211ENST00000555359 CCDC18Q5T9S5 1454 aa34.12■■■■□ 3.05
NSFL1C-211ENST00000555359 LMTK3Q96Q04 1460 aa34.11■■■■□ 3.05
NSFL1C-211ENST00000555359 HSPA2P54652 639 aa34.1■■■■□ 3.05
NSFL1C-211ENST00000555359 ZNF518AQ6AHZ1 1483 aa34.09■■■■□ 3.05
NSFL1C-211ENST00000555359 C9orf84Q5VXU9 1444 aa34.09■■■■□ 3.05
NSFL1C-211ENST00000555359 CDC42BPBQ9Y5S2 1711 aa34.07■■■■□ 3.04
NSFL1C-211ENST00000555359 CEBPAP49715 358 aaPredicted RBP34.03■■■■□ 3.04
NSFL1C-211ENST00000555359 FYCO1Q9BQS8 1478 aa34.02■■■■□ 3.04
NSFL1C-211ENST00000555359 ZNF777Q9ULD5 760 aaPredicted RBP34.02■■■■□ 3.04
NSFL1C-211ENST00000555359 ARHGEF12Q9NZN5 1544 aa34.01■■■■□ 3.04
NSFL1C-211ENST00000555359 TRAPPC8Q9Y2L5 1435 aa34.01■■■■□ 3.03
NSFL1C-211ENST00000555359 FER1L4A9Z1Z3 1794 aa34■■■■□ 3.03
NSFL1C-211ENST00000555359 KDM5CP41229 1560 aa33.99■■■■□ 3.03
NSFL1C-211ENST00000555359 PREX2Q70Z35 1606 aa33.97■■■■□ 3.03
NSFL1C-211ENST00000555359 MLH3Q9UHC1 1453 aa33.93■■■■□ 3.02
NSFL1C-211ENST00000555359 ABCC1P33527 1531 aa33.93■■■■□ 3.02
NSFL1C-211ENST00000555359 DIP2CQ9Y2E4 1556 aa33.92■■■■□ 3.02
NSFL1C-211ENST00000555359 CDC42BPAQ5VT25 1732 aa33.9■■■■□ 3.02
NSFL1C-211ENST00000555359 HNRNPMP52272 730 aaKnown RBP eCLIP33.89■■■■□ 3.02
NSFL1C-211ENST00000555359 FBXO41Q8TF61 875 aa33.89■■■■□ 3.02
NSFL1C-211ENST00000555359 GPATCH8Q9UKJ3 1502 aaKnown RBP33.87■■■■□ 3.01
NSFL1C-211ENST00000555359 ITSN2Q9NZM3 1697 aa33.87■■■■□ 3.01
NSFL1C-211ENST00000555359 ABCA6Q8N139 1617 aa33.86■■■■□ 3.01
NSFL1C-211ENST00000555359 CFDP1Q9UEE9 299 aaPredicted RBP33.84■■■■□ 3.01
NSFL1C-211ENST00000555359 ESF1Q9H501 851 aaKnown RBP33.82■■■■□ 3
NSFL1C-211ENST00000555359 MTUS2Q5JR59 1369 aa33.8■■■■□ 3
NSFL1C-211ENST00000555359 CCNB3Q8WWL7 1395 aa33.8■■■■□ 3
NSFL1C-211ENST00000555359 SAMD9LQ8IVG5 1584 aa33.79■■■■□ 3
NSFL1C-211ENST00000555359 REREQ9P2R6 1566 aa33.79■■■■□ 3
NSFL1C-211ENST00000555359 SPAG9O60271 1321 aaKnown RBP33.79■■■■□ 3
NSFL1C-211ENST00000555359 KIDINS220Q9ULH0 1771 aa33.78■■■■□ 3
NSFL1C-211ENST00000555359 SYCP2Q9BX26 1530 aa33.76■■■■□ 3
NSFL1C-211ENST00000555359 AGLP35573 1532 aa33.74■■■□□ 2.99
NSFL1C-211ENST00000555359 CEP162Q5TB80 1403 aa33.7■■■□□ 2.99
NSFL1C-211ENST00000555359 ZNF644Q9H582 1327 aaPredicted RBP33.7■■■□□ 2.99
NSFL1C-211ENST00000555359 PREX1Q8TCU6 1659 aa33.7■■■□□ 2.99
NSFL1C-211ENST00000555359 KIAA1107Q9UPP5 1409 aa33.68■■■□□ 2.98
NSFL1C-211ENST00000555359 UHRF1BP1Q6BDS2 1440 aa33.67■■■□□ 2.98
NSFL1C-211ENST00000555359 SETD1BQ9UPS6 1966 aaKnown RBP33.65■■■□□ 2.98
NSFL1C-211ENST00000555359 PLEKHH2Q8IVE3 1493 aa33.64■■■□□ 2.98
NSFL1C-211ENST00000555359 C3P01024 1663 aa33.64■■■□□ 2.98
NSFL1C-211ENST00000555359 LOC105371045A0A1W2PR82 267 aa33.63■■■□□ 2.97
NSFL1C-211ENST00000555359 CERKQ8TCT0 537 aa33.62■■■□□ 2.97
NSFL1C-211ENST00000555359 ATP7AQ04656 1500 aa33.58■■■□□ 2.97
NSFL1C-211ENST00000555359 SUPT6HQ7KZ85 1726 aaKnown RBP33.58■■■□□ 2.97
NSFL1C-211ENST00000555359 CNTLNQ9NXG0 1405 aa33.57■■■□□ 2.96
NSFL1C-211ENST00000555359 GGT6Q6P531 493 aa33.57■■■□□ 2.96
NSFL1C-211ENST00000555359 DMRT2Q9Y5R5 561 aa33.57■■■□□ 2.96
NSFL1C-211ENST00000555359 TIAM1Q13009 1591 aa33.56■■■□□ 2.96
NSFL1C-211ENST00000555359 EHBP1L1Q8N3D4 1523 aa33.56■■■□□ 2.96
NSFL1C-211ENST00000555359 ZMYM3Q14202 1370 aa33.55■■■□□ 2.96
NSFL1C-211ENST00000555359 A2MP01023 1474 aa33.55■■■□□ 2.96
NSFL1C-211ENST00000555359 STRCQ7RTU9 1775 aa33.53■■■□□ 2.96
NSFL1C-211ENST00000555359 INO80Q9ULG1 1556 aaPredicted RBP33.51■■■□□ 2.95
NSFL1C-211ENST00000555359 MBD5Q9P267 1494 aa33.5■■■□□ 2.95
NSFL1C-211ENST00000555359 NCOA2Q15596 1464 aa33.44■■■□□ 2.94
NSFL1C-211ENST00000555359 PLXNC1O60486 1568 aa33.44■■■□□ 2.94
NSFL1C-211ENST00000555359 CLTCQ00610 1675 aaKnown RBP33.41■■■□□ 2.94
NSFL1C-211ENST00000555359 NPATQ14207 1427 aa33.4■■■□□ 2.94
NSFL1C-211ENST00000555359 MROH2AA6NES4 1674 aa33.39■■■□□ 2.94
NSFL1C-211ENST00000555359 RTEL1-TNFRSF6BF6WH68 1400 aa33.37■■■□□ 2.93
NSFL1C-211ENST00000555359 PTPRTO14522 1441 aa33.36■■■□□ 2.93
NSFL1C-211ENST00000555359 DHX29Q7Z478 1369 aaKnown RBP33.36■■■□□ 2.93
NSFL1C-211ENST00000555359 ADGBQ8N7X0 1667 aa33.36■■■□□ 2.93
NSFL1C-211ENST00000555359 PPP6R1Q9UPN7 881 aa33.35■■■□□ 2.93
NSFL1C-211ENST00000555359 CAMSAP2Q08AD1 1489 aa33.34■■■□□ 2.93
NSFL1C-211ENST00000555359 KIF3BO15066 747 aa33.34■■■□□ 2.93
NSFL1C-211ENST00000555359 NCKAP5LQ9HCH0 1330 aa33.33■■■□□ 2.93
NSFL1C-211ENST00000555359 RSPH4AQ5TD94 716 aa33.33■■■□□ 2.93
NSFL1C-211ENST00000555359 NCOA1Q15788 1441 aa33.33■■■□□ 2.93
NSFL1C-211ENST00000555359 VPS8Q8N3P4 1428 aa33.33■■■□□ 2.93
NSFL1C-211ENST00000555359 PTPRKQ15262 1439 aa33.32■■■□□ 2.92
NSFL1C-211ENST00000555359 CCDC141Q6ZP82 1450 aa33.31■■■□□ 2.92
NSFL1C-211ENST00000555359 KANK4Q5T7N3 995 aaPredicted RBP33.3■■■□□ 2.92
NSFL1C-211ENST00000555359 CAMSAP1Q5T5Y3 1602 aa33.3■■■□□ 2.92
NSFL1C-211ENST00000555359 TSPY4P0CV99 314 aa33.28■■■□□ 2.92
NSFL1C-211ENST00000555359 TSPY10P0CW01 314 aa33.28■■■□□ 2.92
NSFL1C-211ENST00000555359 LRRC9Q6ZRR7 1453 aa33.27■■■□□ 2.92
NSFL1C-211ENST00000555359 FBXO31Q5XUX0 539 aaPredicted RBP33.23■■■□□ 2.91
NSFL1C-211ENST00000555359 WASHC2CQ9Y4E1 1318 aa33.2■■■□□ 2.91
NSFL1C-211ENST00000555359 MYO3AQ8NEV4 1616 aa33.19■■■□□ 2.9
NSFL1C-211ENST00000555359 PKD2Q13563 968 aa33.16■■■□□ 2.9
NSFL1C-211ENST00000555359 LTBP4Q8N2S1 1624 aa33.15■■■□□ 2.9
NSFL1C-211ENST00000555359 CEP170BQ9Y4F5 1589 aaPredicted RBP33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms