RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 CFDP1Q9UEE9 299 aaPredicted RBP35.81■■■■□ 3.32
RCCD1-203ENST00000555155 ZNF644Q9H582 1327 aaPredicted RBP35.81■■■■□ 3.32
RCCD1-203ENST00000555155 ABCA9Q8IUA7 1624 aa35.8■■■■□ 3.32
RCCD1-203ENST00000555155 RAB3GAP2Q9H2M9 1393 aa35.76■■■■□ 3.31
RCCD1-203ENST00000555155 PREX2Q70Z35 1606 aa35.76■■■■□ 3.31
RCCD1-203ENST00000555155 MYO5CQ9NQX4 1742 aa35.75■■■■□ 3.31
RCCD1-203ENST00000555155 CDC42BPBQ9Y5S2 1711 aa35.75■■■■□ 3.31
RCCD1-203ENST00000555155 SETD5Q9C0A6 1442 aa35.74■■■■□ 3.31
RCCD1-203ENST00000555155 ZNF777Q9ULD5 760 aaPredicted RBP35.74■■■■□ 3.31
RCCD1-203ENST00000555155 PLCH2O75038 1416 aa35.73■■■■□ 3.31
RCCD1-203ENST00000555155 CAMSAP2Q08AD1 1489 aa35.71■■■■□ 3.31
RCCD1-203ENST00000555155 DIP2BQ9P265 1576 aa35.7■■■■□ 3.31
RCCD1-203ENST00000555155 ARHGAP5Q13017 1502 aa35.69■■■■□ 3.3
RCCD1-203ENST00000555155 CHIC2Q9UKJ5 165 aa35.69■■■■□ 3.3
RCCD1-203ENST00000555155 FAM69CQ0P6D2 419 aa35.68■■■■□ 3.3
RCCD1-203ENST00000555155 CD109Q6YHK3 1445 aa35.66■■■■□ 3.3
RCCD1-203ENST00000555155 GLI2P10070 1586 aa35.64■■■■□ 3.3
RCCD1-203ENST00000555155 DNMT1P26358 1616 aaKnown RBP35.64■■■■□ 3.3
RCCD1-203ENST00000555155 DHX57Q6P158 1386 aaKnown RBP35.63■■■■□ 3.29
RCCD1-203ENST00000555155 DAPK1P53355 1430 aa35.62■■■■□ 3.29
RCCD1-203ENST00000555155 SAMD9LQ8IVG5 1584 aa35.6■■■■□ 3.29
RCCD1-203ENST00000555155 ARAP3Q8WWN8 1544 aa35.6■■■■□ 3.29
RCCD1-203ENST00000555155 EFCAB2Q5VUJ9 269 aa35.59■■■■□ 3.29
RCCD1-203ENST00000555155 ABCC5O15440 1437 aa35.59■■■■□ 3.29
RCCD1-203ENST00000555155 HFM1A2PYH4 1435 aa35.58■■■■□ 3.29
RCCD1-203ENST00000555155 RRP7BPQ9NSQ0 103 aa35.58■■■■□ 3.29
RCCD1-203ENST00000555155 MAP3K4Q9Y6R4 1608 aa35.58■■■■□ 3.29
RCCD1-203ENST00000555155 FANCAO15360 1455 aa35.56■■■■□ 3.28
RCCD1-203ENST00000555155 NAIPQ13075 1403 aa35.54■■■■□ 3.28
RCCD1-203ENST00000555155 KIF13AQ9H1H9 1805 aa35.54■■■■□ 3.28
RCCD1-203ENST00000555155 HNRNPMP52272 730 aaKnown RBP eCLIP35.51■■■■□ 3.288e-13■■■□□ 16.5
RCCD1-203ENST00000555155 GCC2Q8IWJ2 1684 aa35.49■■■■□ 3.27
RCCD1-203ENST00000555155 CROCC2H7BZ55 1655 aa35.48■■■■□ 3.27
RCCD1-203ENST00000555155 SYCP2Q9BX26 1530 aa35.47■■■■□ 3.27
RCCD1-203ENST00000555155 MBD5Q9P267 1494 aa35.47■■■■□ 3.27
RCCD1-203ENST00000555155 ARHGEF12Q9NZN5 1544 aa35.46■■■■□ 3.27
RCCD1-203ENST00000555155 ABCC1P33527 1531 aa35.44■■■■□ 3.26
RCCD1-203ENST00000555155 KIAA1107Q9UPP5 1409 aa35.43■■■■□ 3.26
RCCD1-203ENST00000555155 PLEKHH2Q8IVE3 1493 aa35.43■■■■□ 3.26
RCCD1-203ENST00000555155 AKNAQ7Z591 1439 aa35.42■■■■□ 3.26
RCCD1-203ENST00000555155 TSPOAP1O95153 1857 aa35.42■■■■□ 3.26
RCCD1-203ENST00000555155 KDM6BO15054 1643 aa35.41■■■■□ 3.26
RCCD1-203ENST00000555155 ADGBQ8N7X0 1667 aa35.39■■■■□ 3.26
RCCD1-203ENST00000555155 ADGRL1O94910 1474 aa35.39■■■■□ 3.26
RCCD1-203ENST00000555155 PPRC1Q5VV67 1664 aaKnown RBP35.38■■■■□ 3.25
RCCD1-203ENST00000555155 ROCK1Q13464 1354 aa35.38■■■■□ 3.25
RCCD1-203ENST00000555155 ARHGEF5Q12774 1597 aa35.38■■■■□ 3.25
RCCD1-203ENST00000555155 CFAP74Q9C0B2 1584 aa35.37■■■■□ 3.25
RCCD1-203ENST00000555155 TRHP20396 242 aaPredicted RBP35.36■■■■□ 3.25
RCCD1-203ENST00000555155 NEO1Q92859 1461 aa35.35■■■■□ 3.25
RCCD1-203ENST00000555155 SCAPERQ9BY12 1400 aa35.35■■■■□ 3.25
RCCD1-203ENST00000555155 CCDC141Q6ZP82 1450 aa35.34■■■■□ 3.25
RCCD1-203ENST00000555155 TRAPPC8Q9Y2L5 1435 aa35.34■■■■□ 3.25
RCCD1-203ENST00000555155 RSPH4AQ5TD94 716 aa35.31■■■■□ 3.24
RCCD1-203ENST00000555155 CLSPNQ9HAW4 1339 aa35.3■■■■□ 3.24
RCCD1-203ENST00000555155 C9orf84Q5VXU9 1444 aa35.29■■■■□ 3.24
RCCD1-203ENST00000555155 AFAP1Q8N556 730 aa35.29■■■■□ 3.24
RCCD1-203ENST00000555155 TSPY4P0CV99 314 aa35.28■■■■□ 3.24
RCCD1-203ENST00000555155 TSPY10P0CW01 314 aa35.28■■■■□ 3.24
RCCD1-203ENST00000555155 TEX14Q8IWB6 1497 aa35.27■■■■□ 3.24
RCCD1-203ENST00000555155 SHANK2Q9UPX8 1470 aa35.27■■■■□ 3.24
RCCD1-203ENST00000555155 NCOA1Q15788 1441 aa35.27■■■■□ 3.24
RCCD1-203ENST00000555155 ADGRL2O95490 1459 aa35.27■■■■□ 3.24
RCCD1-203ENST00000555155 ANKRD30AQ9BXX3 1397 aa35.23■■■■□ 3.23
RCCD1-203ENST00000555155 TRIM52Q96A61 297 aa35.21■■■■□ 3.23
RCCD1-203ENST00000555155 POGZQ7Z3K3 1410 aa35.19■■■■□ 3.22
RCCD1-203ENST00000555155 RAPGEF3O95398 923 aa35.18■■■■□ 3.22
RCCD1-203ENST00000555155 DENND4BO75064 1496 aaPredicted RBP35.17■■■■□ 3.22
RCCD1-203ENST00000555155 ZNF518AQ6AHZ1 1483 aa35.16■■■■□ 3.22
RCCD1-203ENST00000555155 MAST1Q9Y2H9 1570 aa35.15■■■■□ 3.22
RCCD1-203ENST00000555155 SPAG9O60271 1321 aaKnown RBP35.14■■■■□ 3.22
RCCD1-203ENST00000555155 KIF15Q9NS87 1388 aa35.09■■■■□ 3.21
RCCD1-203ENST00000555155 ZFYVE16Q7Z3T8 1539 aa35.08■■■■□ 3.21
RCCD1-203ENST00000555155 KDM5CP41229 1560 aa35.08■■■■□ 3.21
RCCD1-203ENST00000555155 RICTORQ6R327 1708 aa35.08■■■■□ 3.21
RCCD1-203ENST00000555155 COL17A1Q9UMD9 1497 aaPredicted RBP35.07■■■■□ 3.21
RCCD1-203ENST00000555155 ANKRD50Q9ULJ7 1429 aa35.07■■■■□ 3.2
RCCD1-203ENST00000555155 SIN3AQ96ST3 1273 aa35.07■■■■□ 3.2
RCCD1-203ENST00000555155 RTEL1-TNFRSF6BF6WH68 1400 aa35.06■■■■□ 3.2
RCCD1-203ENST00000555155 FRMPD1Q5SYB0 1578 aa35.05■■■■□ 3.2
RCCD1-203ENST00000555155 INO80Q9ULG1 1556 aaPredicted RBP35.05■■■■□ 3.2
RCCD1-203ENST00000555155 ATP7AQ04656 1500 aa35.04■■■■□ 3.2
RCCD1-203ENST00000555155 MYT1LQ9UL68 1186 aa35.04■■■■□ 3.2
RCCD1-203ENST00000555155 NEUROD1Q13562 356 aa35.03■■■■□ 3.2
RCCD1-203ENST00000555155 PLXNC1O60486 1568 aa35.02■■■■□ 3.2
RCCD1-203ENST00000555155 MPHOSPH9Q99550 1183 aa35■■■■□ 3.19
RCCD1-203ENST00000555155 KIDINS220Q9ULH0 1771 aa35■■■■□ 3.19
RCCD1-203ENST00000555155 MLH3Q9UHC1 1453 aa34.99■■■■□ 3.19
RCCD1-203ENST00000555155 HECW2Q9P2P5 1572 aa34.98■■■■□ 3.19
RCCD1-203ENST00000555155 FOXD1Q16676 465 aa34.92■■■■□ 3.18
RCCD1-203ENST00000555155 ZMYM4Q5VZL5 1548 aa34.91■■■■□ 3.18
RCCD1-203ENST00000555155 PZPP20742 1482 aa34.9■■■■□ 3.18
RCCD1-203ENST00000555155 SLC4A1APQ9BWU0 796 aaKnown RBP34.9■■■■□ 3.18
RCCD1-203ENST00000555155 DUOX2Q9NRD8 1548 aa34.9■■■■□ 3.18
RCCD1-203ENST00000555155 ACIN1Q9UKV3 1341 aaKnown RBP34.89■■■■□ 3.18
RCCD1-203ENST00000555155 YEATS2Q9ULM3 1422 aa34.88■■■■□ 3.17
RCCD1-203ENST00000555155 ABCA6Q8N139 1617 aa34.87■■■■□ 3.17
RCCD1-203ENST00000555155 NUP155O75694 1391 aa34.83■■■■□ 3.17
RCCD1-203ENST00000555155 DIP2CQ9Y2E4 1556 aa34.82■■■■□ 3.16
RCCD1-203ENST00000555155 ERBINQ96RT1 1412 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms