RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
PCNX1-209ENST00000554879 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
PCNX1-209ENST00000554879 ANP32CO43423 234 aa23.05■■□□□ 1.28
PCNX1-209ENST00000554879 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
PCNX1-209ENST00000554879 NEFLP07196 543 aa23.05■■□□□ 1.28
PCNX1-209ENST00000554879 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
PCNX1-209ENST00000554879 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
PCNX1-209ENST00000554879 NUP155O75694 1391 aa23.03■■□□□ 1.28
PCNX1-209ENST00000554879 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
PCNX1-209ENST00000554879 NUP153P49790 1475 aaKnown RBP22.99■■□□□ 1.27
PCNX1-209ENST00000554879 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
PCNX1-209ENST00000554879 PPP1R15AO75807 674 aaPredicted RBP22.98■■□□□ 1.27
PCNX1-209ENST00000554879 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
PCNX1-209ENST00000554879 NUP160Q12769 1436 aa22.97■■□□□ 1.27
PCNX1-209ENST00000554879 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
PCNX1-209ENST00000554879 SAMD9Q5K651 1589 aa22.96■■□□□ 1.27
PCNX1-209ENST00000554879 CEP170Q5SW79 1584 aa22.95■■□□□ 1.27
PCNX1-209ENST00000554879 MIA2Q96PC5 1412 aa22.94■■□□□ 1.26
PCNX1-209ENST00000554879 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
PCNX1-209ENST00000554879 TIMELESSQ9UNS1 1208 aa22.94■■□□□ 1.26
PCNX1-209ENST00000554879 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
PCNX1-209ENST00000554879 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
PCNX1-209ENST00000554879 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
PCNX1-209ENST00000554879 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
PCNX1-209ENST00000554879 PTPRKQ15262 1439 aa22.9■■□□□ 1.26
PCNX1-209ENST00000554879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.9■■□□□ 1.26
PCNX1-209ENST00000554879 HFM1A2PYH4 1435 aa22.9■■□□□ 1.26
PCNX1-209ENST00000554879 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.26
PCNX1-209ENST00000554879 NAIPQ13075 1403 aa22.89■■□□□ 1.25
PCNX1-209ENST00000554879 RSPH4AQ5TD94 716 aa22.89■■□□□ 1.25
PCNX1-209ENST00000554879 PTPN23Q9H3S7 1636 aa22.89■■□□□ 1.25
PCNX1-209ENST00000554879 DCAF11Q8TEB1 546 aa22.88■■□□□ 1.25
PCNX1-209ENST00000554879 ATP10BO94823 1461 aa22.86■■□□□ 1.25
PCNX1-209ENST00000554879 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
PCNX1-209ENST00000554879 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
PCNX1-209ENST00000554879 EIF5BO60841 1220 aaKnown RBP22.85■■□□□ 1.25
PCNX1-209ENST00000554879 DAPK1P53355 1430 aa22.85■■□□□ 1.25
PCNX1-209ENST00000554879 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
PCNX1-209ENST00000554879 GGT6Q6P531 493 aa22.84■■□□□ 1.25
PCNX1-209ENST00000554879 KIF3BO15066 747 aa22.83■■□□□ 1.25
PCNX1-209ENST00000554879 ARHGAP5Q13017 1502 aa22.83■■□□□ 1.25
PCNX1-209ENST00000554879 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
PCNX1-209ENST00000554879 ANKRD50Q9ULJ7 1429 aa22.8■■□□□ 1.24
PCNX1-209ENST00000554879 ABCC5O15440 1437 aa22.8■■□□□ 1.24
PCNX1-209ENST00000554879 CARD11Q9BXL7 1154 aa22.79■■□□□ 1.24
PCNX1-209ENST00000554879 HSPA5P11021 654 aaKnown RBP22.79■■□□□ 1.24
PCNX1-209ENST00000554879 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
PCNX1-209ENST00000554879 ESF1Q9H501 851 aaKnown RBP22.77■■□□□ 1.23
PCNX1-209ENST00000554879 GPATCH8Q9UKJ3 1502 aaKnown RBP22.76■■□□□ 1.23
PCNX1-209ENST00000554879 C9orf84Q5VXU9 1444 aa22.75■■□□□ 1.23
PCNX1-209ENST00000554879 TSHZ2Q9NRE2 1034 aa22.75■■□□□ 1.23
PCNX1-209ENST00000554879 STAG3Q9UJ98 1225 aa22.73■■□□□ 1.23
PCNX1-209ENST00000554879 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
PCNX1-209ENST00000554879 CCDC136Q96JN2 1154 aa22.7■■□□□ 1.22
PCNX1-209ENST00000554879 MLECQ14165 292 aa22.7■■□□□ 1.22
PCNX1-209ENST00000554879 KIF14Q15058 1648 aa22.7■■□□□ 1.22
PCNX1-209ENST00000554879 RTN4Q9NQC3 1192 aaKnown RBP22.67■■□□□ 1.22
PCNX1-209ENST00000554879 KANK1Q14678 1352 aa22.67■■□□□ 1.22
PCNX1-209ENST00000554879 FKBP8Q14318 412 aa22.66■■□□□ 1.22
PCNX1-209ENST00000554879 FAM69CQ0P6D2 419 aa22.65■■□□□ 1.22
PCNX1-209ENST00000554879 ANO8Q9HCE9 1232 aaPredicted RBP22.65■■□□□ 1.22
PCNX1-209ENST00000554879 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.22
PCNX1-209ENST00000554879 NCOA1Q15788 1441 aa22.64■■□□□ 1.21
PCNX1-209ENST00000554879 CHD1O14646 1710 aa22.63■■□□□ 1.21
PCNX1-209ENST00000554879 NBR1Q14596 966 aa22.63■■□□□ 1.21
PCNX1-209ENST00000554879 ARID4BQ4LE39 1312 aaPredicted RBP22.63■■□□□ 1.21
PCNX1-209ENST00000554879 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
PCNX1-209ENST00000554879 RTL5Q5HYW3 569 aaPredicted RBP22.62■■□□□ 1.21
PCNX1-209ENST00000554879 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
PCNX1-209ENST00000554879 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
PCNX1-209ENST00000554879 MAPKBP1O60336 1514 aa22.58■■□□□ 1.21
PCNX1-209ENST00000554879 SCAPERQ9BY12 1400 aa22.57■■□□□ 1.2
PCNX1-209ENST00000554879 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
PCNX1-209ENST00000554879 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
PCNX1-209ENST00000554879 CCDC144AA2RUR9 1427 aa22.56■■□□□ 1.2
PCNX1-209ENST00000554879 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
PCNX1-209ENST00000554879 MRS2Q9HD23 443 aa22.56■■□□□ 1.2
PCNX1-209ENST00000554879 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.56■■□□□ 1.2
PCNX1-209ENST00000554879 RAPGEF3O95398 923 aa22.56■■□□□ 1.2
PCNX1-209ENST00000554879 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
PCNX1-209ENST00000554879 CCDC141Q6ZP82 1450 aa22.55■■□□□ 1.2
PCNX1-209ENST00000554879 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
PCNX1-209ENST00000554879 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
PCNX1-209ENST00000554879 ROCK2O75116 1388 aaKnown RBP22.51■■□□□ 1.19
PCNX1-209ENST00000554879 ABCC2Q92887 1545 aa22.5■■□□□ 1.19
PCNX1-209ENST00000554879 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
PCNX1-209ENST00000554879 KIAA1107Q9UPP5 1409 aa22.49■■□□□ 1.19
PCNX1-209ENST00000554879 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
PCNX1-209ENST00000554879 ABCA8O94911 1581 aa22.49■■□□□ 1.19
PCNX1-209ENST00000554879 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
PCNX1-209ENST00000554879 ASXL2Q76L83 1435 aa22.45■■□□□ 1.18
PCNX1-209ENST00000554879 ST20-MTHFSA0A0A6YYL1 179 aa22.45■■□□□ 1.18
PCNX1-209ENST00000554879 TMC1Q8TDI8 760 aa22.45■■□□□ 1.18
PCNX1-209ENST00000554879 DEKP35659 375 aaKnown RBP22.45■■□□□ 1.18
PCNX1-209ENST00000554879 ITSN2Q9NZM3 1697 aa22.44■■□□□ 1.18
PCNX1-209ENST00000554879 SALL2Q9Y467 1007 aaPredicted RBP22.44■■□□□ 1.18
PCNX1-209ENST00000554879 SYCP2Q9BX26 1530 aa22.44■■□□□ 1.18
PCNX1-209ENST00000554879 CD109Q6YHK3 1445 aa22.43■■□□□ 1.18
PCNX1-209ENST00000554879 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
PCNX1-209ENST00000554879 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms