RNA–Protein interactions for RNA: ENST00000554609.5

AP4S1-206, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP4S1, Length 1,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-206ENST00000554609 PRXQ9BXM0 1461 aa16.91■□□□□ 0.3
AP4S1-206ENST00000554609 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.3
AP4S1-206ENST00000554609 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
AP4S1-206ENST00000554609 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
AP4S1-206ENST00000554609 PCF11O94913 1555 aaKnown RBP16.88■□□□□ 0.29
AP4S1-206ENST00000554609 PHLDB1Q86UU1 1377 aa16.88■□□□□ 0.29
AP4S1-206ENST00000554609 POLA2Q14181 598 aa16.85■□□□□ 0.29
AP4S1-206ENST00000554609 NEO1Q92859 1461 aa16.85■□□□□ 0.29
AP4S1-206ENST00000554609 HSPA2P54652 639 aa16.83■□□□□ 0.28
AP4S1-206ENST00000554609 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
AP4S1-206ENST00000554609 RIMS1Q86UR5 1692 aaKnown RBP16.82■□□□□ 0.28
AP4S1-206ENST00000554609 SIGLEC1Q9BZZ2 1709 aa16.8■□□□□ 0.28
AP4S1-206ENST00000554609 RAPGEF6Q8TEU7 1601 aa16.8■□□□□ 0.28
AP4S1-206ENST00000554609 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
AP4S1-206ENST00000554609 RICTORQ6R327 1708 aa16.78■□□□□ 0.28
AP4S1-206ENST00000554609 NUP153P49790 1475 aaKnown RBP16.76■□□□□ 0.27
AP4S1-206ENST00000554609 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
AP4S1-206ENST00000554609 AKNAQ7Z591 1439 aa16.74■□□□□ 0.27
AP4S1-206ENST00000554609 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
AP4S1-206ENST00000554609 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
AP4S1-206ENST00000554609 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
AP4S1-206ENST00000554609 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
AP4S1-206ENST00000554609 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
AP4S1-206ENST00000554609 YEATS2Q9ULM3 1422 aa16.72■□□□□ 0.27
AP4S1-206ENST00000554609 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
AP4S1-206ENST00000554609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
AP4S1-206ENST00000554609 FANCAO15360 1455 aa16.69■□□□□ 0.26
AP4S1-206ENST00000554609 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
AP4S1-206ENST00000554609 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
AP4S1-206ENST00000554609 MLECQ14165 292 aa16.68■□□□□ 0.26
AP4S1-206ENST00000554609 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
AP4S1-206ENST00000554609 ZMYM4Q5VZL5 1548 aa16.67■□□□□ 0.26
AP4S1-206ENST00000554609 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
AP4S1-206ENST00000554609 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
AP4S1-206ENST00000554609 HECW1Q76N89 1606 aa16.65■□□□□ 0.26
AP4S1-206ENST00000554609 ZFYVE16Q7Z3T8 1539 aa16.65■□□□□ 0.26
AP4S1-206ENST00000554609 FER1L4A9Z1Z3 1794 aa16.64■□□□□ 0.25
AP4S1-206ENST00000554609 POGZQ7Z3K3 1410 aa16.63■□□□□ 0.25
AP4S1-206ENST00000554609 CEBPAP49715 358 aaPredicted RBP16.63■□□□□ 0.25
AP4S1-206ENST00000554609 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
AP4S1-206ENST00000554609 CFAP74Q9C0B2 1584 aa16.62■□□□□ 0.25
AP4S1-206ENST00000554609 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
AP4S1-206ENST00000554609 STRCQ7RTU9 1775 aa16.6■□□□□ 0.25
AP4S1-206ENST00000554609 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
AP4S1-206ENST00000554609 ARHGEF12Q9NZN5 1544 aa16.59■□□□□ 0.25
AP4S1-206ENST00000554609 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
AP4S1-206ENST00000554609 PLCH2O75038 1416 aa16.57■□□□□ 0.24
AP4S1-206ENST00000554609 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
AP4S1-206ENST00000554609 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
AP4S1-206ENST00000554609 ATP10AO60312 1499 aa16.55■□□□□ 0.24
AP4S1-206ENST00000554609 SOCS7O14512 581 aa16.54■□□□□ 0.24
AP4S1-206ENST00000554609 C9orf84Q5VXU9 1444 aa16.52■□□□□ 0.23
AP4S1-206ENST00000554609 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
AP4S1-206ENST00000554609 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
AP4S1-206ENST00000554609 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
AP4S1-206ENST00000554609 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.23
AP4S1-206ENST00000554609 KIF14Q15058 1648 aa16.46■□□□□ 0.23
AP4S1-206ENST00000554609 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
AP4S1-206ENST00000554609 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
AP4S1-206ENST00000554609 UHRF1BP1Q6BDS2 1440 aa16.45■□□□□ 0.22
AP4S1-206ENST00000554609 C3P01024 1663 aa16.44■□□□□ 0.22
AP4S1-206ENST00000554609 KDM5CP41229 1560 aa16.43■□□□□ 0.22
AP4S1-206ENST00000554609 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
AP4S1-206ENST00000554609 PTPRTO14522 1441 aa16.43■□□□□ 0.22
AP4S1-206ENST00000554609 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
AP4S1-206ENST00000554609 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
AP4S1-206ENST00000554609 EEA1Q15075 1411 aa16.42■□□□□ 0.22
AP4S1-206ENST00000554609 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
AP4S1-206ENST00000554609 SPATA31D1Q6ZQQ2 1576 aa16.41■□□□□ 0.22
AP4S1-206ENST00000554609 ABCA6Q8N139 1617 aa16.4■□□□□ 0.22
AP4S1-206ENST00000554609 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
AP4S1-206ENST00000554609 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
AP4S1-206ENST00000554609 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
AP4S1-206ENST00000554609 ARHGAP5Q13017 1502 aa16.38■□□□□ 0.21
AP4S1-206ENST00000554609 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
AP4S1-206ENST00000554609 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
AP4S1-206ENST00000554609 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
AP4S1-206ENST00000554609 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
AP4S1-206ENST00000554609 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
AP4S1-206ENST00000554609 AGLP35573 1532 aa16.35■□□□□ 0.21
AP4S1-206ENST00000554609 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
AP4S1-206ENST00000554609 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.2
AP4S1-206ENST00000554609 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
AP4S1-206ENST00000554609 KIDINS220Q9ULH0 1771 aa16.32■□□□□ 0.2
AP4S1-206ENST00000554609 IQSEC2Q5JU85 1478 aa16.31■□□□□ 0.2
AP4S1-206ENST00000554609 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
AP4S1-206ENST00000554609 ABCC1P33527 1531 aa16.29■□□□□ 0.2
AP4S1-206ENST00000554609 NCKAP5LQ9HCH0 1330 aa16.29■□□□□ 0.2
AP4S1-206ENST00000554609 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
AP4S1-206ENST00000554609 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
AP4S1-206ENST00000554609 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
AP4S1-206ENST00000554609 ESF1Q9H501 851 aaKnown RBP16.28■□□□□ 0.2
AP4S1-206ENST00000554609 PREX2Q70Z35 1606 aa16.27■□□□□ 0.2
AP4S1-206ENST00000554609 CLIP1P30622 1438 aa16.26■□□□□ 0.19
AP4S1-206ENST00000554609 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
AP4S1-206ENST00000554609 CNTLNQ9NXG0 1405 aa16.25■□□□□ 0.19
AP4S1-206ENST00000554609 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
AP4S1-206ENST00000554609 NPATQ14207 1427 aa16.23■□□□□ 0.19
AP4S1-206ENST00000554609 UBAP1LF5GYI3 381 aa16.23■□□□□ 0.19
AP4S1-206ENST00000554609 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms