RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CEP162Q5TB80 1403 aa14□□□□□ -0.17
ACTN1-213ENST00000554508 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
ACTN1-213ENST00000554508 ARHGEF40Q8TER5 1519 aa13.99□□□□□ -0.17
ACTN1-213ENST00000554508 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
ACTN1-213ENST00000554508 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
ACTN1-213ENST00000554508 ARID4BQ4LE39 1312 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-213ENST00000554508 ZFYVE16Q7Z3T8 1539 aa13.96□□□□□ -0.17
ACTN1-213ENST00000554508 CDC42BPAQ5VT25 1732 aa13.96□□□□□ -0.17
ACTN1-213ENST00000554508 ADAMTSL3P82987 1691 aa13.96□□□□□ -0.17
ACTN1-213ENST00000554508 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
ACTN1-213ENST00000554508 LOC105371045A0A1W2PR82 267 aa13.95□□□□□ -0.18
ACTN1-213ENST00000554508 ZNF518AQ6AHZ1 1483 aa13.94□□□□□ -0.18
ACTN1-213ENST00000554508 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
ACTN1-213ENST00000554508 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
ACTN1-213ENST00000554508 KDM5CP41229 1560 aa13.92□□□□□ -0.18
ACTN1-213ENST00000554508 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
ACTN1-213ENST00000554508 ATP10AO60312 1499 aa13.91□□□□□ -0.18
ACTN1-213ENST00000554508 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
ACTN1-213ENST00000554508 GPATCH8Q9UKJ3 1502 aaKnown RBP13.9□□□□□ -0.18
ACTN1-213ENST00000554508 ABCC1P33527 1531 aa13.9□□□□□ -0.19
ACTN1-213ENST00000554508 PTPRMP28827 1452 aa13.89□□□□□ -0.19
ACTN1-213ENST00000554508 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
ACTN1-213ENST00000554508 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
ACTN1-213ENST00000554508 HECW2Q9P2P5 1572 aa13.88□□□□□ -0.19
ACTN1-213ENST00000554508 MLH3Q9UHC1 1453 aa13.88□□□□□ -0.19
ACTN1-213ENST00000554508 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
ACTN1-213ENST00000554508 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
ACTN1-213ENST00000554508 C9orf84Q5VXU9 1444 aa13.88□□□□□ -0.19
ACTN1-213ENST00000554508 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
ACTN1-213ENST00000554508 ARHGEF12Q9NZN5 1544 aa13.87□□□□□ -0.19
ACTN1-213ENST00000554508 CFDP1Q9UEE9 299 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-213ENST00000554508 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-213ENST00000554508 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
ACTN1-213ENST00000554508 VPS8Q8N3P4 1428 aa13.86□□□□□ -0.19
ACTN1-213ENST00000554508 SAMD9LQ8IVG5 1584 aa13.86□□□□□ -0.19
ACTN1-213ENST00000554508 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
ACTN1-213ENST00000554508 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
ACTN1-213ENST00000554508 REREQ9P2R6 1566 aa13.84□□□□□ -0.19
ACTN1-213ENST00000554508 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
ACTN1-213ENST00000554508 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
ACTN1-213ENST00000554508 TIAM1Q13009 1591 aa13.83□□□□□ -0.19
ACTN1-213ENST00000554508 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
ACTN1-213ENST00000554508 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
ACTN1-213ENST00000554508 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.19
ACTN1-213ENST00000554508 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■■□□□ 11.9
ACTN1-213ENST00000554508 MLECQ14165 292 aa13.83□□□□□ -0.2
ACTN1-213ENST00000554508 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
ACTN1-213ENST00000554508 SYCP2Q9BX26 1530 aa13.82□□□□□ -0.2
ACTN1-213ENST00000554508 SPAG9O60271 1321 aaKnown RBP13.8□□□□□ -0.2
ACTN1-213ENST00000554508 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
ACTN1-213ENST00000554508 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
ACTN1-213ENST00000554508 AGLP35573 1532 aa13.79□□□□□ -0.2
ACTN1-213ENST00000554508 LRRC9Q6ZRR7 1453 aa13.78□□□□□ -0.2
ACTN1-213ENST00000554508 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
ACTN1-213ENST00000554508 ATP7AQ04656 1500 aa13.76□□□□□ -0.21
ACTN1-213ENST00000554508 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-213ENST00000554508 RSPH4AQ5TD94 716 aa13.76□□□□□ -0.21
ACTN1-213ENST00000554508 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-213ENST00000554508 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
ACTN1-213ENST00000554508 APLP2Q06481 763 aa13.74□□□□□ -0.21
ACTN1-213ENST00000554508 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
ACTN1-213ENST00000554508 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
ACTN1-213ENST00000554508 ESF1Q9H501 851 aaKnown RBP13.73□□□□□ -0.21
ACTN1-213ENST00000554508 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
ACTN1-213ENST00000554508 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-213ENST00000554508 CAMSAP2Q08AD1 1489 aa13.72□□□□□ -0.21
ACTN1-213ENST00000554508 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
ACTN1-213ENST00000554508 A2MP01023 1474 aa13.71□□□□□ -0.21
ACTN1-213ENST00000554508 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
ACTN1-213ENST00000554508 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
ACTN1-213ENST00000554508 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
ACTN1-213ENST00000554508 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
ACTN1-213ENST00000554508 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
ACTN1-213ENST00000554508 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-213ENST00000554508 C3P01024 1663 aa13.69□□□□□ -0.22
ACTN1-213ENST00000554508 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
ACTN1-213ENST00000554508 MIA2Q96PC5 1412 aa13.67□□□□□ -0.22
ACTN1-213ENST00000554508 MROH2AA6NES4 1674 aa13.67□□□□□ -0.22
ACTN1-213ENST00000554508 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
ACTN1-213ENST00000554508 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
ACTN1-213ENST00000554508 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
ACTN1-213ENST00000554508 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
ACTN1-213ENST00000554508 HSPA2P54652 639 aa13.64□□□□□ -0.23
ACTN1-213ENST00000554508 GGT6Q6P531 493 aa13.64□□□□□ -0.23
ACTN1-213ENST00000554508 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
ACTN1-213ENST00000554508 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
ACTN1-213ENST00000554508 MAST1Q9Y2H9 1570 aa13.62□□□□□ -0.23
ACTN1-213ENST00000554508 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
ACTN1-213ENST00000554508 KIF3BO15066 747 aa13.6□□□□□ -0.23
ACTN1-213ENST00000554508 NPATQ14207 1427 aa13.6□□□□□ -0.23
ACTN1-213ENST00000554508 PTPN23Q9H3S7 1636 aa13.59□□□□□ -0.23
ACTN1-213ENST00000554508 FAM135AQ9P2D6 1515 aa13.58□□□□□ -0.24
ACTN1-213ENST00000554508 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
ACTN1-213ENST00000554508 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
ACTN1-213ENST00000554508 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
ACTN1-213ENST00000554508 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
ACTN1-213ENST00000554508 CROCC2H7BZ55 1655 aa13.55□□□□□ -0.24
ACTN1-213ENST00000554508 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
ACTN1-213ENST00000554508 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
ACTN1-213ENST00000554508 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms