RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 TROQ12816 1431 aaPredicted RBP33.61■■■□□ 2.97
NEMP1-204ENST00000554340 SCAPERQ9BY12 1400 aa33.61■■■□□ 2.97
NEMP1-204ENST00000554340 YEATS2Q9ULM3 1422 aa33.6■■■□□ 2.97
NEMP1-204ENST00000554340 RIMS1Q86UR5 1692 aaKnown RBP33.6■■■□□ 2.97
NEMP1-204ENST00000554340 SIGLEC1Q9BZZ2 1709 aa33.59■■■□□ 2.97
NEMP1-204ENST00000554340 CLIP1P30622 1438 aa33.57■■■□□ 2.96
NEMP1-204ENST00000554340 EFCAB2Q5VUJ9 269 aa33.55■■■□□ 2.96
NEMP1-204ENST00000554340 ILDR1Q86SU0 546 aaPredicted RBP33.55■■■□□ 2.96
NEMP1-204ENST00000554340 PCF11O94913 1555 aaKnown RBP33.55■■■□□ 2.96
NEMP1-204ENST00000554340 CASKIN1Q8WXD9 1431 aa33.52■■■□□ 2.96
NEMP1-204ENST00000554340 ARHGAP5Q13017 1502 aa33.51■■■□□ 2.95
NEMP1-204ENST00000554340 CCDC18Q5T9S5 1454 aa33.5■■■□□ 2.95
NEMP1-204ENST00000554340 CDC42BPBQ9Y5S2 1711 aa33.47■■■□□ 2.95
NEMP1-204ENST00000554340 FER1L4A9Z1Z3 1794 aa33.45■■■□□ 2.95
NEMP1-204ENST00000554340 ATP10AO60312 1499 aa33.44■■■□□ 2.94
NEMP1-204ENST00000554340 ZNF518AQ6AHZ1 1483 aa33.44■■■□□ 2.94
NEMP1-204ENST00000554340 LMTK3Q96Q04 1460 aa33.43■■■□□ 2.94
NEMP1-204ENST00000554340 KDM5CP41229 1560 aa33.43■■■□□ 2.94
NEMP1-204ENST00000554340 PREX2Q70Z35 1606 aa33.42■■■□□ 2.94
NEMP1-204ENST00000554340 C9orf84Q5VXU9 1444 aa33.41■■■□□ 2.94
NEMP1-204ENST00000554340 FYCO1Q9BQS8 1478 aa33.41■■■□□ 2.94
NEMP1-204ENST00000554340 ARHGEF12Q9NZN5 1544 aa33.36■■■□□ 2.93
NEMP1-204ENST00000554340 MLECQ14165 292 aa33.34■■■□□ 2.93
NEMP1-204ENST00000554340 CDC42BPAQ5VT25 1732 aa33.33■■■□□ 2.93
NEMP1-204ENST00000554340 ABCC1P33527 1531 aa33.32■■■□□ 2.92
NEMP1-204ENST00000554340 AFAP1Q8N556 730 aa33.32■■■□□ 2.92
NEMP1-204ENST00000554340 ITSN2Q9NZM3 1697 aa33.31■■■□□ 2.92
NEMP1-204ENST00000554340 DIP2CQ9Y2E4 1556 aa33.3■■■□□ 2.92
NEMP1-204ENST00000554340 REREQ9P2R6 1566 aa33.28■■■□□ 2.92
NEMP1-204ENST00000554340 MLH3Q9UHC1 1453 aa33.26■■■□□ 2.92
NEMP1-204ENST00000554340 PLPPR3Q6T4P5 718 aa33.26■■■□□ 2.92
NEMP1-204ENST00000554340 ABCA6Q8N139 1617 aa33.26■■■□□ 2.91
NEMP1-204ENST00000554340 TRAPPC8Q9Y2L5 1435 aa33.22■■■□□ 2.91
NEMP1-204ENST00000554340 MYT1LQ9UL68 1186 aa33.21■■■□□ 2.91
NEMP1-204ENST00000554340 KIDINS220Q9ULH0 1771 aa33.17■■■□□ 2.9
NEMP1-204ENST00000554340 PREX1Q8TCU6 1659 aa33.17■■■□□ 2.9
NEMP1-204ENST00000554340 HSPA2P54652 639 aa33.16■■■□□ 2.9
NEMP1-204ENST00000554340 SAMD9LQ8IVG5 1584 aa33.15■■■□□ 2.9
NEMP1-204ENST00000554340 AGLP35573 1532 aa33.13■■■□□ 2.89
NEMP1-204ENST00000554340 GPATCH8Q9UKJ3 1502 aaKnown RBP33.13■■■□□ 2.89
NEMP1-204ENST00000554340 SYCP2Q9BX26 1530 aa33.09■■■□□ 2.89
NEMP1-204ENST00000554340 FBXO41Q8TF61 875 aa33.09■■■□□ 2.89
NEMP1-204ENST00000554340 SETD1BQ9UPS6 1966 aaKnown RBP33.06■■■□□ 2.88
NEMP1-204ENST00000554340 CEBPAP49715 358 aaPredicted RBP33.06■■■□□ 2.88
NEMP1-204ENST00000554340 ZNF777Q9ULD5 760 aaPredicted RBP33.06■■■□□ 2.88
NEMP1-204ENST00000554340 C3P01024 1663 aa33.05■■■□□ 2.88
NEMP1-204ENST00000554340 MTUS2Q5JR59 1369 aa33.02■■■□□ 2.88
NEMP1-204ENST00000554340 PLEKHH2Q8IVE3 1493 aa33.02■■■□□ 2.88
NEMP1-204ENST00000554340 CCNB3Q8WWL7 1395 aa33■■■□□ 2.87
NEMP1-204ENST00000554340 KIAA1107Q9UPP5 1409 aa33■■■□□ 2.87
NEMP1-204ENST00000554340 CFDP1Q9UEE9 299 aaPredicted RBP32.97■■■□□ 2.87
NEMP1-204ENST00000554340 EHBP1L1Q8N3D4 1523 aa32.97■■■□□ 2.87
NEMP1-204ENST00000554340 INO80Q9ULG1 1556 aaPredicted RBP32.97■■■□□ 2.87
NEMP1-204ENST00000554340 CEP162Q5TB80 1403 aa32.96■■■□□ 2.87
NEMP1-204ENST00000554340 UHRF1BP1Q6BDS2 1440 aa32.96■■■□□ 2.87
NEMP1-204ENST00000554340 SPAG9O60271 1321 aaKnown RBP32.96■■■□□ 2.87
NEMP1-204ENST00000554340 ATP7AQ04656 1500 aa32.96■■■□□ 2.87
NEMP1-204ENST00000554340 HNRNPMP52272 730 aaKnown RBP eCLIP32.96■■■□□ 2.872e-7■□□□□ 10.2
NEMP1-204ENST00000554340 TIAM1Q13009 1591 aa32.95■■■□□ 2.86
NEMP1-204ENST00000554340 ESF1Q9H501 851 aaKnown RBP32.95■■■□□ 2.86
NEMP1-204ENST00000554340 CNTLNQ9NXG0 1405 aa32.93■■■□□ 2.86
NEMP1-204ENST00000554340 SUPT6HQ7KZ85 1726 aaKnown RBP32.93■■■□□ 2.86
NEMP1-204ENST00000554340 STRCQ7RTU9 1775 aa32.91■■■□□ 2.86
NEMP1-204ENST00000554340 MROH2AA6NES4 1674 aa32.9■■■□□ 2.86
NEMP1-204ENST00000554340 PLXNC1O60486 1568 aa32.89■■■□□ 2.86
NEMP1-204ENST00000554340 ADGBQ8N7X0 1667 aa32.84■■■□□ 2.85
NEMP1-204ENST00000554340 A2MP01023 1474 aa32.83■■■□□ 2.85
NEMP1-204ENST00000554340 DMRT2Q9Y5R5 561 aa32.79■■■□□ 2.84
NEMP1-204ENST00000554340 MBD5Q9P267 1494 aa32.78■■■□□ 2.84
NEMP1-204ENST00000554340 ZNF644Q9H582 1327 aaPredicted RBP32.78■■■□□ 2.84
NEMP1-204ENST00000554340 CLTCQ00610 1675 aaKnown RBP32.78■■■□□ 2.84
NEMP1-204ENST00000554340 CERKQ8TCT0 537 aa32.77■■■□□ 2.84
NEMP1-204ENST00000554340 NPATQ14207 1427 aa32.76■■■□□ 2.84
NEMP1-204ENST00000554340 NCOA2Q15596 1464 aa32.73■■■□□ 2.83
NEMP1-204ENST00000554340 ZMYM3Q14202 1370 aa32.73■■■□□ 2.83
NEMP1-204ENST00000554340 RTEL1-TNFRSF6BF6WH68 1400 aa32.71■■■□□ 2.83
NEMP1-204ENST00000554340 PTPRTO14522 1441 aa32.69■■■□□ 2.82
NEMP1-204ENST00000554340 CAMSAP2Q08AD1 1489 aa32.67■■■□□ 2.82
NEMP1-204ENST00000554340 NCOA1Q15788 1441 aa32.66■■■□□ 2.82
NEMP1-204ENST00000554340 CCDC141Q6ZP82 1450 aa32.65■■■□□ 2.82
NEMP1-204ENST00000554340 GGT6Q6P531 493 aa32.64■■■□□ 2.82
NEMP1-204ENST00000554340 VPS8Q8N3P4 1428 aa32.64■■■□□ 2.82
NEMP1-204ENST00000554340 MYO3AQ8NEV4 1616 aa32.64■■■□□ 2.82
NEMP1-204ENST00000554340 ZNF142P52746 1687 aaPredicted RBP32.64■■■□□ 2.82
NEMP1-204ENST00000554340 PPP6R1Q9UPN7 881 aa32.62■■■□□ 2.81
NEMP1-204ENST00000554340 CAMSAP1Q5T5Y3 1602 aa32.62■■■□□ 2.81
NEMP1-204ENST00000554340 PTPRKQ15262 1439 aa32.61■■■□□ 2.81
NEMP1-204ENST00000554340 DHX29Q7Z478 1369 aaKnown RBP32.6■■■□□ 2.81
NEMP1-204ENST00000554340 ARHGEF5Q12774 1597 aa32.58■■■□□ 2.81
NEMP1-204ENST00000554340 LRRC9Q6ZRR7 1453 aa32.57■■■□□ 2.81
NEMP1-204ENST00000554340 LOC105371045A0A1W2PR82 267 aa32.57■■■□□ 2.8
NEMP1-204ENST00000554340 RSPH4AQ5TD94 716 aa32.57■■■□□ 2.8
NEMP1-204ENST00000554340 CEP170BQ9Y4F5 1589 aaPredicted RBP32.56■■■□□ 2.8
NEMP1-204ENST00000554340 FAM135AQ9P2D6 1515 aa32.51■■■□□ 2.8
NEMP1-204ENST00000554340 LTBP4Q8N2S1 1624 aa32.51■■■□□ 2.79
NEMP1-204ENST00000554340 MAP3K1Q13233 1512 aa32.51■■■□□ 2.79
NEMP1-204ENST00000554340 PLA2R1Q13018 1463 aa32.49■■■□□ 2.79
NEMP1-204ENST00000554340 KDM5DQ9BY66 1539 aa32.47■■■□□ 2.79
NEMP1-204ENST00000554340 KIF3BO15066 747 aa32.46■■■□□ 2.79
NEMP1-204ENST00000554340 MAST1Q9Y2H9 1570 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms