RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 DENND4BO75064 1496 aaPredicted RBP44.79■■■■■ 4.76
PCNX1-206ENST00000554292 ADGRL1O94910 1474 aa44.79■■■■■ 4.76
PCNX1-206ENST00000554292 SUPT6HQ7KZ85 1726 aaKnown RBP44.78■■■■■ 4.76
PCNX1-206ENST00000554292 RICTORQ6R327 1708 aa44.75■■■■■ 4.75
PCNX1-206ENST00000554292 APLP2Q06481 763 aa44.74■■■■■ 4.75
PCNX1-206ENST00000554292 FRMPD1Q5SYB0 1578 aa44.73■■■■■ 4.75
PCNX1-206ENST00000554292 CCNB3Q8WWL7 1395 aa44.73■■■■■ 4.75
PCNX1-206ENST00000554292 LRRC9Q6ZRR7 1453 aa44.72■■■■■ 4.75
PCNX1-206ENST00000554292 ITSN2Q9NZM3 1697 aa44.7■■■■■ 4.75
PCNX1-206ENST00000554292 GPATCH8Q9UKJ3 1502 aaKnown RBP44.7■■■■■ 4.75
PCNX1-206ENST00000554292 RAPGEF3O95398 923 aa44.7■■■■■ 4.75
PCNX1-206ENST00000554292 SCAPERQ9BY12 1400 aa44.69■■■■■ 4.75
PCNX1-206ENST00000554292 POGZQ7Z3K3 1410 aa44.63■■■■■ 4.73
PCNX1-206ENST00000554292 NCOA2Q15596 1464 aa44.63■■■■■ 4.73
PCNX1-206ENST00000554292 ZMYM4Q5VZL5 1548 aa44.6■■■■■ 4.73
PCNX1-206ENST00000554292 ABCC1P33527 1531 aa44.6■■■■■ 4.73
PCNX1-206ENST00000554292 CFDP1Q9UEE9 299 aaPredicted RBP44.57■■■■■ 4.73
PCNX1-206ENST00000554292 ZNF518AQ6AHZ1 1483 aa44.55■■■■■ 4.72
PCNX1-206ENST00000554292 SAMD9LQ8IVG5 1584 aa44.53■■■■■ 4.72
PCNX1-206ENST00000554292 KANK4Q5T7N3 995 aaPredicted RBP44.52■■■■■ 4.72
PCNX1-206ENST00000554292 ZNF777Q9ULD5 760 aaPredicted RBP44.51■■■■■ 4.72
PCNX1-206ENST00000554292 PLEKHH2Q8IVE3 1493 aa44.51■■■■■ 4.72
PCNX1-206ENST00000554292 MAGI2Q86UL8 1455 aa44.5■■■■■ 4.71
PCNX1-206ENST00000554292 ARHGEF40Q8TER5 1519 aa44.49■■■■■ 4.71
PCNX1-206ENST00000554292 KDM5CP41229 1560 aa44.46■■■■■ 4.71
PCNX1-206ENST00000554292 ZFYVE16Q7Z3T8 1539 aa44.45■■■■■ 4.71
PCNX1-206ENST00000554292 SYCP2Q9BX26 1530 aa44.42■■■■■ 4.7
PCNX1-206ENST00000554292 ARHGEF12Q9NZN5 1544 aa44.42■■■■■ 4.7
PCNX1-206ENST00000554292 KIAA1107Q9UPP5 1409 aa44.41■■■■■ 4.7
PCNX1-206ENST00000554292 HECW2Q9P2P5 1572 aa44.38■■■■■ 4.69
PCNX1-206ENST00000554292 TRAPPC8Q9Y2L5 1435 aa44.37■■■■■ 4.69
PCNX1-206ENST00000554292 AFAP1Q8N556 730 aa44.35■■■■■ 4.69
PCNX1-206ENST00000554292 MYOM3Q5VTT5 1437 aa44.31■■■■■ 4.68
PCNX1-206ENST00000554292 YEATS2Q9ULM3 1422 aa44.31■■■■■ 4.68
PCNX1-206ENST00000554292 MLH3Q9UHC1 1453 aa44.29■■■■■ 4.68
PCNX1-206ENST00000554292 CAMSAP2Q08AD1 1489 aa44.28■■■■■ 4.68
PCNX1-206ENST00000554292 HNRNPMP52272 730 aaKnown RBP eCLIP44.27■■■■■ 4.681e-6■■■■□ 22.1
PCNX1-206ENST00000554292 MYT1LQ9UL68 1186 aa44.26■■■■■ 4.68
PCNX1-206ENST00000554292 ZNF644Q9H582 1327 aaPredicted RBP44.24■■■■■ 4.67
PCNX1-206ENST00000554292 MIA2Q96PC5 1412 aa44.24■■■■■ 4.67
PCNX1-206ENST00000554292 ATP10AO60312 1499 aa44.21■■■■■ 4.67
PCNX1-206ENST00000554292 KIDINS220Q9ULH0 1771 aa44.18■■■■■ 4.66
PCNX1-206ENST00000554292 MBD5Q9P267 1494 aa44.18■■■■■ 4.66
PCNX1-206ENST00000554292 C9orf84Q5VXU9 1444 aa44.17■■■■■ 4.66
PCNX1-206ENST00000554292 DIP2CQ9Y2E4 1556 aa44.17■■■■■ 4.66
PCNX1-206ENST00000554292 KDM4FA0A1W2PPD8 638 aa44.16■■■■■ 4.66
PCNX1-206ENST00000554292 SPAG9O60271 1321 aaKnown RBP44.16■■■■■ 4.66
PCNX1-206ENST00000554292 ABCA6Q8N139 1617 aa44.16■■■■■ 4.66
PCNX1-206ENST00000554292 ARID4BQ4LE39 1312 aaPredicted RBP44.15■■■■■ 4.66
PCNX1-206ENST00000554292 AEBP2Q6ZN18 517 aaPredicted RBP44.13■■■■■ 4.66
PCNX1-206ENST00000554292 INO80Q9ULG1 1556 aaPredicted RBP44.13■■■■■ 4.65
PCNX1-206ENST00000554292 RSPH4AQ5TD94 716 aa44.12■■■■■ 4.65
PCNX1-206ENST00000554292 CCDC141Q6ZP82 1450 aa44.12■■■■■ 4.65
PCNX1-206ENST00000554292 ATP7AQ04656 1500 aa44.12■■■■■ 4.65
PCNX1-206ENST00000554292 ARHGEF5Q12774 1597 aa44.12■■■■■ 4.65
PCNX1-206ENST00000554292 REREQ9P2R6 1566 aa44.1■■■■■ 4.65
PCNX1-206ENST00000554292 BCORL1Q5H9F3 1711 aa44.09■■■■■ 4.65
PCNX1-206ENST00000554292 PTPN23Q9H3S7 1636 aa44.06■■■■■ 4.64
PCNX1-206ENST00000554292 SIGLEC1Q9BZZ2 1709 aa44.04■■■■■ 4.64
PCNX1-206ENST00000554292 FGD6Q6ZV73 1430 aa44.04■■■■■ 4.64
PCNX1-206ENST00000554292 ADAMTSL3P82987 1691 aa44.01■■■■■ 4.64
PCNX1-206ENST00000554292 RTEL1-TNFRSF6BF6WH68 1400 aa44■■■■■ 4.63
PCNX1-206ENST00000554292 ADGBQ8N7X0 1667 aa43.95■■■■■ 4.63
PCNX1-206ENST00000554292 TCOF1Q13428 1488 aaKnown RBP43.95■■■■■ 4.63
PCNX1-206ENST00000554292 AGLP35573 1532 aa43.93■■■■■ 4.62
PCNX1-206ENST00000554292 TSPY4P0CV99 314 aa43.92■■■■■ 4.62
PCNX1-206ENST00000554292 TSPY10P0CW01 314 aa43.92■■■■■ 4.62
PCNX1-206ENST00000554292 MAST1Q9Y2H9 1570 aa43.88■■■■■ 4.62
PCNX1-206ENST00000554292 MADDQ8WXG6 1647 aa43.88■■■■■ 4.62
PCNX1-206ENST00000554292 A2MP01023 1474 aa43.86■■■■■ 4.61
PCNX1-206ENST00000554292 CROCC2H7BZ55 1655 aa43.84■■■■■ 4.61
PCNX1-206ENST00000554292 PLXNC1O60486 1568 aa43.84■■■■■ 4.61
PCNX1-206ENST00000554292 FER1L4A9Z1Z3 1794 aa43.82■■■■■ 4.61
PCNX1-206ENST00000554292 DNMT1P26358 1616 aaKnown RBP43.82■■■■■ 4.61
PCNX1-206ENST00000554292 MLECQ14165 292 aa43.81■■■■■ 4.6
PCNX1-206ENST00000554292 SHANK2Q9UPX8 1470 aa43.79■■■■■ 4.6
PCNX1-206ENST00000554292 RIMS1Q86UR5 1692 aaKnown RBP43.78■■■■■ 4.6
PCNX1-206ENST00000554292 PPARGC1BQ86YN6 1023 aaKnown RBP43.78■■■■■ 4.6
PCNX1-206ENST00000554292 DAPK1P53355 1430 aa43.74■■■■■ 4.59
PCNX1-206ENST00000554292 ABCC5O15440 1437 aa43.73■■■■■ 4.59
PCNX1-206ENST00000554292 PTPRMP28827 1452 aa43.72■■■■■ 4.59
PCNX1-206ENST00000554292 FAM50AQ14320 339 aaKnown RBP43.71■■■■■ 4.59
PCNX1-206ENST00000554292 DHX29Q7Z478 1369 aaKnown RBP43.7■■■■■ 4.59
PCNX1-206ENST00000554292 ESF1Q9H501 851 aaKnown RBP43.59■■■■■ 4.57
PCNX1-206ENST00000554292 DUOX2Q9NRD8 1548 aa43.56■■■■■ 4.56
PCNX1-206ENST00000554292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.55■■■■■ 4.56
PCNX1-206ENST00000554292 CNTLNQ9NXG0 1405 aa43.55■■■■■ 4.56
PCNX1-206ENST00000554292 EIF2AK4Q9P2K8 1649 aaKnown RBP43.53■■■■■ 4.56
PCNX1-206ENST00000554292 ANKRD30AQ9BXX3 1397 aa43.53■■■■■ 4.56
PCNX1-206ENST00000554292 KIF15Q9NS87 1388 aa43.52■■■■■ 4.56
PCNX1-206ENST00000554292 KIF3BO15066 747 aa43.49■■■■■ 4.55
PCNX1-206ENST00000554292 GGT6Q6P531 493 aa43.49■■■■■ 4.55
PCNX1-206ENST00000554292 PPP6R1Q9UPN7 881 aa43.48■■■■■ 4.55
PCNX1-206ENST00000554292 ADGRL2O95490 1459 aa43.48■■■■■ 4.55
PCNX1-206ENST00000554292 MROH2AA6NES4 1674 aa43.48■■■■■ 4.55
PCNX1-206ENST00000554292 RRBP1Q9P2E9 1410 aaKnown RBP43.47■■■■■ 4.55
PCNX1-206ENST00000554292 CHIC2Q9UKJ5 165 aa43.46■■■■■ 4.55
PCNX1-206ENST00000554292 FAM135AQ9P2D6 1515 aa43.43■■■■■ 4.54
PCNX1-206ENST00000554292 ERBINQ96RT1 1412 aa43.43■■■■■ 4.54
PCNX1-206ENST00000554292 RRP7BPQ9NSQ0 103 aa43.43■■■■■ 4.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms