RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ARID4BQ4LE39 1312 aaPredicted RBP33.1■■■□□ 2.89
HIF1A-206ENST00000553999 ARHGEF40Q8TER5 1519 aa33.08■■■□□ 2.89
HIF1A-206ENST00000553999 POGZQ7Z3K3 1410 aa33.07■■■□□ 2.88
HIF1A-206ENST00000553999 YEATS2Q9ULM3 1422 aa33.06■■■□□ 2.88
HIF1A-206ENST00000553999 CDC42BPBQ9Y5S2 1711 aa33.04■■■□□ 2.88
HIF1A-206ENST00000553999 ZFYVE16Q7Z3T8 1539 aa33.03■■■□□ 2.88
HIF1A-206ENST00000553999 PREX2Q70Z35 1606 aa33.03■■■□□ 2.88
HIF1A-206ENST00000553999 ZMYM4Q5VZL5 1548 aa33.02■■■□□ 2.88
HIF1A-206ENST00000553999 MTUS2Q5JR59 1369 aa33■■■□□ 2.87
HIF1A-206ENST00000553999 ZNF777Q9ULD5 760 aaPredicted RBP32.98■■■□□ 2.87
HIF1A-206ENST00000553999 CDC42BPAQ5VT25 1732 aa32.97■■■□□ 2.87
HIF1A-206ENST00000553999 MYT1LQ9UL68 1186 aa32.97■■■□□ 2.87
HIF1A-206ENST00000553999 AFAP1Q8N556 730 aa32.95■■■□□ 2.87
HIF1A-206ENST00000553999 SIGLEC1Q9BZZ2 1709 aa32.91■■■□□ 2.86
HIF1A-206ENST00000553999 MLECQ14165 292 aa32.9■■■□□ 2.86
HIF1A-206ENST00000553999 ZNF518AQ6AHZ1 1483 aa32.9■■■□□ 2.86
HIF1A-206ENST00000553999 ABCC1P33527 1531 aa32.9■■■□□ 2.86
HIF1A-206ENST00000553999 BCORL1Q5H9F3 1711 aa32.9■■■□□ 2.86
HIF1A-206ENST00000553999 ARHGEF12Q9NZN5 1544 aa32.89■■■□□ 2.86
HIF1A-206ENST00000553999 ADAMTSL3P82987 1691 aa32.88■■■□□ 2.85
HIF1A-206ENST00000553999 GPATCH8Q9UKJ3 1502 aaKnown RBP32.88■■■□□ 2.85
HIF1A-206ENST00000553999 MADDQ8WXG6 1647 aa32.88■■■□□ 2.85
HIF1A-206ENST00000553999 MAGI2Q86UL8 1455 aa32.87■■■□□ 2.85
HIF1A-206ENST00000553999 TRAPPC8Q9Y2L5 1435 aa32.87■■■□□ 2.85
HIF1A-206ENST00000553999 CCNB3Q8WWL7 1395 aa32.87■■■□□ 2.85
HIF1A-206ENST00000553999 PLPPR3Q6T4P5 718 aa32.87■■■□□ 2.85
HIF1A-206ENST00000553999 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
HIF1A-206ENST00000553999 ITSN2Q9NZM3 1697 aa32.86■■■□□ 2.85
HIF1A-206ENST00000553999 VPS8Q8N3P4 1428 aa32.85■■■□□ 2.85
HIF1A-206ENST00000553999 SAMD9LQ8IVG5 1584 aa32.84■■■□□ 2.85
HIF1A-206ENST00000553999 KDM5CP41229 1560 aa32.83■■■□□ 2.85
HIF1A-206ENST00000553999 HECW2Q9P2P5 1572 aa32.82■■■□□ 2.84
HIF1A-206ENST00000553999 SYCP2Q9BX26 1530 aa32.82■■■□□ 2.84
HIF1A-206ENST00000553999 CFDP1Q9UEE9 299 aaPredicted RBP32.81■■■□□ 2.84
HIF1A-206ENST00000553999 PTPRMP28827 1452 aa32.8■■■□□ 2.84
HIF1A-206ENST00000553999 ATP10AO60312 1499 aa32.8■■■□□ 2.84
HIF1A-206ENST00000553999 RIMS1Q86UR5 1692 aaKnown RBP32.79■■■□□ 2.84
HIF1A-206ENST00000553999 TIAM1Q13009 1591 aa32.79■■■□□ 2.84
HIF1A-206ENST00000553999 C9orf84Q5VXU9 1444 aa32.78■■■□□ 2.84
HIF1A-206ENST00000553999 HNRNPMP52272 730 aaKnown RBP eCLIP32.77■■■□□ 2.848e-8■□□□□ 11.2
HIF1A-206ENST00000553999 DIP2CQ9Y2E4 1556 aa32.75■■■□□ 2.83
HIF1A-206ENST00000553999 ABCA6Q8N139 1617 aa32.75■■■□□ 2.83
HIF1A-206ENST00000553999 ZNF644Q9H582 1327 aaPredicted RBP32.72■■■□□ 2.83
HIF1A-206ENST00000553999 NCOA2Q15596 1464 aa32.69■■■□□ 2.82
HIF1A-206ENST00000553999 SUPT6HQ7KZ85 1726 aaKnown RBP32.68■■■□□ 2.82
HIF1A-206ENST00000553999 MLH3Q9UHC1 1453 aa32.67■■■□□ 2.82
HIF1A-206ENST00000553999 FER1L4A9Z1Z3 1794 aa32.65■■■□□ 2.82
HIF1A-206ENST00000553999 KIDINS220Q9ULH0 1771 aa32.65■■■□□ 2.82
HIF1A-206ENST00000553999 SPAG9O60271 1321 aaKnown RBP32.63■■■□□ 2.81
HIF1A-206ENST00000553999 LRRC9Q6ZRR7 1453 aa32.62■■■□□ 2.81
HIF1A-206ENST00000553999 KANK4Q5T7N3 995 aaPredicted RBP32.62■■■□□ 2.81
HIF1A-206ENST00000553999 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
HIF1A-206ENST00000553999 KIAA1107Q9UPP5 1409 aa32.58■■■□□ 2.81
HIF1A-206ENST00000553999 ATP7AQ04656 1500 aa32.56■■■□□ 2.8
HIF1A-206ENST00000553999 CAMSAP2Q08AD1 1489 aa32.54■■■□□ 2.8
HIF1A-206ENST00000553999 REREQ9P2R6 1566 aa32.53■■■□□ 2.8
HIF1A-206ENST00000553999 INO80Q9ULG1 1556 aaPredicted RBP32.52■■■□□ 2.8
HIF1A-206ENST00000553999 CEBPAP49715 358 aaPredicted RBP32.51■■■□□ 2.79
HIF1A-206ENST00000553999 APLP2Q06481 763 aa32.49■■■□□ 2.79
HIF1A-206ENST00000553999 MBD5Q9P267 1494 aa32.48■■■□□ 2.79
HIF1A-206ENST00000553999 MAP3K1Q13233 1512 aa32.46■■■□□ 2.79
HIF1A-206ENST00000553999 AGLP35573 1532 aa32.45■■■□□ 2.78
HIF1A-206ENST00000553999 LMTK3Q96Q04 1460 aa32.42■■■□□ 2.78
HIF1A-206ENST00000553999 ESF1Q9H501 851 aaKnown RBP32.42■■■□□ 2.78
HIF1A-206ENST00000553999 A2MP01023 1474 aa32.42■■■□□ 2.78
HIF1A-206ENST00000553999 HSPA2P54652 639 aa32.41■■■□□ 2.78
HIF1A-206ENST00000553999 CCDC141Q6ZP82 1450 aa32.41■■■□□ 2.78
HIF1A-206ENST00000553999 MYOM3Q5VTT5 1437 aa32.36■■■□□ 2.77
HIF1A-206ENST00000553999 PLXNC1O60486 1568 aa32.35■■■□□ 2.77
HIF1A-206ENST00000553999 ADGBQ8N7X0 1667 aa32.32■■■□□ 2.76
HIF1A-206ENST00000553999 GGT6Q6P531 493 aa32.32■■■□□ 2.76
HIF1A-206ENST00000553999 C3P01024 1663 aa32.3■■■□□ 2.76
HIF1A-206ENST00000553999 ARHGEF5Q12774 1597 aa32.28■■■□□ 2.76
HIF1A-206ENST00000553999 RTEL1-TNFRSF6BF6WH68 1400 aa32.28■■■□□ 2.76
HIF1A-206ENST00000553999 TSPY4P0CV99 314 aa32.24■■■□□ 2.75
HIF1A-206ENST00000553999 TSPY10P0CW01 314 aa32.24■■■□□ 2.75
HIF1A-206ENST00000553999 CLTCQ00610 1675 aaKnown RBP32.24■■■□□ 2.75
HIF1A-206ENST00000553999 PREX1Q8TCU6 1659 aa32.23■■■□□ 2.75
HIF1A-206ENST00000553999 MIA2Q96PC5 1412 aa32.23■■■□□ 2.75
HIF1A-206ENST00000553999 CNTLNQ9NXG0 1405 aa32.21■■■□□ 2.75
HIF1A-206ENST00000553999 RSPH4AQ5TD94 716 aa32.21■■■□□ 2.75
HIF1A-206ENST00000553999 DHX29Q7Z478 1369 aaKnown RBP32.2■■■□□ 2.75
HIF1A-206ENST00000553999 KIF3BO15066 747 aa32.2■■■□□ 2.75
HIF1A-206ENST00000553999 PTPN23Q9H3S7 1636 aa32.18■■■□□ 2.74
HIF1A-206ENST00000553999 UHRF1BP1Q6BDS2 1440 aa32.17■■■□□ 2.74
HIF1A-206ENST00000553999 ZMYM3Q14202 1370 aa32.16■■■□□ 2.74
HIF1A-206ENST00000553999 FGD6Q6ZV73 1430 aa32.14■■■□□ 2.74
HIF1A-206ENST00000553999 MROH2AA6NES4 1674 aa32.13■■■□□ 2.73
HIF1A-206ENST00000553999 PPARGC1BQ86YN6 1023 aaKnown RBP32.11■■■□□ 2.73
HIF1A-206ENST00000553999 MAST1Q9Y2H9 1570 aa32.11■■■□□ 2.73
HIF1A-206ENST00000553999 ABCC5O15440 1437 aa32.06■■■□□ 2.72
HIF1A-206ENST00000553999 CROCC2H7BZ55 1655 aa32.05■■■□□ 2.72
HIF1A-206ENST00000553999 FAM50AQ14320 339 aaKnown RBP32.04■■■□□ 2.72
HIF1A-206ENST00000553999 DAPK1P53355 1430 aa32.03■■■□□ 2.72
HIF1A-206ENST00000553999 CHIC2Q9UKJ5 165 aa32.03■■■□□ 2.72
HIF1A-206ENST00000553999 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
HIF1A-206ENST00000553999 RRP7BPQ9NSQ0 103 aa32.01■■■□□ 2.71
HIF1A-206ENST00000553999 PTPRKQ15262 1439 aa32■■■□□ 2.71
HIF1A-206ENST00000553999 DNMT1P26358 1616 aaKnown RBP32■■■□□ 2.71
HIF1A-206ENST00000553999 KDM5DQ9BY66 1539 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms