RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 ARID4BQ4LE39 1312 aaPredicted RBP28.5■■■□□ 2.15
FOXN3-204ENST00000553840 MAGI2Q86UL8 1455 aa28.49■■■□□ 2.15
FOXN3-204ENST00000553840 POGZQ7Z3K3 1410 aa28.47■■■□□ 2.15
FOXN3-204ENST00000553840 ZFYVE16Q7Z3T8 1539 aa28.47■■■□□ 2.15
FOXN3-204ENST00000553840 CDC42BPBQ9Y5S2 1711 aa28.45■■■□□ 2.14
FOXN3-204ENST00000553840 ADAMTSL3P82987 1691 aa28.45■■■□□ 2.14
FOXN3-204ENST00000553840 BCORL1Q5H9F3 1711 aa28.44■■■□□ 2.14
FOXN3-204ENST00000553840 PREX2Q70Z35 1606 aa28.43■■■□□ 2.14
FOXN3-204ENST00000553840 CEP162Q5TB80 1403 aa28.43■■■□□ 2.14
FOXN3-204ENST00000553840 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
FOXN3-204ENST00000553840 YEATS2Q9ULM3 1422 aa28.38■■■□□ 2.13
FOXN3-204ENST00000553840 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
FOXN3-204ENST00000553840 MADDQ8WXG6 1647 aa28.33■■■□□ 2.13
FOXN3-204ENST00000553840 MYT1LQ9UL68 1186 aa28.33■■■□□ 2.13
FOXN3-204ENST00000553840 PTPRMP28827 1452 aa28.33■■■□□ 2.13
FOXN3-204ENST00000553840 MTUS2Q5JR59 1369 aa28.32■■■□□ 2.12
FOXN3-204ENST00000553840 ATP10AO60312 1499 aa28.32■■■□□ 2.12
FOXN3-204ENST00000553840 AFAP1Q8N556 730 aa28.31■■■□□ 2.12
FOXN3-204ENST00000553840 KDM5CP41229 1560 aa28.31■■■□□ 2.12
FOXN3-204ENST00000553840 HECW2Q9P2P5 1572 aa28.31■■■□□ 2.12
FOXN3-204ENST00000553840 ABCC1P33527 1531 aa28.29■■■□□ 2.12
FOXN3-204ENST00000553840 ITSN2Q9NZM3 1697 aa28.29■■■□□ 2.12
FOXN3-204ENST00000553840 C9orf84Q5VXU9 1444 aa28.28■■■□□ 2.12
FOXN3-204ENST00000553840 RIMS1Q86UR5 1692 aaKnown RBP28.26■■■□□ 2.12
FOXN3-204ENST00000553840 LOC105371045A0A1W2PR82 267 aa28.26■■■□□ 2.11
FOXN3-204ENST00000553840 GPATCH8Q9UKJ3 1502 aaKnown RBP28.25■■■□□ 2.11
FOXN3-204ENST00000553840 ZNF777Q9ULD5 760 aaPredicted RBP28.25■■■□□ 2.11
FOXN3-204ENST00000553840 SIGLEC1Q9BZZ2 1709 aa28.25■■■□□ 2.11
FOXN3-204ENST00000553840 CCNB3Q8WWL7 1395 aa28.24■■■□□ 2.11
FOXN3-204ENST00000553840 EHBP1L1Q8N3D4 1523 aa28.23■■■□□ 2.11
FOXN3-204ENST00000553840 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
FOXN3-204ENST00000553840 MLECQ14165 292 aa28.22■■■□□ 2.11
FOXN3-204ENST00000553840 ARHGEF12Q9NZN5 1544 aa28.22■■■□□ 2.11
FOXN3-204ENST00000553840 TRAPPC8Q9Y2L5 1435 aa28.21■■■□□ 2.11
FOXN3-204ENST00000553840 FER1L4A9Z1Z3 1794 aa28.2■■■□□ 2.11
FOXN3-204ENST00000553840 CFDP1Q9UEE9 299 aaPredicted RBP28.2■■■□□ 2.1
FOXN3-204ENST00000553840 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
FOXN3-204ENST00000553840 DIP2CQ9Y2E4 1556 aa28.18■■■□□ 2.1
FOXN3-204ENST00000553840 PLEKHH2Q8IVE3 1493 aa28.17■■■□□ 2.1
FOXN3-204ENST00000553840 REREQ9P2R6 1566 aa28.16■■■□□ 2.1
FOXN3-204ENST00000553840 ABCA6Q8N139 1617 aa28.15■■■□□ 2.1
FOXN3-204ENST00000553840 SYCP2Q9BX26 1530 aa28.14■■■□□ 2.1
FOXN3-204ENST00000553840 KIDINS220Q9ULH0 1771 aa28.12■■■□□ 2.09
FOXN3-204ENST00000553840 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
FOXN3-204ENST00000553840 KIAA1107Q9UPP5 1409 aa28.12■■■□□ 2.09
FOXN3-204ENST00000553840 TIAM1Q13009 1591 aa28.11■■■□□ 2.09
FOXN3-204ENST00000553840 HNRNPMP52272 730 aaKnown RBP eCLIP28.11■■■□□ 2.097e-7■■■■□ 20.3
FOXN3-204ENST00000553840 SUPT6HQ7KZ85 1726 aaKnown RBP28.11■■■□□ 2.09
FOXN3-204ENST00000553840 PLPPR3Q6T4P5 718 aa28.1■■■□□ 2.09
FOXN3-204ENST00000553840 SPAG9O60271 1321 aaKnown RBP28.08■■■□□ 2.09
FOXN3-204ENST00000553840 AGLP35573 1532 aa28.05■■■□□ 2.08
FOXN3-204ENST00000553840 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
FOXN3-204ENST00000553840 ESF1Q9H501 851 aaKnown RBP28.02■■■□□ 2.08
FOXN3-204ENST00000553840 ATP7AQ04656 1500 aa28.02■■■□□ 2.08
FOXN3-204ENST00000553840 LMTK3Q96Q04 1460 aa28■■■□□ 2.07
FOXN3-204ENST00000553840 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
FOXN3-204ENST00000553840 ZNF644Q9H582 1327 aaPredicted RBP27.97■■■□□ 2.07
FOXN3-204ENST00000553840 LRRC9Q6ZRR7 1453 aa27.97■■■□□ 2.07
FOXN3-204ENST00000553840 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
FOXN3-204ENST00000553840 ADGBQ8N7X0 1667 aa27.92■■■□□ 2.06
FOXN3-204ENST00000553840 MBD5Q9P267 1494 aa27.92■■■□□ 2.06
FOXN3-204ENST00000553840 PREX1Q8TCU6 1659 aa27.91■■■□□ 2.06
FOXN3-204ENST00000553840 CEBPAP49715 358 aaPredicted RBP27.91■■■□□ 2.06
FOXN3-204ENST00000553840 APLP2Q06481 763 aa27.91■■■□□ 2.06
FOXN3-204ENST00000553840 RSPH4AQ5TD94 716 aa27.91■■■□□ 2.06
FOXN3-204ENST00000553840 A2MP01023 1474 aa27.9■■■□□ 2.06
FOXN3-204ENST00000553840 CNTLNQ9NXG0 1405 aa27.9■■■□□ 2.06
FOXN3-204ENST00000553840 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.06
FOXN3-204ENST00000553840 SETD1BQ9UPS6 1966 aaKnown RBP27.89■■■□□ 2.06
FOXN3-204ENST00000553840 RTEL1-TNFRSF6BF6WH68 1400 aa27.88■■■□□ 2.05
FOXN3-204ENST00000553840 C3P01024 1663 aa27.87■■■□□ 2.05
FOXN3-204ENST00000553840 CCDC141Q6ZP82 1450 aa27.87■■■□□ 2.05
FOXN3-204ENST00000553840 PLXNC1O60486 1568 aa27.86■■■□□ 2.05
FOXN3-204ENST00000553840 HSPA2P54652 639 aa27.85■■■□□ 2.05
FOXN3-204ENST00000553840 KANK4Q5T7N3 995 aaPredicted RBP27.84■■■□□ 2.05
FOXN3-204ENST00000553840 MROH2AA6NES4 1674 aa27.81■■■□□ 2.04
FOXN3-204ENST00000553840 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
FOXN3-204ENST00000553840 TSPY4P0CV99 314 aa27.8■■■□□ 2.04
FOXN3-204ENST00000553840 TSPY10P0CW01 314 aa27.8■■■□□ 2.04
FOXN3-204ENST00000553840 UHRF1BP1Q6BDS2 1440 aa27.8■■■□□ 2.04
FOXN3-204ENST00000553840 GGT6Q6P531 493 aa27.78■■■□□ 2.04
FOXN3-204ENST00000553840 MYOM3Q5VTT5 1437 aa27.76■■■□□ 2.04
FOXN3-204ENST00000553840 MIA2Q96PC5 1412 aa27.76■■■□□ 2.04
FOXN3-204ENST00000553840 DHX29Q7Z478 1369 aaKnown RBP27.76■■■□□ 2.03
FOXN3-204ENST00000553840 PPP6R1Q9UPN7 881 aa27.76■■■□□ 2.03
FOXN3-204ENST00000553840 CLTCQ00610 1675 aaKnown RBP27.75■■■□□ 2.03
FOXN3-204ENST00000553840 ZMYM3Q14202 1370 aa27.73■■■□□ 2.03
FOXN3-204ENST00000553840 ILDR1Q86SU0 546 aaPredicted RBP27.71■■■□□ 2.03
FOXN3-204ENST00000553840 NPATQ14207 1427 aa27.7■■■□□ 2.03
FOXN3-204ENST00000553840 KIF3BO15066 747 aa27.67■■■□□ 2.02
FOXN3-204ENST00000553840 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
FOXN3-204ENST00000553840 DMRT2Q9Y5R5 561 aa27.64■■■□□ 2.02
FOXN3-204ENST00000553840 FAM135AQ9P2D6 1515 aa27.61■■■□□ 2.01
FOXN3-204ENST00000553840 PTPN23Q9H3S7 1636 aa27.6■■■□□ 2.01
FOXN3-204ENST00000553840 STRCQ7RTU9 1775 aa27.6■■■□□ 2.01
FOXN3-204ENST00000553840 PTPRKQ15262 1439 aa27.57■■■□□ 2
FOXN3-204ENST00000553840 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
FOXN3-204ENST00000553840 WASHC2CQ9Y4E1 1318 aa27.56■■■□□ 2
FOXN3-204ENST00000553840 CROCC2H7BZ55 1655 aa27.54■■■□□ 2
FOXN3-204ENST00000553840 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms