RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 C2orf72A6NCS6 295 aa9.66□□□□□ -0.86
PCNX4-206ENST00000553513 KIF3CO14782 793 aa9.66□□□□□ -0.86
PCNX4-206ENST00000553513 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
PCNX4-206ENST00000553513 CFAP44Q96MT7 982 aa9.66□□□□□ -0.86
PCNX4-206ENST00000553513 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
PCNX4-206ENST00000553513 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
PCNX4-206ENST00000553513 RIMBP2O15034 1052 aa9.61□□□□□ -0.87
PCNX4-206ENST00000553513 ST18O60284 1047 aa9.61□□□□□ -0.87
PCNX4-206ENST00000553513 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
PCNX4-206ENST00000553513 ZNF710Q8N1W2 664 aa9.6□□□□□ -0.87
PCNX4-206ENST00000553513 PDE4AP27815 886 aa9.59□□□□□ -0.87
PCNX4-206ENST00000553513 LCE2DQ5TA82 110 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-206ENST00000553513 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
PCNX4-206ENST00000553513 FOXK1P85037 733 aa9.58□□□□□ -0.88
PCNX4-206ENST00000553513 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
PCNX4-206ENST00000553513 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
PCNX4-206ENST00000553513 DSG2Q14126 1118 aa9.56□□□□□ -0.88
PCNX4-206ENST00000553513 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
PCNX4-206ENST00000553513 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
PCNX4-206ENST00000553513 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
PCNX4-206ENST00000553513 POTEMA6NI47 508 aa9.53□□□□□ -0.88
PCNX4-206ENST00000553513 SLC34A2O95436 690 aa9.53□□□□□ -0.88
PCNX4-206ENST00000553513 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
PCNX4-206ENST00000553513 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
PCNX4-206ENST00000553513 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
PCNX4-206ENST00000553513 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
PCNX4-206ENST00000553513 MFSD10Q14728 455 aa9.51□□□□□ -0.89
PCNX4-206ENST00000553513 EMP3P54852 163 aa9.5□□□□□ -0.89
PCNX4-206ENST00000553513 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
PCNX4-206ENST00000553513 GPR153Q6NV75 609 aa9.49□□□□□ -0.89
PCNX4-206ENST00000553513 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
PCNX4-206ENST00000553513 ARSIQ5FYB1 569 aa9.47□□□□□ -0.89
PCNX4-206ENST00000553513 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
PCNX4-206ENST00000553513 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
PCNX4-206ENST00000553513 TBC1D12O60347 775 aa9.45□□□□□ -0.9
PCNX4-206ENST00000553513 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
PCNX4-206ENST00000553513 ERBB3P21860 1342 aa9.42□□□□□ -0.9
PCNX4-206ENST00000553513 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
PCNX4-206ENST00000553513 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
PCNX4-206ENST00000553513 KHSRPQ92945 711 aaKnown RBP eCLIP9.42□□□□□ -0.9
PCNX4-206ENST00000553513 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
PCNX4-206ENST00000553513 NUDT7P0C024 238 aa9.41□□□□□ -0.9
PCNX4-206ENST00000553513 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCNX4-206ENST00000553513 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
PCNX4-206ENST00000553513 PCDH10Q9P2E7 1040 aa9.4□□□□□ -0.9
PCNX4-206ENST00000553513 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
PCNX4-206ENST00000553513 ZNF316A6NFI3 1004 aaPredicted RBP9.38□□□□□ -0.91
PCNX4-206ENST00000553513 VARS2Q5ST30 1063 aaKnown RBP9.37□□□□□ -0.91
PCNX4-206ENST00000553513 EMILIN3Q9NT22 766 aa9.37□□□□□ -0.91
PCNX4-206ENST00000553513 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
PCNX4-206ENST00000553513 CDAN1Q8IWY9 1227 aa9.36□□□□□ -0.91
PCNX4-206ENST00000553513 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
PCNX4-206ENST00000553513 HAP1P54257 671 aaPredicted RBP9.35□□□□□ -0.91
PCNX4-206ENST00000553513 E2F4Q16254 413 aa9.35□□□□□ -0.91
PCNX4-206ENST00000553513 LHX6Q9UPM6 363 aa9.35□□□□□ -0.91
PCNX4-206ENST00000553513 POTEB3A0JP26 581 aa9.34□□□□□ -0.91
PCNX4-206ENST00000553513 POTEBQ6S5H4 581 aa9.34□□□□□ -0.91
PCNX4-206ENST00000553513 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
PCNX4-206ENST00000553513 EVI5O60447 810 aa9.32□□□□□ -0.92
PCNX4-206ENST00000553513 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
PCNX4-206ENST00000553513 ZNF687Q8N1G0 1237 aa9.3□□□□□ -0.92
PCNX4-206ENST00000553513 DPYSL4O14531 572 aa9.29□□□□□ -0.92
PCNX4-206ENST00000553513 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
PCNX4-206ENST00000553513 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
PCNX4-206ENST00000553513 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
PCNX4-206ENST00000553513 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
PCNX4-206ENST00000553513 PBX2P40425 430 aa9.24□□□□□ -0.93
PCNX4-206ENST00000553513 ZNF454Q8N9F8 522 aa9.24□□□□□ -0.93
PCNX4-206ENST00000553513 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
PCNX4-206ENST00000553513 FOSBP53539 338 aa9.23□□□□□ -0.93
PCNX4-206ENST00000553513 PDIA6Q15084 440 aa9.23□□□□□ -0.93
PCNX4-206ENST00000553513 P3H3Q8IVL6 736 aa9.23□□□□□ -0.93
PCNX4-206ENST00000553513 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
PCNX4-206ENST00000553513 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
PCNX4-206ENST00000553513 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
PCNX4-206ENST00000553513 KCNV2Q8TDN2 545 aa9.21□□□□□ -0.94
PCNX4-206ENST00000553513 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
PCNX4-206ENST00000553513 PHF14O94880 888 aa9.19□□□□□ -0.94
PCNX4-206ENST00000553513 PTGER2P43116 358 aa9.19□□□□□ -0.94
PCNX4-206ENST00000553513 KCNH8Q96L42 1107 aa9.19□□□□□ -0.94
PCNX4-206ENST00000553513 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
PCNX4-206ENST00000553513 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
PCNX4-206ENST00000553513 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
PCNX4-206ENST00000553513 EPAS1Q99814 870 aa9.17□□□□□ -0.94
PCNX4-206ENST00000553513 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
PCNX4-206ENST00000553513 KDM2AQ9Y2K7 1162 aa9.17□□□□□ -0.94
PCNX4-206ENST00000553513 AXIN2Q9Y2T1 843 aa9.17□□□□□ -0.94
PCNX4-206ENST00000553513 PCDHGA10Q9Y5H3 936 aa9.17□□□□□ -0.94
PCNX4-206ENST00000553513 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
PCNX4-206ENST00000553513 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
PCNX4-206ENST00000553513 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
PCNX4-206ENST00000553513 DDX12PQ92771 950 aa9.16□□□□□ -0.94
PCNX4-206ENST00000553513 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
PCNX4-206ENST00000553513 PTPREP23469 700 aa9.14□□□□□ -0.95
PCNX4-206ENST00000553513 ADAM33Q9BZ11 813 aa9.14□□□□□ -0.95
PCNX4-206ENST00000553513 PSEN2P49810 448 aa9.13□□□□□ -0.95
PCNX4-206ENST00000553513 ANKRD13DQ6ZTN6 518 aa9.13□□□□□ -0.95
PCNX4-206ENST00000553513 NBR1Q14596 966 aa9.12□□□□□ -0.95
PCNX4-206ENST00000553513 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
PCNX4-206ENST00000553513 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms