RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 MAGI2Q86UL8 1455 aa13.12□□□□□ -0.31
PCNX1-204ENST00000553428 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
PCNX1-204ENST00000553428 POGZQ7Z3K3 1410 aa13.12□□□□□ -0.31
PCNX1-204ENST00000553428 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
PCNX1-204ENST00000553428 ZMYM4Q5VZL5 1548 aa13.11□□□□□ -0.31
PCNX1-204ENST00000553428 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
PCNX1-204ENST00000553428 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
PCNX1-204ENST00000553428 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
PCNX1-204ENST00000553428 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
PCNX1-204ENST00000553428 ZNF518AQ6AHZ1 1483 aa13.09□□□□□ -0.31
PCNX1-204ENST00000553428 RICTORQ6R327 1708 aa13.08□□□□□ -0.32
PCNX1-204ENST00000553428 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
PCNX1-204ENST00000553428 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
PCNX1-204ENST00000553428 ARHGEF40Q8TER5 1519 aa13.07□□□□□ -0.32
PCNX1-204ENST00000553428 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
PCNX1-204ENST00000553428 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
PCNX1-204ENST00000553428 CDC42BPBQ9Y5S2 1711 aa13.06□□□□□ -0.32
PCNX1-204ENST00000553428 ZFYVE16Q7Z3T8 1539 aa13.06□□□□□ -0.32
PCNX1-204ENST00000553428 ABCC1P33527 1531 aa13.05□□□□□ -0.32
PCNX1-204ENST00000553428 APLP2Q06481 763 aa13.05□□□□□ -0.32
PCNX1-204ENST00000553428 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
PCNX1-204ENST00000553428 KDM5CP41229 1560 aa13.04□□□□□ -0.32
PCNX1-204ENST00000553428 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
PCNX1-204ENST00000553428 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
PCNX1-204ENST00000553428 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
PCNX1-204ENST00000553428 ZNF777Q9ULD5 760 aaPredicted RBP13.03□□□□□ -0.32
PCNX1-204ENST00000553428 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
PCNX1-204ENST00000553428 MLH3Q9UHC1 1453 aa13.03□□□□□ -0.32
PCNX1-204ENST00000553428 ARHGEF12Q9NZN5 1544 aa13.03□□□□□ -0.32
PCNX1-204ENST00000553428 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
PCNX1-204ENST00000553428 TRAPPC8Q9Y2L5 1435 aa13.02□□□□□ -0.33
PCNX1-204ENST00000553428 ATP10AO60312 1499 aa13.02□□□□□ -0.33
PCNX1-204ENST00000553428 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.33
PCNX1-204ENST00000553428 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
PCNX1-204ENST00000553428 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
PCNX1-204ENST00000553428 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
PCNX1-204ENST00000553428 HECW2Q9P2P5 1572 aa12.99□□□□□ -0.33
PCNX1-204ENST00000553428 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
PCNX1-204ENST00000553428 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
PCNX1-204ENST00000553428 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
PCNX1-204ENST00000553428 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
PCNX1-204ENST00000553428 HNRNPMP52272 730 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCNX1-204ENST00000553428 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
PCNX1-204ENST00000553428 REREQ9P2R6 1566 aa12.96□□□□□ -0.33
PCNX1-204ENST00000553428 MBD5Q9P267 1494 aa12.96□□□□□ -0.34
PCNX1-204ENST00000553428 MIA2Q96PC5 1412 aa12.96□□□□□ -0.34
PCNX1-204ENST00000553428 ADAMTSL3P82987 1691 aa12.96□□□□□ -0.34
PCNX1-204ENST00000553428 ZNF644Q9H582 1327 aaPredicted RBP12.95□□□□□ -0.34
PCNX1-204ENST00000553428 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
PCNX1-204ENST00000553428 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
PCNX1-204ENST00000553428 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
PCNX1-204ENST00000553428 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
PCNX1-204ENST00000553428 AGLP35573 1532 aa12.93□□□□□ -0.34
PCNX1-204ENST00000553428 CAMSAP2Q08AD1 1489 aa12.93□□□□□ -0.34
PCNX1-204ENST00000553428 PTPRMP28827 1452 aa12.92□□□□□ -0.34
PCNX1-204ENST00000553428 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
PCNX1-204ENST00000553428 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
PCNX1-204ENST00000553428 CCDC141Q6ZP82 1450 aa12.91□□□□□ -0.34
PCNX1-204ENST00000553428 KIDINS220Q9ULH0 1771 aa12.91□□□□□ -0.34
PCNX1-204ENST00000553428 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
PCNX1-204ENST00000553428 TSPY4P0CV99 314 aa12.89□□□□□ -0.35
PCNX1-204ENST00000553428 TSPY10P0CW01 314 aa12.89□□□□□ -0.35
PCNX1-204ENST00000553428 MLECQ14165 292 aa12.89□□□□□ -0.35
PCNX1-204ENST00000553428 ARHGEF5Q12774 1597 aa12.89□□□□□ -0.35
PCNX1-204ENST00000553428 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
PCNX1-204ENST00000553428 A2MP01023 1474 aa12.88□□□□□ -0.35
PCNX1-204ENST00000553428 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
PCNX1-204ENST00000553428 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
PCNX1-204ENST00000553428 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
PCNX1-204ENST00000553428 ESF1Q9H501 851 aaKnown RBP12.85□□□□□ -0.35
PCNX1-204ENST00000553428 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
PCNX1-204ENST00000553428 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
PCNX1-204ENST00000553428 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
PCNX1-204ENST00000553428 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
PCNX1-204ENST00000553428 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.36
PCNX1-204ENST00000553428 MAST1Q9Y2H9 1570 aa12.82□□□□□ -0.36
PCNX1-204ENST00000553428 ADGBQ8N7X0 1667 aa12.82□□□□□ -0.36
PCNX1-204ENST00000553428 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
PCNX1-204ENST00000553428 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
PCNX1-204ENST00000553428 FER1L4A9Z1Z3 1794 aa12.81□□□□□ -0.36
PCNX1-204ENST00000553428 ABCC5O15440 1437 aa12.79□□□□□ -0.36
PCNX1-204ENST00000553428 GGT6Q6P531 493 aa12.78□□□□□ -0.36
PCNX1-204ENST00000553428 DAPK1P53355 1430 aa12.78□□□□□ -0.36
PCNX1-204ENST00000553428 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
PCNX1-204ENST00000553428 KIF3BO15066 747 aa12.77□□□□□ -0.37
PCNX1-204ENST00000553428 CEBPAP49715 358 aaPredicted RBP12.76□□□□□ -0.37
PCNX1-204ENST00000553428 DNMT1P26358 1616 aaKnown RBP12.76□□□□□ -0.37
PCNX1-204ENST00000553428 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
PCNX1-204ENST00000553428 NPATQ14207 1427 aa12.75□□□□□ -0.37
PCNX1-204ENST00000553428 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
PCNX1-204ENST00000553428 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
PCNX1-204ENST00000553428 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
PCNX1-204ENST00000553428 ANKRD30AQ9BXX3 1397 aa12.74□□□□□ -0.37
PCNX1-204ENST00000553428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCNX1-204ENST00000553428 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
PCNX1-204ENST00000553428 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
PCNX1-204ENST00000553428 MROH2AA6NES4 1674 aa12.73□□□□□ -0.37
PCNX1-204ENST00000553428 UHRF1BP1Q6BDS2 1440 aa12.72□□□□□ -0.37
PCNX1-204ENST00000553428 ERBINQ96RT1 1412 aa12.72□□□□□ -0.37
PCNX1-204ENST00000553428 CROCC2H7BZ55 1655 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms