RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
PCNX1-204ENST00000553428 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
PCNX1-204ENST00000553428 ABCC9O60706 1549 aa17.59■□□□□ 0.41
PCNX1-204ENST00000553428 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
PCNX1-204ENST00000553428 NACADO15069 1562 aa16.93■□□□□ 0.3
PCNX1-204ENST00000553428 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
PCNX1-204ENST00000553428 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
PCNX1-204ENST00000553428 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
PCNX1-204ENST00000553428 DCAF1Q9Y4B6 1507 aa16.74■□□□□ 0.27
PCNX1-204ENST00000553428 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCNX1-204ENST00000553428 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
PCNX1-204ENST00000553428 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
PCNX1-204ENST00000553428 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
PCNX1-204ENST00000553428 SCRIBQ14160 1630 aa16.31■□□□□ 0.2
PCNX1-204ENST00000553428 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
PCNX1-204ENST00000553428 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
PCNX1-204ENST00000553428 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
PCNX1-204ENST00000553428 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
PCNX1-204ENST00000553428 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
PCNX1-204ENST00000553428 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
PCNX1-204ENST00000553428 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
PCNX1-204ENST00000553428 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
PCNX1-204ENST00000553428 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
PCNX1-204ENST00000553428 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
PCNX1-204ENST00000553428 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PCNX1-204ENST00000553428 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
PCNX1-204ENST00000553428 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
PCNX1-204ENST00000553428 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
PCNX1-204ENST00000553428 WIZO95785 1651 aa15.29■□□□□ 0.04
PCNX1-204ENST00000553428 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
PCNX1-204ENST00000553428 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
PCNX1-204ENST00000553428 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
PCNX1-204ENST00000553428 NESP48681 1621 aa15.18■□□□□ 0.02
PCNX1-204ENST00000553428 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
PCNX1-204ENST00000553428 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
PCNX1-204ENST00000553428 CUX2O14529 1486 aa15.1■□□□□ 0.01
PCNX1-204ENST00000553428 CFTRP13569 1480 aa15.06■□□□□ 0
PCNX1-204ENST00000553428 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
PCNX1-204ENST00000553428 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
PCNX1-204ENST00000553428 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
PCNX1-204ENST00000553428 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
PCNX1-204ENST00000553428 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
PCNX1-204ENST00000553428 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
PCNX1-204ENST00000553428 WDR62O43379 1518 aa14.89□□□□□ -0.03
PCNX1-204ENST00000553428 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
PCNX1-204ENST00000553428 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
PCNX1-204ENST00000553428 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
PCNX1-204ENST00000553428 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
PCNX1-204ENST00000553428 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
PCNX1-204ENST00000553428 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
PCNX1-204ENST00000553428 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
PCNX1-204ENST00000553428 IFT140Q96RY7 1462 aa14.67□□□□□ -0.06
PCNX1-204ENST00000553428 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
PCNX1-204ENST00000553428 CUX1P39880 1505 aa14.56□□□□□ -0.08
PCNX1-204ENST00000553428 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
PCNX1-204ENST00000553428 SOGA1O94964 1423 aa14.54□□□□□ -0.08
PCNX1-204ENST00000553428 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
PCNX1-204ENST00000553428 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
PCNX1-204ENST00000553428 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
PCNX1-204ENST00000553428 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
PCNX1-204ENST00000553428 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
PCNX1-204ENST00000553428 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
PCNX1-204ENST00000553428 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.09
PCNX1-204ENST00000553428 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
PCNX1-204ENST00000553428 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
PCNX1-204ENST00000553428 TOP2BQ02880 1626 aa14.43□□□□□ -0.1
PCNX1-204ENST00000553428 ABCA10Q8WWZ4 1543 aa14.42□□□□□ -0.1
PCNX1-204ENST00000553428 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
PCNX1-204ENST00000553428 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
PCNX1-204ENST00000553428 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
PCNX1-204ENST00000553428 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
PCNX1-204ENST00000553428 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-204ENST00000553428 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
PCNX1-204ENST00000553428 ABCA5Q8WWZ7 1642 aa14.32□□□□□ -0.12
PCNX1-204ENST00000553428 FBLN2P98095 1184 aa14.31□□□□□ -0.12
PCNX1-204ENST00000553428 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
PCNX1-204ENST00000553428 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
PCNX1-204ENST00000553428 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
PCNX1-204ENST00000553428 CHD1O14646 1710 aa14.25□□□□□ -0.13
PCNX1-204ENST00000553428 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
PCNX1-204ENST00000553428 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
PCNX1-204ENST00000553428 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
PCNX1-204ENST00000553428 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
PCNX1-204ENST00000553428 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
PCNX1-204ENST00000553428 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
PCNX1-204ENST00000553428 CLASP1Q7Z460 1538 aa14.18□□□□□ -0.14
PCNX1-204ENST00000553428 NUP160Q12769 1436 aa14.15□□□□□ -0.14
PCNX1-204ENST00000553428 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
PCNX1-204ENST00000553428 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
PCNX1-204ENST00000553428 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
PCNX1-204ENST00000553428 IGF1RP08069 1367 aa14.14□□□□□ -0.15
PCNX1-204ENST00000553428 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
PCNX1-204ENST00000553428 CUL7Q14999 1698 aa14.07□□□□□ -0.16
PCNX1-204ENST00000553428 CEP170Q5SW79 1584 aa14.07□□□□□ -0.16
PCNX1-204ENST00000553428 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
PCNX1-204ENST00000553428 CYB5RLQ6IPT4 315 aa14.06□□□□□ -0.16
PCNX1-204ENST00000553428 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
PCNX1-204ENST00000553428 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
PCNX1-204ENST00000553428 JPH4Q96JJ6 628 aa14□□□□□ -0.17
PCNX1-204ENST00000553428 SHROOM2Q13796 1616 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms